Desulfolutivibrio sulfoxidireducens: GD604_14125
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Entry
GD604_14125 CDS
T06821
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
dsx
Desulfolutivibrio sulfoxidireducens
Pathway
dsx00470
D-Amino acid metabolism
dsx00550
Peptidoglycan biosynthesis
dsx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dsx00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GD604_14125 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GD604_14125 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dsx01011
]
GD604_14125 (murD)
Enzymes [BR:
dsx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
GD604_14125 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
dsx01011
]
Precursor biosynthesis
Amino acid ligase
GD604_14125 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
NAD_binding_8
FAD_binding_3
AlaDh_PNT_C
Pyr_redox_2
2-Hacid_dh_C
DAO
Pyr_redox
Thi4
FAD_oxidored
TrkA_N
NAD_binding_7
GIDA
XdhC_C
HI0933_like
3HCDH_N
Pyr_redox_3
AdoHcyase_NAD
FAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QLA20770
LinkDB
All DBs
Position
complement(3233946..3235274)
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AA seq
442 aa
AA seq
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MRDMVHASQLAGHTAVVVGAGASGRAAARLLARLGAWVRLVEKNPAAVPADFREAAASRG
IEIVTGGHAPGHFAGADLVVVSPGVSRASLAPYLSACPGVQILAELELASWFVSAPMVAV
TGTNGKTTTVMLISHLLKASGLSVFTGGNIGTPLSEYVLAGEAADVCVLETSSFQLQGVA
TFRPHVAVLLNFSANHLDWHANMDEYLAAKLKIFAMQGTSDLALVPEELSYLLAGREFTK
ARIETFAPSDRFRCPRLLGRHNQADMEAAYAACRTFGVTEEAAKKAFFDFAPAPHRLQVV
GEKRGVVFVDDSKGTTVTAMRAAIESFDRPVWLLAGGVFKGGDLAGLVPLLRQRVKGVGL
FGQSREIFEQAWAGAVPLSWSPTLRQAVEKLYAKAAPGEVVLLSPATSSFDLYSDYKARG
GDFQAIFATLAGEPESRDREGQ
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcgggacatggtgcacgcgtcgcaactggccggacatacggctgtggtggtcggggcc
ggggcctcgggccgggccgccgcgcggcttctggccaggctcggggcctgggtgcgcctg
gtggagaaaaacccggccgcggtcccggccgattttcgcgaggccgccgcaagccggggt
atcgagatcgtgaccggcgggcatgccccgggacatttcgccggggccgatctggtggtc
gtaagccccggcgtctccagggcctccctggccccgtacctctccgcctgcccgggcgtc
cagatcctggccgaactggaactggcctcctggttcgtcagcgcgcccatggtggccgtc
accggcaccaacggcaagaccaccacggtcatgctcatcagccacctgctcaaggcctcg
ggcctttcggtcttcaccggcggcaacatcggcacgcccctgtccgaatacgtcctggcc
ggggaggccgccgacgtgtgcgtccttgagaccagcagcttccagctccagggcgtggcc
accttccgtccccacgtggccgtgctgctcaacttctcggccaaccacctggactggcac
gcgaacatggacgaatacctggcggccaagctcaagatcttcgccatgcagggaacctcc
gacctggccctggtcccggaggaactgtcgtacctgcttgccggccgtgagttcaccaag
gcccgcatcgaaaccttcgccccctcggaccgcttccgctgcccacgcctgctcggccgc
cacaaccaggccgatatggaggccgcctacgccgcctgccggaccttcggggtcaccgag
gaggcggccaaaaaggcctttttcgacttcgccccggccccgcaccggcttcaggtggtg
ggcgaaaaacgcggcgtggtctttgtggacgattccaagggcaccacggtcacggccatg
cgcgcggccatcgagtccttcgaccgacccgtgtggcttctggccggcggggtgttcaag
ggcggcgacctggccggactggttccgcttttgcggcagcgggtcaagggcgtggggctt
ttcggccaaagccgggagatctttgaacaggcctgggccggggccgtgcccctttcctgg
tcgcccaccctgcgccaggccgtggaaaaactctacgcgaaggccgccccgggcgaggtc
gtcctgttgtccccggccacgtccagcttcgacctctactccgattacaaggcccgggga
ggcgatttccaggccattttcgctacgcttgcgggagaacccgaatcccgggaccgggag
gggcaatga
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