Desulfitobacterium hafniense Y51: DSY1341
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Entry
DSY1341 CDS
T00333
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dsy
Desulfitobacterium hafniense Y51
Pathway
dsy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DSY1341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsy03400
]
DSY1341
Enzymes [BR:
dsy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DSY1341
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DSY1341
DNA repair and recombination proteins [BR:
dsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DSY1341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
BAE83130
UniProt:
Q24XW2
LinkDB
All DBs
Position
1580262..1581083
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AA seq
273 aa
AA seq
DB search
MPELPEVETIRRSLSQHILERRIEEILIRWPGAVEGYEEKTFADAVRGLKFQSIERRGKY
LLFTLEEGWSFIAHMRMTGRMVYHAQSQEPEKHTHVVLKLSSGEIHFTDTRKFGRLQLVR
TEERLQQPSLARLGPEPLEEGFSAAELGRRLAPRKLAIKAALLDQTLVAGIGNIYADEAL
FRAGIAPERCANSLTKEEIEKLYPAICQVLEEGIAANGTSFRDYQDANGERGDFQKELKV
YGRGGEPCKECGHTLVRIRLAGRSTVFCPCCQV
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactaccagaagtagaaaccatacgcagaagcctgagtcagcatattcttgag
cgaaggattgaggagatcttaattcgctggccaggtgctgtggaaggatatgaggagaaa
acctttgccgatgctgtcagagggctgaagtttcaaagtatcgaaagacgtgggaaatat
cttttgtttactttagaagaaggctggtccttcatcgcccatatgcgcatgacagggcgc
atggtttaccatgctcaaagccaggaaccggagaagcatacccatgtggtgcttaagcta
tcttccggggagattcactttaccgatacacgcaaattcggccggctgcagttggtgaga
acagaagaacgcctccagcaaccctccttagcccgcctgggtccggaacctttggaggaa
ggtttttccgccgcagaactgggacggcgtctggctccccgcaaactggccattaaagca
gctctgttggatcagacccttgtggcgggaatcggcaatatctatgcggatgaagcctta
ttcagagcgggaattgccccggagcggtgcgccaattccttgacgaaagaggagattgag
aagctttaccctgccatctgtcaggttcttgaggagggtatcgccgccaatggcacttct
ttccgggattaccaggatgccaatggggaaagaggggactttcagaaggaattgaaggtc
tatggacgtgggggagaaccctgcaaagagtgcggccatactctggtgagaattcgtctg
gccggcaggtctacggtgttttgcccttgctgtcaggtgtaa
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