Desulfitobacterium hafniense Y51: DSY1941
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Entry
DSY1941 CDS
T00333
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
dsy
Desulfitobacterium hafniense Y51
Pathway
dsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSY1941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsy03019
]
DSY1941
Messenger RNA biogenesis [BR:
dsy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DSY1941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF7669
Motif
Other DBs
NCBI-ProteinID:
BAE83730
UniProt:
Q24W62
LinkDB
All DBs
Position
complement(2235139..2236713)
Genome browser
AA seq
524 aa
AA seq
DB search
MCLGGENYLELTELIFIVVAVVVSLFVGGFIGWLIRKSAAEKLIGSAEEEAKRVIDNAQG
AAEAKRREAVIAAKEEVMHIRNEVEKESRERRNEIQRMERRVIQKEESLDRKMESLERKE
DNLHRKEEEVDQLKEVLTQTVAKEKQELERVSGLSTEEAKQILLQSVEEEVRYESAIMIK
DIETKAKEEAEKRAKNIISLAIQRCAADHVAESTVSVVALPSDEMKGRIIGREGRNIRTL
ETLTGIDLIIDDTPEAVILSGFDPIRREVARVALEKLIADGRIHPARIEEMVEKSQKEVD
QRIREEGEQATFETGVHGLHPEIIRLLGRLKFRTSYGQNVLKHSMEVSHLAGLMAAELGV
DVQLAKRAGLLHDLGKAVDHDTEGTHVQIGVDLAKKYKESWEVIHAIEAHHGDVEAKTIE
AVLVAAADAVSAARPGARRETLESYIKRLQKLEEIADTYDGVEKSYAIQAGREIRIIVRP
DKIDDVLAPKVAREISKRIEDELEYPGQIKVVVIRETRAVDYAK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttaggaggtgaaaactacttggaactaactgaattaatctttattgttgtagca
gtcgtggtatccctttttgtgggtggttttataggttggcttattcgtaagagtgccgcg
gaaaagctcatcggctcagctgaagaagaggcaaaacgggtcatcgacaatgctcagggt
gccgctgaggccaaacgccgtgaagctgtcattgccgctaaagaagaagtcatgcatatc
cgcaatgaagtggaaaaagaatcacgggaacgccgcaacgagattcagcggatggagaga
cgggttattcaaaaagaagagtctttagaccgcaaaatggagtctttggagcgcaaggaa
gataatcttcatcgtaaagaagaagaagtggatcagctcaaagaggtcctgacgcaaact
gtagccaaagaaaaacaagaattagaacgggtctctggtttatccactgaagaagcgaag
caaatcctgctgcaaagtgtggaagaagaagttcgttacgaatccgctattatgattaaa
gatattgagacgaaggctaaggaagaagcagagaagcgggctaagaacattatctctttg
gcaattcagcgttgtgctgcggatcacgtcgccgagagcacggtgtctgtggtggccctg
cccagtgatgagatgaagggacgcattatcggacgggaaggacgcaatattcggactctg
gagaccttaacaggtatcgatctgattattgatgatactcccgaagcggtcattctctct
gggtttgaccccatccgcagagaagttgcccgggttgccctggaaaaactgattgccgat
ggacggattcacccggctcgcatcgaagaaatggttgagaaatctcaaaaagaggtggat
cagcgtattcgtgaagaaggagagcaagctacctttgaaaccggagtgcatggcttacat
cctgaaatcattcgcctcttaggacgattgaagtttagaaccagttatggtcaaaatgtc
ctcaagcattctatggaggtatcccatttggcaggtttaatggccgccgaactgggggtc
gatgtacagctggccaagcgggcaggtttgctgcatgacttaggcaaagctgtggatcac
gatactgaagggactcatgttcagatcggtgtcgatctagcgaagaagtataaggaatct
tgggaagttattcatgctattgaagctcatcatggtgatgttgaagcgaagaccatcgaa
gcagtcttagtggctgccgccgacgcagtctcagctgctcgcccaggagctcgccgtgag
actctcgaatcctatatcaagcgcctgcagaagctggaagagattgccgacacctatgat
ggtgtggaaaaatcctacgcgattcaagcaggacgtgagattcgaatcatcgtcagacca
gataagatcgatgatgttctggctccgaaagtggctcgggaaatcagtaaacgcattgag
gatgaattagaatatccaggtcaaatcaaggttgtcgtcattcgtgaaactcgtgccgtg
gattatgccaaataa
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