Desulfitobacterium hafniense Y51: DSY3459
Help
Entry
DSY3459 CDS
T00333
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dsy
Desulfitobacterium hafniense Y51
Pathway
dsy03420
Nucleotide excision repair
dsy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DSY3459
03430 Mismatch repair
DSY3459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsy03400
]
DSY3459
Enzymes [BR:
dsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSY3459
DNA repair and recombination proteins [BR:
dsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSY3459
MMR (mismatch excision repair)
Other MMR factors
DSY3459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
UvrD_C_2
AAA_19
Viral_helicase1
DEAD
PhoH
AAA_16
SLFN-g3_helicase
nSTAND3
T4_Gp59_N
B-block_TFIIIC
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BAE85248
UniProt:
Q24RU4
LinkDB
All DBs
Position
3929517..3931763
Genome browser
AA seq
748 aa
AA seq
DB search
MEQELENRRLEQTLAIVEEQLAAARLRSEDNKAEILAAKQEMREDTSHSISGLWSMDNFH
ALVELSQYANPVSAKVSEYERDANKILILEKLLDSPYFARLDFTFADEESPEQIYIGRSS
LQDDKTHDITIYDWRSPIASVFYRFGTGEAFYESPGGRISGTVSLKRQYEIHKGKLEYFF
DADRQIMDEFLRKLLSQNTSPTMKTIVETIQQDQDRVIRDLEMELLMVQGAAGSGKTSVA
LHRVAYLMYQGLATKLSNNDIVIISPHTLFAKYIANVLPELGESNVHSLVVDEILRKVLQ
RETIQTRNQFLESLLSPGRSQDSPQKRMLLKNSLAFKASSQFTEILKRFIADLPQRWNRF
SDIYYDGKCLASRQLLKAQLLKDQKRTPAPLSYSLQHLEKSILKSVHKQRAHRLEKLKTF
IGERTGQEFAVEERARRLSLLESTALLKQIEKFTQFDCAELYQKLFSDKPYFYRLAKGLE
LPDCIEEIIDFTCANLNRDVLAYDDALALTFLHLKTKGYNGYQGIKQVVIDEAQDYDPLH
FEIFQALFPQSRYTILGDIKQTIGKQEDLSLYDRARQIFNKQHSALVTLDKSFRCTKEIL
EYSTRFLEPSFKLNSFSRKGDPPAVLTAPDQESLDQLIIKEINACREKGYPSIGLICKTE
QDAGSLYERLKEQVPLQLIRNDVEMELKGVFAIPVYLSKGLEFDAVLICDADQEHYDSED
DKNLLYIACTRALHRLNLFYTGDISPLL
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagaattggaaaacaggcgtctggaacaaaccctagccatcgtcgaggaacaa
ttggctgcagccagactaaggagcgaggataataaggctgagatacttgccgccaagcag
gaaatgcgggaagatacctctcattccatctccggcctctggtccatggataattttcac
gcccttgtggagttaagccagtacgccaatcccgtgtcggcaaaagtctccgaatatgaa
cgggacgccaacaagatcctgatcctggaaaagttgcttgattcaccttactttgcccgc
ctggattttacgttcgctgacgaggaatccccggagcagatttatatcgggcggtcttcc
ctccaggatgacaaaacccatgacatcactatctatgactggcgatcacccatcgccagt
gtcttttaccgtttcggcacaggggaagccttctatgaatctcccggcggcagaataagc
ggaacggtcagcttaaaacgtcaatatgagatccataaagggaaactggagtattttttt
gacgcagatcggcaaatcatggatgagttcctgcgcaagctgctttcccagaatacttcc
ccgaccatgaaaaccatcgtcgagaccatccagcaagaccaggatcgggtgatccgcgat
ctggaaatggaattgctgatggtccagggagctgccggcagcggcaaaacctccgttgcc
ctccatcgcgtcgcctatctgatgtatcagggtctcgcgactaagttatccaacaacgac
atcgtcattatctccccccataccctctttgcaaagtacattgccaacgtcctgcccgaa
ctgggagagagcaatgttcattctttggtagttgatgaaatactgcgcaaagtgctgcag
cgggaaaccatccaaaccaggaatcaatttctggaatccctgctctcccccggccgctcc
caagacagccctcaaaagagaatgctcctgaaaaacagcctggcctttaaagcttcgagc
cagttcactgagatcttaaagcgttttattgccgacttgccccagcgctggaaccggttc
agcgatatctattatgacgggaagtgcctggccagccggcaactcttaaaagcacaactc
cttaaagaccagaaacggactcctgctcccttgagctattccctgcagcacctggagaaa
tccattttaaaatccgtccacaagcagcgcgcacatcgtctggaaaagctgaaaaccttc
attggggaacggaccgggcaggagtttgccgtggaagaaagggcccgcaggttatcactt
ctggaaagcaccgctttgcttaagcaaatagagaaattcacccagttcgattgtgccgaa
ctttatcaaaagctcttcagtgacaaaccttatttttatcgtttggccaaaggcttggag
ctgcccgactgtatagaggagattattgactttacctgtgccaatcttaaccgggatgtc
ctggcttatgatgacgccctggccttaacctttctccacctgaagacaaaaggttataac
ggctatcaagggatcaagcaggtggttatcgacgaagctcaggattatgatcctcttcat
tttgaaatctttcaggctctgtttccccaatcccgctataccattttaggggatatcaag
caaaccatcggcaagcaggaagatctatccctttacgaccgggcaaggcaaatattcaat
aagcagcactcagccctggtaaccttggataaaagcttccgctgcaccaaggagatctta
gagtacagcaccaggtttctcgagccaagctttaaactcaacagcttcagcagaaaaggc
gatcctccggccgtcctgaccgctcccgatcaagagagtctcgatcagctgatcattaag
gagattaacgcttgccgggaaaagggatatccatccatcgggttaatctgcaaaactgag
caagacgccggctctctgtatgagcggctgaaggagcaggttcctcttcagttgatcaga
aacgacgtggagatggagttgaaaggtgtgttcgccatccccgtctatttatcaaaaggc
ctggagtttgacgctgtactcatctgcgatgccgatcaagagcattatgacagtgaagat
gacaaaaatcttctctatatcgcctgcaccagagccctgcaccggctcaacctgttttac
accggggatatcagccccttgctctaa
DBGET
integrated database retrieval system
