Dyella terrae: DYST_00004
Help
Entry
DYST_00004 CDS
T08348
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dta
Dyella terrae
Brite
KEGG Orthology (KO) [BR:
dta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dta03016
]
DYST_00004
Enzymes [BR:
dta01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DYST_00004
Transfer RNA biogenesis [BR:
dta03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DYST_00004
Prokaryotic type
DYST_00004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ULU23114
LinkDB
All DBs
Position
4190..5122
Genome browser
AA seq
310 aa
AA seq
DB search
MKRRIRFRDLHGIVLLDKPLGLSSNEALQVVRKGIFRAEKGGHTGALDPLATGLLPLCFG
EATKLAGMLLGSRKAYLAECKLGATTSTADLEGEIVLERPVPMLSDAAIEAALVNLRGRI
TQVPPAYSAIKRDGERLYVKARRGEAVEVPAREVDVYRLDMLSRSDDSLTLYVECGSGTY
VRSLAVDLGENLGCGAHLTALRRLWVEPFRESAMVTVEQLQAAAERGDDALLALLLPVSA
GLEGLPALRLDAEQTLAVSQGQQIPLDPSMSGQVAVFAEDGRLLVLGEAGGGKLHIVRGF
NLPSTVQLRS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtcgtatccgttttcgcgacctgcacggcatcgtgttgctggacaagccgttg
gggctgagctccaacgaggccttgcaggtggttcgcaaaggtattttccgggcggagaag
ggcggccacacgggcgcactcgatccgctggccaccggcctgttgccactgtgcttcggc
gaggccaccaagcttgccggcatgctgctgggctcgcgcaaggcttatctggctgagtgc
aagctgggtgctaccaccagtacggctgatctcgagggcgagatcgtgctggaacgacca
gtgcccatgctctcggacgcggctattgaggccgcgctggtcaatttgcgtggacgcatc
acccaggtgccgccggcttattcggccatcaagcgggatggtgagcggctttacgtcaag
gcgcgacgtggcgaggcggtcgaggtgcccgcacgcgaagtggatgtgtatcggctggat
atgctctcccgctcggacgatagcctgaccctctatgtcgaatgcggttccggcacctac
gtgcgtagcttggccgtggacctgggcgaaaacctgggttgcggagctcacctgacggcc
ctgcgccgcctgtgggtggagccgttcagggagtcggccatggtgacggttgagcagctt
caggcggcagcagagcggggtgacgatgccctgctggcgttgttgttgccggtgtcggcc
gggctggagggcttgccagcgttgaggttggatgcggaacagaccctggccgtctcacag
ggtcagcagattccgcttgatccttcgatgagcgggcaggttgcagtgttcgccgaggac
ggtcgcctgctggttctgggcgaggcggggggcggaaagctgcacatcgtgcggggtttc
aatctaccctcgaccgtccagcttcgcagttga
DBGET
integrated database retrieval system
