Dyella terrae: DYST_01227
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Entry
DYST_01227 CDS
T08348
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dta
Dyella terrae
Brite
KEGG Orthology (KO) [BR:
dta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dta03009
]
DYST_01227
Enzymes [BR:
dta01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DYST_01227
Ribosome biogenesis [BR:
dta03009
]
Prokaryotic type
ribosomal protein modification factors
DYST_01227
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
ULU24314
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All DBs
Position
complement(1443712..1445031)
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AA seq
439 aa
AA seq
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MSQVSPKVGFVSLGCPKALVDSERILTQLKVEGYEIVPSYGAADAVVVNTCGFIDAAVQE
SLDAIGEALHENGKVIVTGCLGKRSELIREAYPDVLAITGPQDYASVMNAVHSALPPQRN
ALLDIIPDTGIKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVDEVLVEAERLVK
GGVKELLVISQDTSAYGVDMKYAERQWRDKSYRTRMTELCEGLSELGVWTRLHYVYPYPH
VDEVMPLMAEGKILPYLDIPFQHASPRILKLMKRPGNIDKTLERIRNWRKVVPDLTIRST
FIVGFPGETDAEFEELLDFLREAELDRVGAFAYSPVDGAKANELPGAVSEELKEDRLEQF
MAVQAEISAAKLQRKIGRTVKVLVDEAGANGAVARSAADAPEIDGVVHIANGQLLKPGQF
VDVVIEDADEHDLHARLAG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaggtttcgcccaaagtcggtttcgtcagcctgggttgtcccaaggccctcgtg
gattccgagcgcatcctcacccagttgaaggtcgagggttacgagatcgtgcccagctac
ggtgccgccgatgcggtggtggtcaacacctgtggttttatcgatgcggccgtgcaggaa
tcgctggacgccatcggcgaggcgctgcacgagaacggcaaggtgatcgtcaccggttgc
ctgggcaagcgctccgagctgattcgcgaggcgtatccggacgtgctcgccattacgggg
ccgcaggattacgccagcgtgatgaacgccgtgcactcagcattgccgccccagcgcaac
gcgctgctggacatcattccggacacgggcatcaagctcacgccgaagcactatgcgtac
ctgaagatttccgaaggctgcaaccaccgttgcagcttctgcatcatcccgtcgatgcgc
ggcgatctggtgtcgcgcccggtagacgaggtgctggtggaagccgagcgcctggtgaag
ggtggcgtgaaggaactgctggtgatctcgcaggacaccagcgcctacggcgtggacatg
aagtacgccgagcgccagtggcgcgacaagagctaccgcacgcgcatgacagagctgtgc
gaaggcctctccgaacttggcgtgtggacgcgcctgcactacgtctacccgtacccgcac
gtggacgaagtgatgccgctgatggcggaaggcaagatccttccgtacctcgacattccg
ttccagcacgccagcccgcgcatcctcaagctgatgaagcgcccgggcaacatcgacaag
acgctggagcgcatccgcaactggcgcaaggtggtgcccgacctgaccattcgcagcacc
ttcatcgtcggcttccccggcgagacggacgccgagtttgaggagctgctggacttcctg
cgcgaagccgaactcgatcgcgtgggcgcgttcgcctactcgccggtggacggcgccaag
gccaacgagttgccgggcgcggtgtcggaagagctcaaggaggatcgcctggagcagttc
atggcggtgcaggcggagatttccgccgccaaactgcaacgcaagatcggccgcactgtg
aaagtgcttgtcgatgaagccggcgccaacggtgccgtcgcgcgttctgcggctgatgcg
ccggagatcgacggcgtggtgcacatcgccaacgggcagttgctcaagccgggtcagttc
gtcgacgtggtgattgaagacgccgacgagcacgacttgcacgcgcgcttggccggctga
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