Dyella terrae: DYST_01735
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Entry
DYST_01735 CDS
T08348
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dta
Dyella terrae
Pathway
dta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DYST_01735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dta03019
]
DYST_01735
Enzymes [BR:
dta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DYST_01735
Messenger RNA biogenesis [BR:
dta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DYST_01735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
DEDD_Tnp_IS110
Flavi_DEAD
CMS1
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
ULU24815
LinkDB
All DBs
Position
2000382..2001704
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AA seq
440 aa
AA seq
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MSFESLGLEPALLRALAEQGYANPTPIQAAAIPVVLEGGDLLAAAQTGTGKTAAFSLPLL
HRLSKTAPAGTRRPRALILTPTRELAAQVHDNLRDYGKHLRISSTTIFGGVSMGPQVQAL
RRGVDIIIATPGRLIDHMQQRSVDLSGIDVLVLDEADRMLDMGFLPALKRILAAVPKHRQ
TLLFSATFAPPIKALAMQFMHQPREVSVTPPNTVANTVTHHVHPVDAAKKRDLLLHVLSQ
DSRRQTLVFSRTKHGADKLVTFLSAAGMRAAAIHGNKSQNARTRALSDFKTGRVTVLVAT
DIAARGIDIDQLPIVINFDLPMVAEDYVHRIGRTGRAGAEGKAVSLVSHDESGLLRDIRK
LLKQDIAFSDVPGFEPSHPLRTDAAAPRPVQGQRQPQQRQGRPQGSHRPHGHHGGHSQGG
DRPAEGNRKRQRRGRPAAKA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgaatcgttgggccttgagcccgcgttgttgcgtgcgcttgccgaacagggc
tacgccaaccccactcccattcaggctgccgctattccggtggtactggaaggcggagac
ctgcttgccgccgcccagaccggcaccggcaagacggccgccttctcgctgccgttgctg
caccgcctgtcgaaaacagcgcccgccggcacacgccgtccgcgcgccctcatactcacg
ccgacgcgtgaactcgccgcccaggtgcatgacaacctgcgtgactacggcaagcacctg
cgcatcagcagcaccaccatcttcggtggcgtgagcatgggcccgcaggtgcaggcactg
cgtcgcggtgtggacatcatcatcgccacgcctggccgccttatcgaccacatgcagcag
cgctccgtggatctctccggcatcgacgtgctggtgctggacgaagccgaccgcatgctc
gacatgggcttcctgccggccctcaagcgcatcctcgcggcggtgccgaagcatcgccag
acgctgttgttctcggccaccttcgcgccaccgatcaaagcgctcgccatgcagttcatg
caccagccgcgcgaagtatcggtaacgcccccgaacaccgtggccaacaccgtcacgcac
catgtgcacccggtggacgcagccaagaagcgcgacctgctgctgcacgtgctctcgcag
gacagccgtcgccagacgctggtgttcagccgcaccaagcacggcgccgacaagctggtg
acgttcctgagtgccgccggcatgcgtgccgccgccatccatggcaacaagagccagaac
gcccgcacgcgcgccctgagcgacttcaagaccggccgcgtcaccgtgctggtggcgacc
gatatcgcggcacgtggcatcgacatcgatcagctgcccatcgtgatcaacttcgacctg
ccgatggtcgcggaagactacgtgcaccgcattggccgcaccggccgtgccggtgccgag
ggcaaggccgtgtcgctggtgagccacgatgaatcgggcttgctgcgtgacatccgcaag
ctgctcaagcaggacatcgccttcagcgacgtgccgggcttcgagccgtcgcacccgctg
cgtaccgacgccgccgcaccgcgtccagtgcagggccagcgccaaccccagcagcgccag
gggcgcccgcagggttcgcatcgcccgcatggtcatcacggtggtcacagccaaggcggt
gatcgtccggccgaaggcaatcgcaagcgccagcgtcgcggccgtccggctgcaaaggcc
taa
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