Dyella terrae: DYST_01740
Help
Entry
DYST_01740 CDS
T08348
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
dta
Dyella terrae
Pathway
dta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DYST_01740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dta03019
]
DYST_01740
03009 Ribosome biogenesis [BR:
dta03009
]
DYST_01740
Enzymes [BR:
dta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DYST_01740
Messenger RNA biogenesis [BR:
dta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DYST_01740
Ribosome biogenesis [BR:
dta03009
]
Prokaryotic type
rRNA helicases
DYST_01740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
adh_short
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ULU24820
LinkDB
All DBs
Position
2004808..2006691
Genome browser
AA seq
627 aa
AA seq
DB search
MSSPSSDSQPAAVGFAALGLHPELLRALTDVGYESPSPIQAATIPPLLEGRDVLGQAQTG
TGKTAAFALPILSRIDLKPGKPQALVLAPTRELAIQVAEAFQRYATHMPGLQVLPIYGGQ
SYGPQLHSLKRGVQIVVGTPGRVIDHLERGTLDLSELKFLVLDEADEMLRMGFIDDVEKV
LQATPPERQVALFSATMPSQIRKIAQQHLKDPREVTIKSSTTTAANIRQRYWFVSGMHKL
DAMTRILEAEPFDAMIIFARTKSATEELAEKLQARGLAAAAINGDIAQAQRERVIQQLKD
GKLDILVATDVAARGLDVERISHVMNYDIPYDTESYVHRIGRTGRAGRSGEAILFVTPRE
KGMLRAIERATRQPIEEMKLPTVEAVNDVRIAKFKQRISDTIAVGELGLFQQLIEQYEQE
HNIPAVEIAAALARIAQGNQPLLLTPPPKREFTPREPGREREHSRDRGDREHRGEREQRP
RDRDRDAGPRDFTPRPVRPHHTEEGKSTYRIEVGHEHGVKPGNIIGAIANEAGLESQHIG
RLSIRGEYSLIDLPAGMPAEVFQHLQKVWVSQQQLRIREWDGNDSGASEAPPHRPGGGNR
PGGFKKPGGKPKPHGHGGGNKGPRRGK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccccgtcttccgattcccagccggcagccgtcggctttgctgcgcttggcctc
catccggagctgctgcgcgcactcaccgacgtcggctatgaatcgccttcgccgatccag
gccgccaccattccgccgctgctggaaggtcgcgacgtactcggccaggcgcagaccggc
accggcaaaactgccgcgtttgcgctgccgatcctgtcgcgcatcgacctcaagcccggc
aagccgcaggcactggtgctggcgcccacgcgcgaactcgccatccaagtggccgaagca
ttccagcgctacgccacccacatgccagggctgcaagtgctgccgatctacggcggccag
agctatggtccgcagctgcactcgctcaagcgcggcgtgcagatcgtggtgggcacgccc
ggtcgtgtcatcgaccatctggagcgcggcacgctggatctctccgagctgaaattcctg
gtgctcgacgaagccgacgaaatgctgcgcatgggcttcatcgatgacgtggagaaagtg
ctccaggcgacgccgccggagcgccaggtggcactgttctccgccaccatgccgtcgcag
atccgcaagatcgcccagcagcatctgaaagatcctcgcgaggtgacgatcaagtcgtcc
accaccacggccgcgaacatccgccagcgctattggttcgtcagcggcatgcacaagctc
gatgccatgacgcgcatcctcgaggccgaaccgttcgacgcgatgatcatcttcgcgcgc
accaagtcggcaaccgaggaactcgccgagaagctgcaggcgcgtggcctcgccgccgcc
gccatcaatggtgacatcgcacaagcgcagcgcgagcgcgtgatccagcagctgaaggac
ggcaagctcgacattctggtggccaccgacgtggccgcgcgtggtctcgacgtggaacgc
atcagccacgtgatgaactacgacatcccgtacgacaccgaaagctacgtgcaccgtatc
ggccgcactggccgcgcaggtcgcagcggcgaggctattttgttcgtgaccccgcgcgag
aaaggcatgctgcgcgcgatcgaacgcgctacgcgtcagcccatcgaagagatgaagctg
ccgacggtggaagccgtcaacgacgtgcgcatcgccaagttcaagcagcgcatcagcgac
accatcgcggtgggtgagctgggtctgttccagcagttgatcgagcagtacgagcaggaa
cacaacattcccgccgtcgagatcgccgctgcactagcgcgcattgcacagggcaaccag
ccgctgctgctcacgcctccacccaagcgcgaatttacgccgcgcgaaccgggtcgcgag
cgtgaacacagccgcgatcgtggcgatcgtgaacatcgcggtgaacgcgagcagcgtccg
cgcgaccgcgatcgcgatgcaggcccgcgtgatttcacaccacgtccggtgcgcccgcat
cacacggaagaaggcaagagcacctaccgcatcgaagtgggccacgagcatggcgtgaag
ccgggcaacatcatcggcgccatcgccaatgaagccggcctggaaagccaacacatcggc
cgcctgagcatccgcggcgaatacagcctgatcgacctgcctgccggtatgccggcggaa
gtgttccagcacctgcagaaggtgtgggtgagccagcagcagttgcgcatccgggagtgg
gatggcaacgacagcggcgccagcgaagctccgccgcatcggccgggcggtgggaatcgt
ccgggtggtttcaagaagccaggcggaaagcccaagccgcatgggcatggtggtggtaac
aagggtccgcgacgcgggaagtaa
DBGET
integrated database retrieval system
