Dyella terrae: DYST_03088
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Entry
DYST_03088 CDS
T08348
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dta
Dyella terrae
Brite
KEGG Orthology (KO) [BR:
dta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dta03032
]
DYST_03088
03400 DNA repair and recombination proteins [BR:
dta03400
]
DYST_03088
Enzymes [BR:
dta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DYST_03088
DNA replication proteins [BR:
dta03032
]
Prokaryotic type
DNA Topoisomerases
DYST_03088
DNA repair and recombination proteins [BR:
dta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DYST_03088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
HATPase_c_3
PNISR
UFD1_N2
Motif
Other DBs
NCBI-ProteinID:
ULU26143
LinkDB
All DBs
Position
complement(3433880..3436297)
Genome browser
AA seq
805 aa
AA seq
DB search
MNDTTYDSSNIKVLKGLEAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCDHV
TVTILDDGSVSVSDNGRGIPVDTHPEEGRSTAEVVMTVLHAGGKFDANSYKVSGGLHGVG
VSVVNALSSHLWLTIYREGKEYQQEYAHGEPQYPIKPVADSSKRGTTVRFLPSTGTFTNV
EFHYDILAKRLRELAFLNSGVTIDLKDERGEGRHDTFAYEGGIKSFVQHLAQLKTALHPN
VISLSANQDGISVELAMQWTDSYQETMFCFTNNIPQRDGGTHLTGFRAALTRSLQGYIEK
EGLAKNAKVALSGDDMREGLIAVLSVKVPDPKFSSQTKDKLVSSEVKTAVEQAVNEKLGE
FLLEHPNEAKAIASKVVDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALCE
LFLVEGDSAGGSAKQGRNRKTQAVLPLKGKILNVEKARFDKMLASAEVGTLITALGTGIG
KEEYNPDKLRYHRIVIMTDADVDGSHIRTLLLTFFYRQMPELIERGHIYIGLPPLYKIKQ
GKNEMYLKDDAALNGYLVSSAVDGAGLEPSADALAISGEPLEKLLRDYQIALDQIERLGH
RFDATVLTALLEHAPLEPALWNDSVAMLAWLKGVELRLAASGLGKPRYRLALRPAEGEQP
AAIEVVRDQHGLSHTWLLPQPFFGSAEFRPILHVSQQLAGLVQVDAVVRRGNGSRGVQSF
AEARHWLLEEGKKGRMIQRFKGLGEMNPEQLWETTVNPETRRMLQVGIEDAFAADQMFSM
LMGEAVEPRRDFIEANALKVANLDI
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatacaacctacgattcgagcaacatcaaggtcctgaaaggtctggaagcggtg
cgcaagcgccccggcatgtacatcggcgacaccgatgacggcaccggcctgcaccacatg
gtgttcgaagtcgtcgataactcgatcgacgaagctctcgctggttactgtgaccacgtg
accgtaaccatcctggatgatggctcggtcagcgttagcgacaacggacgtggcattccc
gtcgacacacatccggaagaagggcgttccactgcagaagtggtcatgacggtgctgcac
gcaggcggcaagttcgacgccaattcgtacaaagtgtccggcggcctgcatggcgtgggc
gtgtcggtggtgaacgcgctcagctcgcacctgtggctgaccatctaccgcgagggcaag
gagtaccagcaggagtacgcccatggtgagccccagtacccgatcaagccggtagccgac
tccagtaagcgcggcaccacagtgcgcttcttgcccagcacgggcacgttcaccaacgtg
gaattccactacgacatcctggccaagcgtctgcgtgagctggcgttcctcaactcaggc
gtcaccatcgacctgaaggatgagcggggcgaaggtcgccacgatacctttgcctatgag
ggcggcatcaagtcgttcgtgcagcacctcgctcagctcaagaccgcgctgcatcccaac
gtgatcagcctcagcgccaaccaggacgggatctcggtggagctggccatgcagtggacc
gactcctaccaggagacgatgttctgcttcaccaacaacatccctcagcgcgatggtggt
acccacctcacgggcttccgcgccgcattgacgcgctctctgcagggctacatcgagaag
gaaggcctggccaagaacgccaaagtggccctctcgggcgacgatatgcgcgaaggcctg
atcgccgtgctgtcggtgaaggtgcctgacccgaagttctcctcgcagaccaaggacaaa
ctcgtttcctccgaggtgaagaccgcggtggagcaggccgtcaacgaaaagctgggcgag
ttcctgctggaacacccgaacgaagccaaagccatcgcgtcgaaggtggtcgatgcggcg
cgtgctcgcgaggcagcccgcaaggctcgcgagatgacccgccgcaagggcgcgctggat
atcgccggcctgccgggcaagctggccgactgtcaggaaaaggatcccgcgctgtgcgaa
ctgttcctggtcgagggtgactccgcaggcggctcggctaagcagggccgtaaccgcaag
acgcaggccgtgcttccgttgaagggcaaaatcctcaacgttgaaaaggcccgcttcgac
aaaatgctggcctccgccgaagtcggcacgctgatcaccgcgctcggcacgggtatcggc
aaggaggagtacaacccggacaagctgcgctaccaccgcatcgtcatcatgaccgacgcg
gacgtggacggctcgcacatccgcacgctgctgcttacgttcttctatcgccagatgcca
gagctgatcgagcgtgggcacatctacattggcctgccgccgctctacaagatcaagcag
ggcaagaacgagatgtacttgaaggacgacgcggcgctcaacggctacctcgtctccagc
gccgtcgatggcgctgggctcgaaccctcggctgatgcactggcgatctccggtgaaccg
ctggagaagctgctgcgcgactaccagatagcgctagaccagatcgaacgcctcggtcat
cgcttcgatgccacggtactcaccgcactgctcgaacatgcaccgctggaaccggcgctg
tggaatgacagcgtggccatgctggcttggttgaagggtgtggaactgcgcttggccgcg
agtggtctgggcaaacctcgttaccgtctcgcgctgcgccctgcggaaggcgagcagccg
gccgccatcgaggtggtgcgtgatcagcatggcctgagccacacgtggctgttgccgcag
ccgttcttcggcagcgcggagttccgcccaatcctccatgtgagccagcagctggccggc
ctggtacaggttgacgccgtggttcgccgaggcaacggttcgcgtggcgtgcaaagcttc
gctgaagcgcggcactggttgttggaagagggcaagaagggccgcatgatccagcgcttc
aagggtctgggcgaaatgaatccggagcagctgtgggaaaccaccgtgaacccggaaact
cgccgcatgctgcaggtcggcatcgaagacgcttttgccgccgatcagatgttctcgatg
ctgatgggcgaggccgtggagccgcgtcgcgacttcatcgaagccaatgcactgaaggtc
gcaaacctggacatctaa
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