Dyella terrae: DYST_03214
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Entry
DYST_03214 CDS
T08348
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
dta
Dyella terrae
Brite
KEGG Orthology (KO) [BR:
dta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dta03009
]
DYST_03214
Enzymes [BR:
dta01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
DYST_03214
Ribosome biogenesis [BR:
dta03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
DYST_03214
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_37
Cons_hypoth95
Methyltr_RsmF_N
NSUN5_fdxn-like
Motif
Other DBs
NCBI-ProteinID:
ULU26269
LinkDB
All DBs
Position
complement(3572913..3574208)
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AA seq
431 aa
AA seq
DB search
MTDTRALAAQALADIALRGTSLRDAMERHAPKLADSRDRALLMALLSDGARWWLRFDPVL
DRLLEKPLRQKEPAVHALLVLGLVQLEILKLPEYAAVAATVQATRAMQRPRMAGLVNAVL
RRWQRERETLLAALDAKPQTRHAHPAWLAKALAHDWPEQSDAVMAADNVEPPLMLRVNQR
RTTRVSLVDRLRSDGYTADAHDWLADGIVLPHSTDVTRLPGFAAGEFAVQDGAAQIATDL
AELRDGQRVLDACAAPGGKACHLLERADVALTALEFDARRAQRITQNLERLGLSANLVIG
DAGQPSDWWDGTPFDRILIDAPCSATGVLRRRPDVRLHRRESDIATLAALQRRILDALWP
LLAPGGRLIYITCSMLRAENDVVVGEWLKTQVDARAIAFTLPVGQSAAVGWQVLPGEGDL
DGMYYAVLEKA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacacccgcgccctcgccgcccaagcccttgccgacatcgccttgcgcggaacc
tcgctgcgtgacgcgatggaacgacacgcaccgaagctggccgactcgcgcgatcgcgcg
ctgctaatggcgctgctcagcgacggtgcgcgctggtggctgcggtttgatcccgtgctc
gaccgcctgctcgagaagccgcttcgccagaaggagcctgcggtccatgccttgctcgta
cttggcctggtgcagttggaaatcctgaaactgcctgagtacgccgccgtcgccgccacc
gtgcaggccacgcgcgccatgcagcgcccccgcatggcgggtttggttaacgccgtgctg
cgccgctggcagcgcgaacgcgaaacgctgctggcagcactcgacgccaagccgcagacg
cgccatgcccacccggcgtggctggctaaggcgctggcgcacgactggccggagcagtcc
gacgccgtgatggcggccgacaacgtcgaaccgccattgatgctgcgcgtgaaccaacgc
cgcacgacgcgtgtgtcgctggtcgatcgcctgcgttcggacggctatacggccgacgcg
catgactggctcgcggatggcatcgtgctgccgcacagcaccgacgtcacccgcctgccc
ggctttgccgcaggtgagttcgccgtgcaggacggcgcggcccagatcgccactgatctt
gccgagcttcgcgacgggcagcgggtgctggatgcctgcgccgcgcccggaggtaaggcc
tgccacttgcttgagcgagccgacgtggcgctgactgccctggagttcgatgccaggcgt
gcgcaacgcatcactcagaacctggagcgactggggctttcggccaacttggttatcggc
gatgccggccagccgtccgattggtgggatggcacgcccttcgaccgaatcctgatcgac
gccccatgctccgccaccggcgtgctgcgccggcgacccgatgtacgcctgcatcgccgc
gaaagcgacatcgccacgcttgccgcgctgcaacgccgcatcctcgatgcgctatggcca
ttgctcgcaccgggcgggcgactcatttacatcacttgctcgatgctgcgcgctgaaaat
gacgtcgtcgtcggcgagtggctaaaaacacaggtggatgcccgtgccatcgccttcacc
ctgcccgtgggccagtccgcagcagtgggttggcaggtgctgccgggcgagggcgatctc
gacggcatgtactatgccgtccttgagaaggcctga
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