Dyella terrae: DYST_04219
Help
Entry
DYST_04219 CDS
T08348
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
dta
Dyella terrae
Pathway
dta00260
Glycine, serine and threonine metabolism
dta00460
Cyanoamino acid metabolism
dta00630
Glyoxylate and dicarboxylate metabolism
dta00670
One carbon pool by folate
dta00680
Methane metabolism
dta01100
Metabolic pathways
dta01110
Biosynthesis of secondary metabolites
dta01120
Microbial metabolism in diverse environments
dta01200
Carbon metabolism
dta01230
Biosynthesis of amino acids
dta01240
Biosynthesis of cofactors
dta04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
dta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DYST_04219
09102 Energy metabolism
00680 Methane metabolism
DYST_04219
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DYST_04219
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DYST_04219
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DYST_04219
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DYST_04219
Enzymes [BR:
dta01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DYST_04219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ULU27264
LinkDB
All DBs
Position
4653326..4654579
Genome browser
AA seq
417 aa
AA seq
DB search
MFPKHETIAGYDNELAQAMADEARRQEDHVELIASENYASPRVMEAQGSVLTNKYAEGYP
GKRYYGGCEFVDVAEKLAIDRLKQLFGATYANVQPHSGSQANQAVYLALLNPGDTILGMS
LAHGGHLTHGAKVNVSGKLFNAVQYGVNEQGLVDYDEVERLAVEHKPKMIVAGFSAYSQV
MDWARFRAIADKIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTSTTHKTLRGPRGGFIV
AKDAGEEIEKKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPEFKTYQAQVVKNAKAMAK
TFIERGYKIVSGGTENHLMLVDLIGRDVTGKEAEEALGKAHITVNKNAVPNDPRKPFVTS
GLRVGTPAVTTRGYKEADVVELTGWICDVLDAPNDDAVIAKVREKVTAQCHTFPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgaagcacgagacgatcgccggttacgacaatgaactggcacaggctatggcc
gacgaagcccgccgtcaggaggatcacgtcgagctgatcgcttcggagaactacgccagc
ccccgcgtgatggaagcccagggcagcgtgctcaccaacaagtacgccgaaggttatccg
ggcaagcgctattacggcggctgcgagtttgtggacgtggccgagaagcttgccatcgat
cgcctcaagcagctgttcggcgctacctatgccaacgtgcagccgcattcgggttcgcag
gctaaccaggccgtgtacctggcgctgctcaacccgggcgacaccatcctcggcatgagt
ctggcccacggcggccacctcacccacggcgccaaggtcaatgtgtccggcaagctgttc
aacgccgtgcagtacggcgtgaacgagcagggcctggtggactacgacgaagtcgagcgt
ctcgccgtcgagcacaagccgaagatgatcgtcgccggcttcagcgcctactcgcaggtg
atggactgggcgcgtttccgcgctatcgctgacaagatcggcgcttacctgttcgtggat
atggcgcacgtcgccggcctgatcgccgcaggcgtgtacccgaacccggtgccgcacgcg
cacgttgtcacctccaccacgcacaagaccctgcgcggcccgcgaggtggtttcatcgtg
gcaaaggacgccggcgaagagatcgagaagaagctgcagtccatcgtgttccccggtatc
cagggtggaccgctgatgcacgtcatcgccgccaaggcagtggccttcaaggaagcgctg
gagccggagttcaagacctaccaggcacaggtggtcaagaacgccaaggccatggccaag
accttcatcgagcgcggctacaagatcgtctccggtggcaccgaaaaccatttgatgctg
gtcgacctgatcggtcgcgacgtgaccggcaaggaagcggaagaggcgctgggcaaggcg
cacatcaccgtcaacaagaacgccgtgccgaacgacccccgcaagcccttcgttacctcg
ggtctgcgcgtgggtacgccagccgtcaccacccgcggctacaaggaagcggatgtggtc
gaactgaccggttggatctgcgacgtgctggatgcgccgaacgatgacgctgtcatcgcc
aaggtgcgcgagaaggtcacggcgcagtgccatacgttcccggtgtacggctga
DBGET
integrated database retrieval system