Dyella terrae: DYST_04616
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Entry
DYST_04616 CDS
T08348
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
dta
Dyella terrae
Pathway
dta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DYST_04616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dta03019
]
DYST_04616
Enzymes [BR:
dta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
DYST_04616
Messenger RNA biogenesis [BR:
dta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DYST_04616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ULU27651
LinkDB
All DBs
Position
5040658..5042019
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AA seq
453 aa
AA seq
DB search
MNHDARTNATPALRIIPREQHVISRKNISKAALRVLYRLNEAGYQAYLVGGAVRDLLLGG
HPKDFDVATSATPDEVKKLFRNCRLIGRRFRLAHVVYGPEIIEVATFRGTGEEEGEGDRH
IVDGRIVRDNVWGTIEEDALRRDFRVNALYYDISDFSVRDYVGGMQDVQDRVLHLIGDPA
TRYREDPVRMLRAVRLAAKLDFRIDTAAAAPFAELGPLLADAAPARLFDESLKMFLSGHG
LKSFRMLEQTGLLKFMFPATARALKRGDEALRALVEQGLANTDARVAEGKSVTPAFLFAV
LLWGEVRDLAHTWMTKDMEPVAAWERAATHVIAEQCQRVAIPRRFTLTMEEIWGMQPRFE
QVQRKRVFRLMTHPRFRAAFDFLLLRAAESPAVRQLGEWWDHAQQLPPETLAAALASGGA
SGGAIESNTPAPKPRKRRRRKPTSKSGGKSDQA
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcacgacgcaaggaccaacgccacgcctgcattgcgcatcattccgcgcgagcag
cacgtgatttcgcgcaagaacatcagcaaggcagcactgcgcgtgctctaccgccttaat
gaggcaggctatcaggcctatctcgtggggggcgccgtgcgcgatctcctgttgggcggg
catcccaaggatttcgacgtggccaccagcgccacgccggacgaggtcaagaaactcttc
cgcaactgtcgcctgatcggacgccgcttccgtctggcccatgtggtgtatgggccggag
attatcgaggtggcgacgttccgcggcaccggcgaggaagagggcgagggtgaccgccat
atcgtagacggccgcatcgtgcgcgataacgtgtggggcacgattgaagaagacgcgttg
cgtcgcgacttccgcgtcaacgcgctttactacgacatcagcgacttctcggtgcgcgat
tacgtgggcggcatgcaggacgtgcaagaccgcgtgttgcatctgatcggcgatccggcc
acccgttaccgcgaagacccggtgcgcatgctgcgcgccgttcgtctcgccgccaagctc
gatttccgcatcgatactgcggcggccgcgccgttcgccgagttgggcccgctgctggcc
gatgccgcgccggcgcggctgtttgacgaatcgctgaagatgttcctttccggccacggc
ctcaagagcttccgcatgctcgaacagacgggcctgctgaagttcatgttcccagccacg
gcgcgcgcgctcaagcgcggtgacgaggcgctgcgcgcactggtcgaacaggggctggcc
aacactgatgcccgcgtggccgaaggcaagtcggtgacgccggccttcctgttcgccgtg
ctgctgtggggcgaagtgcgcgatttggcccacacctggatgaccaaggatatggagcca
gtggccgcgtgggagcgtgccgcgacgcacgtcatcgctgagcagtgccagcgcgtggcc
attccacgccgttttacgctcaccatggaagaaatctggggcatgcagccgcgcttcgag
caagtgcagcgcaaacgtgtgttccgcctgatgactcatcctcgcttccgcgctgcgttc
gatttcctgctgttgcgcgcggccgaatcgccggcggtccggcagttgggtgaatggtgg
gatcacgcccagcagttgccgcccgaaacgctggcggcggctttggcgtcgggtggtgcc
tcgggtggagcgattgagagcaacacccctgcgcccaagccgcgcaagcggcgcaggcgc
aaaccgacctcgaagtcgggtgggaaatcggatcaggcgtga
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