Deinococcus taeanensis: LAJ19_02540
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Entry
LAJ19_02540 CDS
T09106
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dtae
Deinococcus taeanensis
Pathway
dtae03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dtae00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LAJ19_02540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dtae03021
]
LAJ19_02540
03400 DNA repair and recombination proteins [BR:
dtae03400
]
LAJ19_02540
Enzymes [BR:
dtae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LAJ19_02540
Transcription machinery [BR:
dtae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LAJ19_02540
DNA repair and recombination proteins [BR:
dtae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LAJ19_02540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
RNA_pol_L_2
IMS_HHH
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
UBV43119
LinkDB
All DBs
Position
512283..513284
Genome browser
AA seq
333 aa
AA seq
DB search
MDQKRPQLKARVDGDYGEFVLEPLTRGYGVTIGNPIRRILMSSIPGTAVTSVYIEDVLHE
FSTIPGVKEDVIQIILNLKELVVKFHASGPKTLTLRAQGEGVVKASAFEVPSDAEIVNPD
LVIANLAEDGKLVMEVRVEEGEGYVPADKHATKDRINSIPVDAVFSPVRRVAYHVENTRV
GQQTDLDRLILRVWTDGSTSPQDALDKAVEILRDELTVFGNVETLPAAAPEYQQPVYTPA
PTAPNVYDLPPSAASLNLNPGDYPAEMDSPRVTLEGLGLTTRVLHSLKEEGIDSVDALCA
LSDRDLKKVPGIGERSLDEIKQQLAQFGLALRD
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
gtggatcaaaagcgccctcaactcaaggcccgcgtggacggcgattacggcgaattcgtc
ctggagccgctcacgcgcggttacggcgtcaccatcgggaaccccattcggcgcatcctg
atgtcctccatccccggtactgctgtcaccagcgtgtacattgaggacgtcctgcacgag
ttctccaccatccccggcgtcaaggaagacgtcatccagatcatcctgaacctcaaggaa
ctcgtcgtgaaattccacgcgagcggccccaagaccctgaccctgcgtgcgcagggcgaa
ggcgtcgtgaaggccagcgcctttgaggtccccagtgacgccgagatcgtcaaccctgac
ctcgtgatcgccaacctcgccgaggacggcaaactggtcatggaagtgcgcgttgaggaa
ggcgaaggctacgtccctgcggacaagcacgccaccaaagaccgcatcaactcgatcccg
gtggacgccgtgttctccccggtgcgccgcgtggcgtaccacgtggaaaacacccgagtc
ggtcagcagaccgacctggaccgcctgatcctgcgcgtctggaccgacggcagcaccagc
ccccaggacgccctggacaaggctgtggaaatcctgcgcgatgaactcacggtgttcggc
aacgtggaaaccctccccgccgccgcgcccgagtatcagcagcccgtctacacgcctgcg
cccaccgcgccgaacgtgtacgacctgccgcccagcgctgccagcctgaacctgaacccc
ggcgactaccccgccgagatggattccccccgcgtgaccctcgaagggctgggcctcacc
acccgcgtgctgcactccctgaaggaagaaggcatcgacagcgtggacgccctgtgcgcg
ctgtccgaccgggacctcaaaaaggtccccggcattggtgagcgcagcctcgacgagatc
aaacagcagctggcccagttcggcctggcgctgcgcgactga
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