Deinococcus taeanensis: LAJ19_04725
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Entry
LAJ19_04725 CDS
T09106
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dtae
Deinococcus taeanensis
Pathway
dtae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dtae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LAJ19_04725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dtae03400
]
LAJ19_04725
Enzymes [BR:
dtae01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LAJ19_04725
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LAJ19_04725
DNA repair and recombination proteins [BR:
dtae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LAJ19_04725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
zinc-ribbons_6
Zn-ribbon_8
DZR
Motif
Other DBs
NCBI-ProteinID:
UBV43522
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All DBs
Position
972605..973444
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AA seq
279 aa
AA seq
DB search
MPELPEVETTRKKIEPLLLGRTILEVSHDAPHRYRDTHLAAGRRVTALSRRGKYLMLHLA
AADAAQDAPHDLEFIVHLGMTGGFRMERGKHTRVTLRTDAGELHFDDPRRFGKMAVVPAG
KYAGMPTLTAMGPEPLSDAFREEDFVALAARAGAVKPWLLSQKPVSGVGNIYADESLWQA
RIHPAQTRLTRGEAGRLYHAVRDVMGRAVDAGGSSLGSGEGNYRQHDGLSGLFQHSHVVY
GRSGEPCPRCGTPIEKMVLAQRGTHFCPQCQPLRREERA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgccggaagtggaaaccacaaggaagaagattgagccgttgctactgggc
cgcacgattctggaggtcagtcacgacgcgccgcaccggtaccgggacacgcacctggcg
gccgggcggcgcgtgacggccctgtcgcggcgcggcaagtacctgatgctgcacctggcg
gcggcagacgccgcgcaggacgcgccgcacgacctggagttcatcgtgcatctgggcatg
accggggggttccgcatggagcgcggcaagcacacccgggtgacgctccgcaccgatgcg
ggcgaactgcacttcgacgatccacgccggttcgggaagatggcggtggtgccggccggt
aagtacgcgggcatgccgaccctgactgcgatgggacctgagccgctgtcagacgcgttt
cgggaggaggatttcgtggcgcttgccgcgcgggccggcgcggtgaaaccctggttgctg
tcgcagaagcccgtgagtggggtggggaacatctacgcggacgagagcctgtggcaggcg
cgcattcacccggcgcagacccgcctgacgcggggggaggccggccggctgtaccacgcg
gtgcgggacgtgatgggccgcgccgtggacgccgggggcagcagcctggggtccggggag
ggcaactaccggcagcatgacggactgtcggggctgtttcagcattcgcatgtggtgtac
ggccggagtggggagccctgcccgcgctgcggcacgcccattgagaagatggtgctcgcg
cagcgcggcacgcatttctgcccgcagtgccagccgctgcggcgggaggagcgcgcgtga
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