Deinococcus taeanensis: LAJ19_06055
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Entry
LAJ19_06055 CDS
T09106
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dtae
Deinococcus taeanensis
Pathway
dtae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dtae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LAJ19_06055 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dtae03019
]
LAJ19_06055 (recQ)
03400 DNA repair and recombination proteins [BR:
dtae03400
]
LAJ19_06055 (recQ)
Enzymes [BR:
dtae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LAJ19_06055 (recQ)
Messenger RNA biogenesis [BR:
dtae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LAJ19_06055 (recQ)
DNA repair and recombination proteins [BR:
dtae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LAJ19_06055 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
RQC
DEAD
RecQ_Zn_bind
Helicase_C
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UBV43775
LinkDB
All DBs
Position
1246671..1248836
Genome browser
AA seq
721 aa
AA seq
DB search
MSAAVPTPNAALTLLKTVWGYDAFRGVQADIVHTVTQGGNAMVLMPTGGGKSLCYQVPSL
LRDGVGIVVSPLIALMKDQVDTLRGLGVRAAALNSTLSPEGVREVEAALLAGTLDLLYVA
PERLLLPRTLELLERAPVALFAVDEAHCVSQWGHDFRPEYQGLGVLPERFPQVPRLALTA
TADDRTRADILNVLGLRGAPQFISSFDRPNIQYRVATKEGPKTQLLDFIRSEHPGDAGIV
YCLSRKSVEDTARWLQAQGVDAVAYHAGLPPRERTLAQDRFLNEEGLVVVATVAFGMGID
KPNVRFVAHLDLPKSMEGYYQETGRAGRDGLPSTAWMVYGLADVVNVRRMLASSDAPEEV
KRVEAAKLDALLTYCETASCRREVLLEYFGEAYQGPCGHCDTCINPPQVRDMTREAQMAL
SAAIRTGNRYGAAHLTDVLLGRATEKVVAMNHHTLPTFGVGATHDEKTWRGVLRQLVSLG
YLAAAEHHGLSATGKARALLKGETTLALREDTLSARPGKRDRGDRTRDRASRAPVSADDQ
PLFETLRQWRLTRARAQGVPPYVIFTDATLKAITEFKPTSHATLGTVSGIGQRKLSDYGD
EVVQIVRDALSGKTVTLPDPQERGVRANSAVLGVLNRRGPDALDETPAPASVADALRDLR
RTLTRETGLSAYVIYTNAALEALAERQPRSLDDLRDIPGFGPKRIEAYGERILAAVDRVL
A
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgctgtgcccacccccaacgctgccctgaccctcctgaagaccgtatggggc
tacgacgccttccgcggcgtgcaggctgacatcgtccacaccgtcacgcagggcggcaac
gccatggtcctgatgcctaccggcggcggcaagagcctgtgctaccaggtgcccagcctc
ctgcgcgacggtgtgggcatcgtggtgtcccccctgattgccctgatgaaggaccaggtg
gataccctgcgcggtctgggtgtccgggccgccgccctgaactccacgctgtccccggag
ggcgtccgcgaggttgaagcggccctgctggccggcactctggacctgctgtacgtcgcc
cccgagcgcctgctgctgccgcgcaccctggagctcctggagcgggccccggtggccctg
ttcgctgtggacgaagcccactgcgtgtcccagtggggccatgacttccggccggagtac
cagggcctgggggtgctgcccgaacgctttcctcaggtgccgcgcctcgccctgactgcc
accgcggacgaccggacccgcgcggacatcctgaacgtgctgggtctgcgcggcgcgccg
cagttcatctcatctttcgaccggccgaacatccagtaccgggtggcgaccaaggaaggc
ccgaaaacgcagctgcttgacttcatccggagcgaacacccgggggacgcgggcatcgtg
tactgtctgtcgcgaaaatccgtggaggacaccgcgcggtggcttcaggcgcagggtgtc
gatgcggtcgcgtaccacgctggcctgccaccccgtgaacgcaccctcgctcaggaccgc
ttcctgaatgaggagggtctggtggtggtcgccaccgtggccttcggcatggggatcgac
aaaccgaacgtgcggttcgtggcgcacctggacctgcccaagagcatggaaggctactac
caggaaacgggccgcgctggccgtgacggtctgcccagcaccgcctggatggtgtacggc
ctcgccgacgtcgtgaacgtgcgccgcatgctggcctccagcgacgcccccgaggaggtc
aagcgggtggaggccgcgaagctcgacgccctgctcacctactgcgagacggcctcctgc
cgccgcgaggtgctgctggagtacttcggcgaggcctaccagggcccgtgcggccactgc
gacacctgcatcaaccctccgcaggtgcgggacatgacccgcgaggcccagatggcgctg
tcagccgcaatccggaccgggaaccgttacggcgccgcgcacctgaccgacgtcctgctg
ggccgcgccaccgagaaggtcgttgccatgaatcaccacacgctgccgaccttcggggtg
ggcgccacacacgacgagaaaacctggcggggcgtgctgcgccagctcgtgagcctcggg
taccttgcggccgccgagcaccacggcctgtccgccaccggcaaggcccgcgcgttactg
aagggcgaaacgaccctggcgctgcgcgaggataccctgagcgcccggcccggcaaacgg
gaccgcggcgaccgcacccgggaccgcgccagccgcgcgcccgtctcggctgatgatcag
ccgctgttcgagacgctgcggcagtggcgcctgacccgcgcgcgcgcgcagggcgttccg
ccgtacgtgatcttcacggacgctaccctgaaagccatcacggaattcaagcccaccagc
cacgccaccctgggcaccgtcagcggcatcggacagcgcaaactcagtgattacggcgat
gaggtcgtgcagatcgtccgggacgccctgagcggcaagacggtcacgctgcccgacccg
caggagcggggcgtgcgggcaaactccgccgtgctgggcgtcctcaatcgccgcggcccg
gacgccctggacgaaacccccgcgccagcgtccgtcgcggacgccctgagggacctgcgg
cgcaccctcacccgcgaaactggacttagtgcgtacgtgatctatacgaacgccgcgctt
gaagcgctcgctgaacgccagccccgcagcctcgacgatctgcgggacatccccggcttc
ggacccaaacgaattgaagcgtacggtgaacggattctggccgccgtggaccgcgttctc
gcctga
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