Deinococcus taeanensis: LAJ19_09910
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Entry
LAJ19_09910 CDS
T09106
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dtae
Deinococcus taeanensis
Brite
KEGG Orthology (KO) [BR:
dtae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dtae03032
]
LAJ19_09910 (topA)
03400 DNA repair and recombination proteins [BR:
dtae03400
]
LAJ19_09910 (topA)
Enzymes [BR:
dtae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LAJ19_09910 (topA)
DNA replication proteins [BR:
dtae03032
]
Prokaryotic type
DNA Topoisomerases
LAJ19_09910 (topA)
DNA repair and recombination proteins [BR:
dtae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LAJ19_09910 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UBV41953
LinkDB
All DBs
Position
2061223..2064129
Genome browser
AA seq
968 aa
AA seq
DB search
MPRTPAHTLVIVESPAKARTIEKYLGKGYTVESSIGHIRDLPKSASDIPERFKGKAWARL
GLDIENDFQPLYVVSPEKRQHVAKLRKMASEADEIILATDDDREGESIAWHLFQELKPKV
PVRRMVFHEITKEAIQAAIAAPRQIDTNLVEAQEARRALDRLYGYEVSPVLWKKVAPKLS
AGRVQSVATRMLVERERERMQFVSGSWWDLLVSAQTAAAQSFPARLTELNGQKLAAGRDF
DPLTGQLKAGADVRVLTEPEAQALGQALAGQALTVASAEEKPFTQRPYPPFITSTLQQEG
SRKLGFAATRTMRAAQKLYEQGYITYMRTDSTNLSTEAVTAARTQVTQMYGPSYLSPQPR
VYAKKAKNAQEAHEAIRPAGSSFRTPDSLRGELGGDEWRLYDLIWKRTVACQMADARGRS
LRVRLTGRAASGEEVGLNASGRTIDFPGFLRAYVEGSDDPSAALEDRETPLPPLREGERV
TADSVKPEGHETQPPARYTEASLVQALEAAGIGRPSTYASILGTIQDRGYATKKGQALVP
SWTAFATSALLEHHFASLVDYDFTAKMEEDLDDIAGGRAQRVPYLRRFYLGDHGEGMALR
PLIDSKMGEIDARGIATIRVPKLQDSGIEVRVGRYGPYMERGEQKANLPEDLAPDELTAE
KAEELLARPTGDRPLGTDPDSGHPVVARAGRYGPYVTLGDTNPPVRSASLFPSDDLNALT
LERALKLLSLPRLVGVSGEEEVWAFNGKYGPYLKRGSDSRSLSTHEDLFAVGMQEAEALF
NQPRFGRGRGAAAAPLRTFEFEGRAPIFLKSGRFGPYLTDGERNATLRKGEEEATLSAER
ALEILEERGKEPQKKAGKTPRKAAPTRQPAAKKAPSKKAAVKAPAGRSGKGPAKVTPAKA
APKASFTWTDLKPHLGVLSAQEQQLVTATREGGRKVEDVAPELGLDVKKAKGMALQASKK
LNQAARGE
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgcccagaacacctgcccacacgctagttatcgtcgagtcgcctgccaaggcccgcacc
atcgagaagtacctcgggaaggggtacacggtggagtcgtccatcgggcacatccgcgac
ctgccgaaaagcgcgtcggatattcccgagcggttcaagggcaaggcctgggcgcggctg
ggcctggacattgagaatgacttccagccgctgtacgtggtctcccccgaaaagcgccag
cacgtcgcaaaactgcgcaagatggcgtccgaggcagacgagatcatcctcgccaccgac
gatgaccgggaaggcgaaagcatcgcgtggcacctgtttcaggagctgaagccgaaagtg
ccggtgcggcgcatggtgttccacgagatcaccaaagaagccattcaggccgcgatcgcc
gcgccgcggcagatcgacacgaacctcgtcgaggcccaggaagcgcgccgcgctctggac
cgcctgtacgggtacgaggtcagcccggtgctgtggaagaaagtggcgcccaaactctcg
gcgggccgcgtgcagagcgtcgcgacgcgcatgctggtcgagcgggagcgggagcgcatg
cagttcgtgagcggctcgtggtgggacctgctggtcagcgcgcagaccgcagccgcccag
agcttcccggcacgcctgaccgaactgaacggccagaaactggccgccggacgggacttc
gatccgcttaccgggcagctcaaggccggcgcggacgtccgggtcctgaccgagcccgaa
gcgcaggcgctgggccaggccctggctggacaggccctgaccgtcgcgagcgcagaggaa
aaaccgttcacccaacggccgtacccgccgttcatcacgtccacgctgcagcaggaaggc
agccgcaagctgggcttcgcggccacccgcacgatgcgcgccgcgcagaaactgtatgag
caggggtacatcacctacatgcgtacggacagcaccaacctgagcacggaggccgtgacg
gccgcccgcacccaggtcacgcagatgtacggccccagctacctctcgccgcaaccccgc
gtctacgccaagaaagcgaagaacgcccaggaagcgcacgaggcgatccgcccggccggc
agcagtttccgcacgcccgacagcctgcgcggcgaactgggcggcgacgagtggcgcctg
tacgacctgatctggaagcgcacggtcgcctgccagatggccgacgcgcgcggccgcagc
ctgcgcgtccgcctgaccggacgcgcggccagcggggaggaggtcggcctgaacgcctcg
ggccgcaccattgacttccccggcttcctgcgggcctacgtggaaggcagcgatgacccc
agtgccgcgctggaagaccgcgaaacgccgctgccgcccctgcgcgaaggcgagcgggtc
acggccgacagcgtgaagccggaagggcatgagacgcagcctcccgcgcgctacacggag
gcgtccctggtgcaggcactggaagcggccggaatcgggcggcccagtacgtacgccagc
atcctcggcaccatccaggaccgcgggtacgccacgaaaaaagggcaggcgctcgttccg
tcctggacggcgttcgccacctccgccctgctggaacaccacttcgcctcgctggtggat
tacgacttcaccgccaaaatggaagaggacctggacgatatcgccggcggccgcgcgcag
cgcgtcccgtacctgcgccgcttctacctcggcgaccatggggagggcatggccctgcgg
cccctgatcgactcgaagatgggcgagatcgatgcgcgcggcatcgccacgatccgcgtg
ccgaaactccaggactccggcatcgaggtgcgcgtgggccgctacggtccctacatggaa
cgcggcgagcagaaagcgaacctccccgaagacctcgcgccggatgaactgacggccgag
aaggccgaggaactgctcgcccgcccgaccggggaccgccccctgggcaccgacccggac
agtgggcacccggtcgtggcgcgcgccggccggtacgggccgtacgtgacgctcggggac
accaaccctccggtccggtcggccagcctgttccccagcgacgacctgaacgccctgacc
ctggaacgcgccctgaagctcctgagtctcccgcgcctcgtgggggtcagcggggaggag
gaggtctgggccttcaacgggaagtacggcccgtacctcaagcgcggcagtgacagccgc
tccctgagcacccacgaggacctgtttgccgttgggatgcaggaggccgaggcgctgttc
aaccagccgcgcttcggccggggccgcggggccgcggcggcgcccctgcgcacctttgaa
ttcgaagggcgcgcgcccattttcctgaagtccggccggttcgggccctacctgaccgac
ggggaacgcaacgccacgctccgcaaaggtgaggaggaagccaccctcagtgctgaacgg
gccctggagatcctggaggagcgcggcaaggaaccccagaagaaagccggcaagaccccc
cgcaaggcggcccccaccagacaacccgccgcgaagaaggcacccagtaaaaaggcggcc
gtgaaagcgccggcgggccggtccggcaaaggaccggcaaaggtcaccccggccaaggcg
gcccccaaggcgagcttcacctggaccgacctcaaaccgcacctgggcgtcctgagtgcg
caggaacagcaactggtcactgccacccgggagggcggccgcaaggtggaagacgtcgcg
ccggaactcggcctggacgtgaagaaagccaagggaatggcgctgcaggccagcaagaaa
ctcaaccaggccgcgcgcggggagtaa
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