Deinococcus taeanensis: LAJ19_11605
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Entry
LAJ19_11605 CDS
T09106
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dtae
Deinococcus taeanensis
Pathway
dtae03030
DNA replication
dtae03430
Mismatch repair
dtae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dtae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LAJ19_11605 (dnaE)
03430 Mismatch repair
LAJ19_11605 (dnaE)
03440 Homologous recombination
LAJ19_11605 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dtae03032
]
LAJ19_11605 (dnaE)
03400 DNA repair and recombination proteins [BR:
dtae03400
]
LAJ19_11605 (dnaE)
Enzymes [BR:
dtae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LAJ19_11605 (dnaE)
DNA replication proteins [BR:
dtae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LAJ19_11605 (dnaE)
DNA repair and recombination proteins [BR:
dtae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LAJ19_11605 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
Motif
Other DBs
NCBI-ProteinID:
UBV42262
LinkDB
All DBs
Position
complement(2408744..2412736)
Genome browser
AA seq
1330 aa
AA seq
DB search
MTAPADAEKPHIHLPDGSCCTPKRFAHLHQHTQYSLLDGAAKLKDLLKWAKEVTPDGCAP
ALAMTDHGNMHGAVHFYNYAQAAGVKPILGYEAYVVPGAGTRRDRTRGQDGEKGIFHLTL
LARDFEGYQNLCRLSSRGYTEGYYYKPRIDHELLQEHHKGVIAFSGCLGSEVQQLLLQGR
EDDAKKRLLWYRELFGENYFIEIQDHGLSEQKKNNPILKAWAQELGIGMVATNDGHYVKK
SDATAHETLLAIQTKATLADENRFKFPCDEFYVKNLEEMQAALPVSEWGEEPFDNTAMIA
DLCNVDLPVGKKRVYQMPALPIPEGRTMAEELRVQTYRGTVKRYPAHATEALLRDYAARS
LEALGADATAVLARTGGCDPRSCDLETLFTLLAFAGSVWEKRGKDGGEKYTKYPALELME
AQAETGPLPAYAHEDCRRAAQKASDTRIALDGAADEETTRAHHRHALVILRRAEYELSVI
NNMGFPDYFLIVADYINWAKDQDISVGPGRGSGAGSLVAYAMRITNLDPLEFELLFERFL
NPDRISMPDFDIDFNDARRTEVIQYVQDKYGEDKVAQIATFGTMASKACLKDVARVMGLE
YAKVDKVSKLIPIKFGKSYSLEQAREAVPDIQQLLAEDQQLLEAYEFAQKLEGLTRHASV
HAAGVVIGKTQLTDLVPVMRDTSGAGMVCQYDMKAVEDIGLIKMDFLGLRTLSFLDEAKR
ILRESGTDFEQRYGTFDDIPFDDARTYELLSRGDTKGVFQLEGAGIADASRRLKPRRLAD
IIALSALYRPGPMENIPTYVRRHHGVEDVDYVKDGFPNSARWLEKILKETYGIPVYQEQI
MQIASEVAGFSLGGADLLRRAMGKKDAEEMKRQRQIFVEGAEHNGVPRDEGNKLFDLLDA
FANYGFNKSHSAAYGVITYQTAWLKANYPVQFMAALLTVERKDSDKVAEYVSDARKMDVR
VLPPDINRSNADFAVVGQEILFGLYAIKGLGEGAVLKILEERERAGRFRSLADFCSRLGH
KVCNRKALESLIKSGAFDQFGDRRQLLESLEEAMTWAQGAAALANSGMDALFGAQEVAPE
PKLRAGVTPFTDLERLAIEKEALGLYISGHPLEQHEGLREAASCRIADLDTWFQTQNVAP
GKRMKAVLAGMIESVVKKPTKSGGMMARFILADESGQTELVAFSRAYDRIQDKLVNDTPA
LVIVELESEDGGLRAIAEEVVSVEQLAEVPKVMYVTIDLENATPDAVGEFQSVLDEHAGS
MPTYLRLETPEQFVLYQLDHGMGSPEAIRVLNQTFPWADAYLAYDQQTILGRFAPKPPAW
MNKQGAGMRA
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgcctgccgatgccgagaaaccgcatattcacctcccggacggctcctgctgc
accccgaaacgcttcgcacacctgcaccagcacacgcagtactccctgctggacggcgcg
gcgaagctcaaggacctgctgaagtgggccaaggaggtcacgccggacggctgcgcgccc
gccctggccatgaccgatcacggcaacatgcacggcgcggtgcacttctacaactacgcc
caggcggccggggtcaagccgatcctcgggtacgaggcctacgtggtgccgggggccggc
acgcgccgggaccgcacgcgcggccaggacggcgagaagggcatctttcacctcacgctg
ctcgcccgcgacttcgagggctaccagaacctgtgccgcctgagcagccgcggctacacc
gaaggctactactacaagccccgcatcgaccatgaactgctgcaggagcaccacaagggc
gtgattgccttctccggctgcctgggcagcgaggtgcagcagctgctcctgcagggccgc
gaggacgacgccaaaaaacgcctcctgtggtaccgcgagctgttcggcgaaaactacttc
attgagattcaggaccacgggctgagcgagcagaagaagaacaacccgatcctgaaagcc
tgggcgcaggaactcggcatcggcatggtcgccacgaacgacggccactacgtcaagaaa
agcgacgccaccgcgcacgagaccctgctggccatccagacgaaagccaccctggccgac
gagaaccgcttcaagttcccctgcgacgagttctacgtcaagaacctcgaggagatgcag
gcggcgctgcccgtgagcgagtggggtgaggaacccttcgacaacaccgccatgatcgcc
gacctgtgcaacgtggacctcccggtcggaaagaaacgcgtgtaccagatgccggccctg
cccatccccgagggccgcaccatggccgaggaactgcgcgtgcagacctaccgcggcacc
gtgaaacgctacccggcccacgccaccgaagcgctgctgcgcgactacgccgcgcgcagc
ctcgaagcgctcggcgcagacgccactgccgtgctggcccgcacgggcggctgcgacccg
cgcagctgcgacctggagacgctgttcacgctgctggcctttgccgggagcgtctgggag
aaacgcggcaaggacggcggggagaagtacacgaagtaccccgcgctggaactcatggaa
gcccaggccgagaccggaccgctgcccgcgtatgcccacgaggactgccgccgcgccgcg
cagaaagccagcgacacccgcatcgccctggacggcgcggcggatgaggagaccacccgc
gcccaccaccgccacgcgctggtgatcctgcgccgcgccgagtacgaactgagcgtcatc
aacaacatggggttccccgactacttcctgatcgtcgcggactacatcaactgggccaag
gaccaggacatcagcgtgggcccgggacgcggctcgggcgccgggtcacttgtggcgtac
gccatgcgcatcacgaacctggacccgctggagttcgagctgctgttcgaacgcttcctg
aacccggaccgcatctccatgcccgacttcgacattgacttcaacgacgcccggcgcacc
gaggttatccagtacgtgcaggacaagtacggcgaggacaaggtcgcgcagatcgccacc
ttcgggaccatggcgagcaaggcctgcctgaaggacgtggcgcgcgtcatggggctcgaa
tacgccaaggtcgacaaggtcagcaaactcatcccgatcaagttcggcaaaagctactca
ctggagcaggcgcgcgaggccgtgccggacatccagcagctgctcgccgaggaccagcag
ctgctcgaggcgtacgagttcgcgcagaaactcgagggcctgacccggcacgccagcgtg
cacgccgcgggcgtcgtgatcggcaagacgcagctcaccgacctcgtacccgtcatgcgc
gatacgtccggcgcaggcatggtctgccagtacgacatgaaggccgtggaagacatcggc
ctgatcaagatggacttcctgggcctgcgcaccctgtccttcctggacgaagccaaacgc
atcctgcgggaatccggcaccgacttcgaacagcgctacggcaccttcgacgacattccc
ttcgatgacgcccgcacctacgagctgctgagccgcggcgacaccaagggcgtgttccag
ctcgaaggcgccggcattgccgatgccagccgccgcctcaaaccacgccgcctcgcggac
atcatcgcgctgagcgccctgtaccgcccgggcccgatggagaacatccccacgtacgtc
cgccgtcaccacggcgtggaggacgtcgattacgtcaaggacggctttccgaacagcgcc
cggtggctggagaagatcctgaaggaaacctacggcatccccgtgtaccaggagcagatc
atgcagattgcctccgaggtcgccgggttctccctgggcggcgcggacctgctgcgccgc
gcaatgggcaaaaaggacgccgaggaaatgaaacgccagcggcagattttcgtggagggc
gccgagcacaacggcgtgccccgcgacgagggcaacaagctcttcgatctgctggacgcc
ttcgcaaactacggcttcaacaagagtcactccgccgcgtacggcgtgatcacgtaccag
accgcgtggctcaaggcgaactaccccgtgcagttcatggccgcgctcctcaccgtggaa
cgcaaggacagtgacaaggtcgccgagtacgtcagtgacgctcgcaagatggacgtccgg
gtcctgccgccggacatcaaccgctcgaacgccgacttcgcggtggtcgggcaggagatt
ctgttcggcctgtacgccatcaagggcctcggggaaggcgccgtgctgaaaattctggag
gagcgtgaacgcgccgggcgcttccggtccctcgcggacttctgctcccgcctgggccac
aaggtctgcaaccgcaaggccctggaaagcctcatcaagtccggcgccttcgaccagttc
ggcgaccgccgccagctgctcgagagcctggaggaagccatgacctgggcgcagggcgcc
gcggccctcgccaacagcggcatggacgccctgttcggcgcgcaggaggtggcgcccgaa
ccgaaactccgggcgggcgtcacgccgttcacggacctggaacgtctcgccatcgagaaa
gaagccctggggctgtacatcagcggccaccctctggagcagcacgagggcctgcgcgag
gctgccagctgccgcatcgcggacctggacacctggttccagacacagaacgtcgcgccc
ggcaaacgcatgaaggccgtgctggccggcatgatcgaaagtgtcgtcaagaaacccacc
aaaagtggcggcatgatggcccgcttcattctcgccgacgagtccggccagacggaactc
gtggcgttcagccgcgcctacgaccgcattcaggacaaactcgtgaacgacacgcccgcc
ctggtcatcgtggaactggaatccgaggacggcggcctgcgcgccatcgccgaggaggtc
gtcagcgtcgagcagctcgccgaggtgcccaaggtcatgtacgtgaccatcgacctggag
aacgccacacccgacgccgtgggtgaattccagagtgtgctcgacgagcatgccggcagc
atgcccacctacctgcgcctggaaaccccggagcagttcgtgctgtaccagctcgatcac
ggcatgggcagccccgaggcgatccgcgtgctgaaccagaccttcccctgggcagacgcg
tacctcgcgtacgaccagcagaccatcctgggccgcttcgctccgaaaccccccgcgtgg
atgaacaagcagggcgccggcatgcgcgcctga
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