Deinococcus taeanensis: LAJ19_12280
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Entry
LAJ19_12280 CDS
T09106
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dtae
Deinococcus taeanensis
Brite
KEGG Orthology (KO) [BR:
dtae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dtae03032
]
LAJ19_12280
03400 DNA repair and recombination proteins [BR:
dtae03400
]
LAJ19_12280
Enzymes [BR:
dtae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LAJ19_12280
DNA replication proteins [BR:
dtae03032
]
Prokaryotic type
DNA Topoisomerases
LAJ19_12280
DNA repair and recombination proteins [BR:
dtae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LAJ19_12280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UBV42391
LinkDB
All DBs
Position
complement(2555206..2556243)
Genome browser
AA seq
345 aa
AA seq
DB search
MPGRTDLLQEEYLRREGHDPKAFQYFWPDDTPYTDETGLARIARLAVPPAYEAVFVSPDD
TAELQAFGRDAAGRLQYRYHPDFVQAGALKKWQRLTRFAGMLGPLKTTTAADLRAQGLPP
RKVTALMTRLLHVARFRVGSDIYARQHKTYGLSTLRQRHVQVSGNTVTFHFKGKHSITQH
KATTDRTLAANITRLLELPGPWLFQTADADGARRRIRSGELNAYLREVIGPFTAKDFRTW
GGTLLAAEYLAECGVASTDRQARQVLVDCVKYVAADLGNTPAVTRSSYICPVIFDRYLEG
KVLDDYEPRAARTDSDLGGLTRSEAALKRMLESEKTLKVPRRKIQ
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcccggccgcaccgacctcctgcaggaggagtacctgcgccgcgaaggccatgacccc
aaagccttccagtacttctggccggacgacaccccgtacaccgacgagaccggcctggcc
cgcattgccagactggccgtgccgcccgcctacgaggcggtgttcgtctccccggacgac
accgcggaactgcaggctttcggccgggacgccgccgggcgcctgcagtaccgttaccac
ccggacttcgtgcaggccggcgcactgaaaaaatggcagcggctcacccgcttcgccggt
atgctcggccccctgaaaaccaccaccgctgccgacctgcgcgcccagggtctgccgcca
cgcaaggtcacggccctcatgacccgcctgctgcacgttgcgcgcttccgcgtgggcagc
gacatctacgcccggcagcacaagacgtacggcctgagcaccctgcgccagcggcacgtg
caggtcagcggcaacaccgtcacctttcacttcaagggcaagcacagcatcacgcagcac
aaggccaccaccgaccgcaccctcgccgcgaacatcacgcgcctgcttgaactaccgggc
ccgtggctgttccagaccgcggacgccgatggtgcgcgccggcgcatccggtccggtgag
ctgaacgcgtacctgcgagaagtgatcggtccgttcaccgccaaggacttccgcacgtgg
ggcggaacgcttctggccgccgagtacctcgcggagtgcggcgtggccagcaccgaccgg
caggcgcggcaggttctcgtggactgcgtgaagtacgtggccgcagacctgggcaacacg
cccgccgtgacgcgcagcagttacatctgccccgtcatcttcgaccggtacctggagggc
aaggtgctcgacgactacgagccccgcgccgcgcggaccgacagtgacctgggcggcctg
acccgcagcgaggccgcgctgaagcgcatgctggaaagcgagaagaccctgaaggtgccc
cgcagaaagattcagtag
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