Deinococcus taeanensis: LAJ19_12445
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Entry
LAJ19_12445 CDS
T09106
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
dtae
Deinococcus taeanensis
Brite
KEGG Orthology (KO) [BR:
dtae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dtae03016
]
LAJ19_12445 (thpR)
Enzymes [BR:
dtae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
LAJ19_12445 (thpR)
Transfer RNA biogenesis [BR:
dtae03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
LAJ19_12445 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
UBV42423
LinkDB
All DBs
Position
2592164..2592835
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AA seq
223 aa
AA seq
DB search
MNVKLKVTPAVRRAPKDRPSPPARGGAGTHTPATQRLFFALKVPATITPPMVAAQKKLRG
NWRAVQPEQLHVTLAYLPAVPHDRVEDLKRLGNRLSADHPPLNLNLRGTGYFPNEGSPRV
WFVKVEGEGLNELAAALREGIQALGLSTDDLPFKAHVTLARKKGPAPRVPPLLFTDHWQS
GGVTLYRSILRKTGPIHETVSTFRLRGTPVLTPLPAEASQETP
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcaagctcaaagtcacgcccgcggtgcgccgcgctccgaaggaccggcccagc
ccacccgcccggggaggggccggcacccacacgccggccacgcagcgcctcttcttcgcg
ctgaaggtccccgcgaccatcacgccgcccatggtggccgcccagaagaaactgcgcggc
aactggcgcgcggtgcagcctgaacagctgcacgtgacgctggcgtacctgccggccgtt
ccgcacgaccgcgtcgaggacctcaagcgcctgggcaaccgcctgagcgccgaccatccg
ccgctgaacctgaacctgcgcggcaccgggtacttcccgaatgaaggcagcccccgcgtg
tggttcgtgaaggtcgagggcgaaggcctgaacgagctggcggccgcgctgcgcgagggc
attcaggcgctgggcctgagcaccgacgacctgcccttcaaggcgcacgtcacgctggcc
cgcaagaagggcccggcgccgcgcgttcctccgcttctctttaccgaccactggcagtcc
ggcggcgtcacgctgtaccgcagcatcctgcgcaagaccggacccattcacgaaaccgtc
agtaccttccgcctgcgcggaacacccgtcctcaccccgctccccgccgaagcttcccag
gagacgccatga
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