KEGG   Deinococcus taeanensis: LAJ19_13085
Entry
LAJ19_13085       CDS       T09106                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
dtae  Deinococcus taeanensis
Pathway
dtae03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dtae00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LAJ19_13085 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dtae03019]
    LAJ19_13085 (rny)
Messenger RNA biogenesis [BR:dtae03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LAJ19_13085 (rny)
SSDB
Motif
Pfam: HD RNase_Y_N KH_1 HDOD KH_KhpA-B KH_PNO1_2nd KH_2 KH_NusA_2nd LapA_dom
Other DBs
NCBI-ProteinID: UBV42544
LinkDB
Position
complement(2716408..2718105)
AA seq 565 aa
MTIIWIIVALLLGLVGGFLAGQSRGAQQRAEVDDRLQQEARTEADRIRAQAEADARTLRA
EADQARQDASRRTQDAAEREAQLHVHLAQLDGQREQIATLRAQLDAERAQTKQDAQRERE
ALASDRQETRRERDELKREIERLNRRAEQLDARGEKLDALEERLEDRARLMTEQEADLTA
RAHQADLKLYEIASLSPEAARAEILGRLDAELEEEKAVRVKAMQERASAEAKRSARHVIA
QAIQRSASETSAALSVSVVPIPNDAMKGRLIGREGRNIRAFEALTGVDLIIDDTPEAVIL
SSFNPVRREVARHVLDALVADGRIHPTRIEEMVHKAQEEMKVFMHAQGEEAAIEAGVVGI
KPGLVQLLGRMYFRTSYGQNVLKHSIQVAHLTGIMAGELGLDAAMARRAGLMHDVGKSID
REIDGTHVEIGINLARRFGEPVEVIDAIAHHHDPENGETLYSVLVAAADAISAARPGARR
EELESYVRRLEQLEQIAVSFPGVQQAYAIQAGREVRVIVQPDKVTDAQATLLAREIAGRV
EQDMEYPGQVQVTVVRESRAVEVAR
NT seq 1698 nt   +upstreamnt  +downstreamnt
atgacgatcatctggatcattgtggcgctgctgctcgggttggtcggggggttcctggcg
gggcagtcacgcggcgcgcagcagcgggccgaggtcgatgaccggctccagcaggaggcc
cgcactgaagcggaccgcatccgcgcgcaggcagaagccgacgcgcgcaccctgcgggca
gaggccgaccaggccaggcaggacgccagccgaagaacccaggacgccgccgaacgcgaa
gcgcagcttcacgttcacctcgcccagcttgacggccagcgtgagcagatcgccacgctc
cgtgcccagctcgatgccgagcgcgcccagaccaagcaggacgcgcagcgcgaacgcgaa
gccctcgcctccgaccggcaggaaaccaggcgggagagagacgaactcaaacgcgaaatc
gaacgcctcaaccggcgcgccgagcagctcgacgcccggggcgagaaactcgacgccctg
gaagaacgccttgaggaccgcgcccgcctgatgaccgagcaggaagccgacctcacggcc
cgcgcccaccaggcggacctcaaactctacgaaatcgccagcctgtccccagaagcggcg
cgtgctgaaattctcggccggctggacgccgagcttgaagaagagaaggcggtgcgcgta
aaagcgatgcaggaacgcgcctctgccgaagccaaacgctccgcgcggcacgtgattgcc
caggccattcagcgcagcgcctccgaaaccagcgccgccctgagcgtctcagtggtgccc
attcccaacgacgccatgaaaggccggctgatcggccgcgagggccgcaacatccgcgcc
ttcgaagcgcttaccggcgtggacctgatcatcgacgacacccctgaagccgtgattctc
tcctcgttcaaccccgtgcggcgcgaggtggcccggcacgtgctggacgccctggtggcc
gacggccgcatccaccccacccgcattgaggagatggtgcacaaggcgcaggaggagatg
aaggtcttcatgcacgcccagggggaggaagccgccatcgaggccggcgtggtcggcatc
aaaccgggcctggtgcagttgctgggccgcatgtacttccgtaccagctacggtcagaac
gtcctgaagcactccattcaggtggcgcacctgaccggcatcatggccggcgaactgggc
ctggacgccgccatggcccgccgcgccggtttgatgcacgacgtgggcaagagcatcgac
cgcgaaattgatggcacacacgtggaaatcggaatcaacctcgcccggcgtttcggagag
ccggtcgaagtgattgacgcgatcgcccatcaccacgaccctgaaaacggcgagacgctg
tactccgtgctggtcgcggcggcagacgccatcagtgccgcgcggcccggggcgcggcgc
gaggagctggaatcctacgtgcgccggctggaacagctggaacagattgccgtgtccttc
cctggcgtgcagcaggcgtacgccattcaggctgggcgggaggtgcgcgtgattgtgcag
ccggacaaggtcacagacgcccaggccacgctgctggcacgtgaaattgccggacgcgtg
gagcaggacatggaataccccgggcaggtgcaggtgaccgtggtccgtgagagccgcgct
gtggaagtcgcccggtaa

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