Deinococcus taeanensis: LAJ19_13085
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Entry
LAJ19_13085 CDS
T09106
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
dtae
Deinococcus taeanensis
Pathway
dtae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dtae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LAJ19_13085 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dtae03019
]
LAJ19_13085 (rny)
Messenger RNA biogenesis [BR:
dtae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LAJ19_13085 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
HDOD
KH_KhpA-B
KH_PNO1_2nd
KH_2
KH_NusA_2nd
LapA_dom
Motif
Other DBs
NCBI-ProteinID:
UBV42544
LinkDB
All DBs
Position
complement(2716408..2718105)
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AA seq
565 aa
AA seq
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MTIIWIIVALLLGLVGGFLAGQSRGAQQRAEVDDRLQQEARTEADRIRAQAEADARTLRA
EADQARQDASRRTQDAAEREAQLHVHLAQLDGQREQIATLRAQLDAERAQTKQDAQRERE
ALASDRQETRRERDELKREIERLNRRAEQLDARGEKLDALEERLEDRARLMTEQEADLTA
RAHQADLKLYEIASLSPEAARAEILGRLDAELEEEKAVRVKAMQERASAEAKRSARHVIA
QAIQRSASETSAALSVSVVPIPNDAMKGRLIGREGRNIRAFEALTGVDLIIDDTPEAVIL
SSFNPVRREVARHVLDALVADGRIHPTRIEEMVHKAQEEMKVFMHAQGEEAAIEAGVVGI
KPGLVQLLGRMYFRTSYGQNVLKHSIQVAHLTGIMAGELGLDAAMARRAGLMHDVGKSID
REIDGTHVEIGINLARRFGEPVEVIDAIAHHHDPENGETLYSVLVAAADAISAARPGARR
EELESYVRRLEQLEQIAVSFPGVQQAYAIQAGREVRVIVQPDKVTDAQATLLAREIAGRV
EQDMEYPGQVQVTVVRESRAVEVAR
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcatctggatcattgtggcgctgctgctcgggttggtcggggggttcctggcg
gggcagtcacgcggcgcgcagcagcgggccgaggtcgatgaccggctccagcaggaggcc
cgcactgaagcggaccgcatccgcgcgcaggcagaagccgacgcgcgcaccctgcgggca
gaggccgaccaggccaggcaggacgccagccgaagaacccaggacgccgccgaacgcgaa
gcgcagcttcacgttcacctcgcccagcttgacggccagcgtgagcagatcgccacgctc
cgtgcccagctcgatgccgagcgcgcccagaccaagcaggacgcgcagcgcgaacgcgaa
gccctcgcctccgaccggcaggaaaccaggcgggagagagacgaactcaaacgcgaaatc
gaacgcctcaaccggcgcgccgagcagctcgacgcccggggcgagaaactcgacgccctg
gaagaacgccttgaggaccgcgcccgcctgatgaccgagcaggaagccgacctcacggcc
cgcgcccaccaggcggacctcaaactctacgaaatcgccagcctgtccccagaagcggcg
cgtgctgaaattctcggccggctggacgccgagcttgaagaagagaaggcggtgcgcgta
aaagcgatgcaggaacgcgcctctgccgaagccaaacgctccgcgcggcacgtgattgcc
caggccattcagcgcagcgcctccgaaaccagcgccgccctgagcgtctcagtggtgccc
attcccaacgacgccatgaaaggccggctgatcggccgcgagggccgcaacatccgcgcc
ttcgaagcgcttaccggcgtggacctgatcatcgacgacacccctgaagccgtgattctc
tcctcgttcaaccccgtgcggcgcgaggtggcccggcacgtgctggacgccctggtggcc
gacggccgcatccaccccacccgcattgaggagatggtgcacaaggcgcaggaggagatg
aaggtcttcatgcacgcccagggggaggaagccgccatcgaggccggcgtggtcggcatc
aaaccgggcctggtgcagttgctgggccgcatgtacttccgtaccagctacggtcagaac
gtcctgaagcactccattcaggtggcgcacctgaccggcatcatggccggcgaactgggc
ctggacgccgccatggcccgccgcgccggtttgatgcacgacgtgggcaagagcatcgac
cgcgaaattgatggcacacacgtggaaatcggaatcaacctcgcccggcgtttcggagag
ccggtcgaagtgattgacgcgatcgcccatcaccacgaccctgaaaacggcgagacgctg
tactccgtgctggtcgcggcggcagacgccatcagtgccgcgcggcccggggcgcggcgc
gaggagctggaatcctacgtgcgccggctggaacagctggaacagattgccgtgtccttc
cctggcgtgcagcaggcgtacgccattcaggctgggcgggaggtgcgcgtgattgtgcag
ccggacaaggtcacagacgcccaggccacgctgctggcacgtgaaattgccggacgcgtg
gagcaggacatggaataccccgggcaggtgcaggtgaccgtggtccgtgagagccgcgct
gtggaagtcgcccggtaa
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