Deinococcus taeanensis: LAJ19_15715
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Entry
LAJ19_15715 CDS
T09106
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dtae
Deinococcus taeanensis
Brite
KEGG Orthology (KO) [BR:
dtae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dtae03032
]
LAJ19_15715 (topA)
03400 DNA repair and recombination proteins [BR:
dtae03400
]
LAJ19_15715 (topA)
Enzymes [BR:
dtae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LAJ19_15715 (topA)
DNA replication proteins [BR:
dtae03032
]
Prokaryotic type
DNA Topoisomerases
LAJ19_15715 (topA)
DNA repair and recombination proteins [BR:
dtae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LAJ19_15715 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-ProteinID:
UBV44245
LinkDB
All DBs
Position
p_TS293_2:438719..440767
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AA seq
682 aa
AA seq
DB search
MATLVIVESPAKAKKIAGYLGQGYVVCASLGHVRDLPGSKGEIPERYRQEPWAALGVNPA
TFTPIYVVPPAKRQTVRELQQLARTADAVLFASDMDREGEAISYHLSRLLGVDQPVRMVF
TEITKDALQRALQTTRPLDLRLVAAQEARRVIDRLVGYRVSPLLWNSVGSKLSAGRVQSA
ALMLLAARDMARMTFRPATFWVIRAAAQTRPAFTATVTHVRSKDHPAGRPIAKASDYTQA
GVLKEGAQVLVMTGEQASALSAYLDGKDATVTRVDLTETRSRPAPPLITSTLQQAGSRLN
LSARRVMDVAQTLYEGGYITYMRTDSPALSDEALSEARREAARLFGPGAVPSQPRQYATR
NKNAQEAHEAIRPAGTTWRAPDTVGLTGDTLAVYTLIYQRTVASQMHDAVFDKTVVTLTC
GAATLSAQGRVLKDAGYLRLLQDDAGDPDDQNLPALTPGQQVPLRARPPEGKTTSPPTRY
TEATLVQAMEKAGIGRPSTYAQTVSTLQTRGYARLAGRHLAVTAVGLLVATYLARQVPPV
MHRDFTATMETGLDDVAAGHTTRVDYLTRFWTEGLAPIIGRASHEAPSLPLPHLEGTRLR
AAASGPHLVRGGQAAPLPPEVIPADLSEAEAVAIMQGGWTPPKQRRPRGAAHPDTSQAAR
PRKSMKAAPHKPRGAPKRKTKP
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggccaccctggtgatcgtcgagagcccggcgaaagcgaaaaaaatcgccggatacctc
ggtcagggctacgtcgtctgcgcctccctcgggcacgtgcgcgacctgccgggctcgaaa
ggggagatccccgagcgctaccgccaggaaccctgggcggccctcggcgtgaaccccgcg
accttcacgcccatctacgtcgtgccgcccgccaagcgccagaccgtccgcgaactccag
caactggcccggacggccgacgcggtgctgttcgcctccgacatggaccgcgaaggcgaa
gccatctcctaccacctcagccggctgctgggggtcgaccagccggtgcggatggtgttc
acggaaatcaccaaggacgccctgcagcgcgccctgcagaccacccggccgctggacctg
cgcctcgtggccgcgcaggaagcccggcgggtcatcgaccggctggtgggctaccgggtc
agtccgctgctgtggaacagcgtcggcagcaaactcagcgccgggcgggtgcagagcgcc
gccctgatgctcctcgccgcccgcgacatggcccgcatgaccttccgccccgccacgttc
tgggtgatccgcgcggccgcgcagacccgcccggccttcaccgccaccgtgacgcacgtc
cgcagcaaggaccacccggccggccggcccatcgccaaagccagcgactacacccaggct
ggcgtgctgaaagaaggcgcgcaggtgctcgtcatgaccggcgagcaggcgagcgccctg
agcgcctacctcgacggaaaggacgccacggtcacccgggtggacctcaccgaaacccgc
tcccgcccggccccgccgttgatcaccagcaccctccagcaggccggaagccgcctgaac
ctcagcgccaggcgtgtcatggacgtcgcccagacgctctacgagggcgggtacatcacc
tacatgcgcaccgactcgcccgccctgtcggacgaggccctgagcgaagcccggcgggag
gccgcccggctgttcggccccggcgccgtgccctcacagccccggcagtacgctacgcgc
aacaagaacgcccaggaagcccatgaagccatccggcccgccggcaccacctggcgcgcc
cctgacaccgtgggcctcaccggcgacaccctggcggtctacaccctgatctaccagcgg
accgtggcctcccagatgcacgacgccgtcttcgacaaaaccgtcgtgacccttacctgc
ggcgccgccaccctcagtgcccagggccgcgtcctgaaagacgccgggtacctccgcctc
cttcaggacgacgctggtgacccggatgaccagaaccttccggccctcacgcccggtcag
caggtgccgctgcgcgcccggccgcccgaggggaaaaccacctccccccccacccgctac
accgaagccacgctggtgcaggccatggagaaagccggcatcggccgccccagcacttac
gcccagaccgtcagcaccctccagacccgcgggtacgcccgcctcgccgggcggcacctc
gcggtcaccgccgtcggtctcctggtcgccacctacctcgcccggcaggtgccgccggtc
atgcacagggacttcacggccaccatggaaaccggactcgatgacgtcgccgccggacac
accacccgcgtggattacctcacgcgcttctggaccgaaggcctcgcccccatcattggc
cgggcgtcccatgaggcgcccagcctgcccctgccgcacctggagggcacccggttgcgc
gccgcggcgtccggcccccacctggtccgcggagggcaggccgcgcccctgccgcccgag
gtgattcccgccgacctgagcgaagcggaggcagtggccatcatgcagggtggctggacc
ccgcccaaacagcgccgtccgcgcggcgccgcgcacccggacaccagccaggctgcccgc
ccacgcaagagcatgaaagcggcgccgcacaaaccgcgcggcgccccgaaacgcaagacg
aaaccgtga
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