Desertifilum tharense: BH720_009700
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Entry
BH720_009700 CDS
T10907
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dtb Desertifilum tharense
Pathway
dtb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dtb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BH720_009700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dtb03019
]
BH720_009700
03016 Transfer RNA biogenesis [BR:
dtb03016
]
BH720_009700
Enzymes [BR:
dtb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BH720_009700
Messenger RNA biogenesis [BR:
dtb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BH720_009700
Transfer RNA biogenesis [BR:
dtb03016
]
Prokaryotic type
tRNA degradation factors
BH720_009700
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
MGM9498471
UniProt:
A0ACG5FHN3
LinkDB
All DBs
Position
complement(2285399..2287549)
Genome browser
AA seq
716 aa
AA seq
DB search
MGEIDKSISFNGRDIRLKVGLLAPQAGGCVLIQSGDTAVLVTATRAEAREGIDFLPLLVD
YEERLYAAGRIPGGFLRREGRPPEKAILTCRLIDRPLRPLFPGWLRDDIQVVATTLSMDE
QVPPDILAVTGASLAVLLAKIPFHGPMAAVRVGLVGDDFIINPTYHEIEQGDLDLVVAGS
PDGVIMVEAGANQLSEADMIEAIDFGYEAVADLIQAQRDLLAELELEITQGQAPEVDPTL
ENFIRDRATDSVKGILARTELDKHARDQALDEVKQTQVLNAIAELGEEDPIRVAAAADAK
AVSNLFKDLTKKMMRKQIIEDGIRVDGRKLDEVRPISCRTGVLPPRVHGSALFNRGLTQV
MSVVTLGTSGDAQELDDLHPDEQKRYLHHYNFPPYSVGETRPMRSPGRREIGHGALAERA
IVPILPPKEDFPYVIRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPISKPVSGAAMGLIK
EGEEVRILTDIQGIEDFLGDMDFKVAGTDTGITALQMDMKITGLSMDIVKQAIEQARPAR
LHILERMLATIDQPRTELSPFAPRLLTMKIDPDLIGMVIGPGGKTIKGITEETGAKIDIE
DDGTVIISSIDAEKAKQARSIIMGMTRKLNAGDVYMGRVTRIIQIGAFVEFLPGKEGMIH
ISQLADYRVGKVEDEVTVGDEVIVKIRDIDNKGRINLTRLGIHPDEAAAAKVATQQ
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaattgataagtcaatatcttttaatggacgagatattcgactcaaagtagga
ttattagcaccccaagccggaggctgcgtcctgattcagtctggagatacggctgtttta
gtgaccgcaacccgtgcagaagctagagaaggaattgatttcctgccattattagtcgat
tacgaagagagactgtacgccgcaggtcgcatcccaggcggatttttacgtagagaaggg
cgtccgccagagaaagcgattttaacctgtcgtttaattgaccgcccgctgcgtccgttg
tttccgggttggttgcgcgacgatattcaagttgtggcaactaccctatcgatggacgaa
caggttcccccggatattttagcggtgacaggcgcatctttagccgtattgttggccaaa
attcccttccacggcccaatggctgcggttcgggttgggttagttggcgatgattttatt
attaaccccacctatcatgaaattgaacaaggcgacttagatttagttgttgccggttcg
cccgatggggtgattatggtggaagctggggccaaccaattgtccgaagccgacatgatt
gaagccattgattttggctatgaagcggtggcggacttgattcaagcccaacgcgactta
ctggccgagttggagttggaaattacccaaggtcaagcgccagaagtcgatcctacccta
gaaaactttattcgcgatcgcgctacggattcggtcaagggaattttagcccgtaccgaa
ctcgataaacacgcccgcgaccaagccttagatgaggtgaaacagacgcaagtcctcaac
gcgatcgcagaactaggcgaagaagaccccattcgcgttgcggctgcggccgatgccaaa
gccgtcagcaacctctttaaggatttaaccaaaaagatgatgcggaagcaaatcatcgag
gatggcatccgcgtagacggccgcaaacttgatgaagtccgccctatctcctgccgtacc
ggagtcttaccgccccgcgtacatggtagcgccctattcaatcgcggtttaacccaagtc
atgtctgtggtaacgctaggcacctctggcgacgcccaagaactcgacgacttgcacccc
gacgaacagaaacgctatctacaccactacaacttccccccctattctgtgggagaaacc
aggccgatgcgatcgcccggtcgtcgggaaattggtcacggggccttagccgaacgcgcc
atcgttccaattctgcccccaaaagaagacttcccctacgtcatccgcgtcgtttcagaa
gtcctctcctccaacggttcgacctcaatgggttcggtgtgcggttctaccctcgccctg
atggatgcgggcgtccccatctccaaacccgttagcggtgccgcaatgggcctaattaaa
gaaggagaggaagtccgcatcctcactgatattcaaggcattgaagactttttaggggac
atggactttaaagtcgcaggtaccgataccggaattacggccctgcaaatggatatgaaa
atcaccgggttatcaatggatatcgtcaagcaagccattgaacaagccagacccgcccgc
ctacatatcctagagagaatgctggccaccatcgaccagccgcgcaccgaactctcaccc
tttgccccgcgcttgctgaccatgaagatcgatcccgatctaattggtatggtaatcgga
cctggcggtaaaaccattaaaggcattaccgaagaaaccggggccaaaattgacattgaa
gatgatggcaccgtcattatctcttcaattgatgctgaaaaagccaaacaagcccgcagc
atcatcatgggcatgacgcgcaagctaaatgcaggtgatgtctatatgggtcgcgtaacg
cgcattatccaaattggggcctttgtagaatttctccctggtaaggaagggatgattcac
atctcccaacttgcagattaccgcgtgggcaaggtcgaagacgaggtgacagttggcgat
gaagtcatcgtcaaaatccgcgacatcgacaacaaaggtcgcattaacctcacccgccta
ggcatccaccccgacgaggccgcagccgcgaaggtagcaactcagcagtag
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