Dendrobates tinctorius (dyeing poison frog): 141046554
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Entry
141046554 CDS
T11000
Symbol
NUP188
Name
(RefSeq) nucleoporin NUP188 isoform X1
KO
K14311
nuclear pore complex protein Nup188
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Pathway
dtc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141046554 (NUP188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dtc03019
]
141046554 (NUP188)
Messenger RNA biogenesis [BR:
dtc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141046554 (NUP188)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
BID
Motif
Other DBs
NCBI-GeneID:
141046554
NCBI-ProteinID:
XP_073397100
LinkDB
All DBs
Position
Unknown
AA seq
1766 aa
AA seq
DB search
MWLVMATWNIASPQTKCLKCCCQSLRSDHLPGSPSCVFVLKGSSRELWTILLGRSAMRDP
IQIKAELDHYGERLLQGLSFYKAPRTSSADKVKANKNLAPAMKDLGQRISKFLGLDEEQS
VQLLQCYLQDDYRGTQDSIKMVPQDERQSQALMLKIADYYYEERICMLRCVLLLLTYFQD
EKHPYKKEFNDCMDMLQREDLMGKYCKHFEDLCKEEAPTWETHGNLMTERQVSRWFAQCL
REQAMLLEIIFLYYAYFSISPSNLLALAKLFKEQGFGRRQQNRHLIEQSFDPLIDRIGYF
EVLILLEGIDMDSVQDYVFKDELEHPFTNEQQFCKDMDNILLTFGDIPHHAPVLLAWALL
RHTLSPDEGATTIRKMGSIAVQLHVFKYLTSMLRALGSGENNCTTSTACLCVYSLLCFAL
TSMEEHTLGKQQDIIDTACQVLTAPNLSDLFWNTDTTIGLGILLDSVCTMFPYQLAPLLQ
LFTALVSNKSTARKAYSFLDRMAFYTEHYKHKPHDVMSHDDETLWRRQSTKLLYALGLGQ
TNLRIPQGTVGQVMSEERGFFVRWEYSFSSWTLFTCEVEMLLHVVSTADVILHCHRVKPI
IDLGHKVINTDLSIADYLLPITSRIYMLLQRLTTVMNPPMDFIASCVNCLTALATRMPGK
VWTDLHHTGFLPFAASSSGHIISTENMNAGGYGTLLGIEQSHGEYSVTISFLRLVTTLVK
GQLGSMQSQGLVPCILFVLREMLPNYHRWRYNSHGVRENLGYLILNLIHAILNLCPDLDP
QSSPPNLQSLCIVSLTNTEAGQAIINIMGIGVDTINVIMASQAGSSGTEGQGQMLIQTVK
LAFSITNNVIRLKPPSCGVSPLEQALTQHGAHGNNLIAVLAKYIYHKYDASLPRLAIQLL
KRLATVAPMSVYACLGSDAAAIRDAFLNRLQCSIEDMQIKVMILEFLTVAVETQPGLIEL
FLNLEVKDTNGTKEYSLGQWSCLQVVLDLIDLQKSDRFWCTPQLHRSAIAFLHALWQDRR
DSAMTVLRTKPNFWENLTAPLFGTLVPPSESSDLSVLETCAFIVRIICLEIFYAVHGLLD
KSLNSILEKFFKDGRFTYWSNYMHSLVQRVAETEGNCSSLTEYQMLLSAWRILLIISTHY
ADVMHLTDKGVKQELFQDILSGTEILFQVPSSAPCLQLGFMLCTLMMILLRRWKNELNSP
EDILKSLARILDGILQADKQLMEKAKARIFSALICVLEMKHMTVSSIPQYQQLVLSICEN
LQDEVMSLIDETRHGLETGDGAEDRDSMETDDLPRTRHKDQRDTVCVLALHLAKELCQAD
EDGDQWLQVIRQLPVLPMLFSALEISLRGKQNLHFCEASFHLLFTLAKTHQGAASIASAG
ITQSMCLPLLSVYQLSMNGASTAQPPLSSRKAVDAPSWPGVYRLTVSLMERLLKTLRYNF
LTDALDFLGVHQERILQCLSAVRTVQSLSCLEEADHTVGFLLQLSNFSKEWHFHLPQLMK
DIQVSLCYLCQSCTSLLYSRKMLRHYLQIKSVEAVTSGSTSRGQRTPQTPSKQPKPETEA
LELRALRSVQHSLLKILSKTLAALRAFTPDLCQILQPLDLAQYQLLLALNFSTPAFDTDI
SPSFGTFLATVNVMLNMLGEMDKKKDPPFPSAAPASPSEESKTIKPLLLFIIENCFYLTI
SQAVRYLRDPSVHPRDKQRMKQELGSELSTLLSSLNRYTRRGFPSSPAAGVLPSPQPKAG
PSAKAAPEAQEPIIQLVQAFIRHVQR
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggtgatggccacgtggaacatcgcgtccccccagaccaagtgccttaaatgc
tgctgtcagagcttgcgatcagatcatctgccgggttcgccttcatgtgttttcgtctta
aaggggagcagccgggagctgtggacaattctacttggccgctctgctatgagagatccg
atacaaatcaaggcagagctggaccactacggagaaaggctcctgcagggattgtccttt
tacaaagcacccagaacaagctccgcagacaaggtgaaggctaacaagaacttggctcca
gccatgaaagatctcgggcagagaatcagtaaatttctgggtctggatgaggagcagagc
gtgcagctgctgcagtgctacctccaggatgactacagggggacacaagactctattaag
atggtaccacaggatgaaaggcagagccaggcactgatgctgaagatagcagactattac
tacgaggagagaatctgtatgctgcgctgcgttctgctgctgctgacttacttccaggat
gaaaagcatccgtacaagaaagaatttaatgactgtatggatatgctgcagcgggaggac
ttgatgggcaaatactgcaagcactttgaagatctctgtaaagaagaagcacccacgtgg
gaaacccatgggaacctcatgaccgaacgtcaggtgtcccggtggtttgcgcagtgtcta
cgagagcaggcaatgttgctggagatcatcttcctctattatgcctacttttccatctcc
ccctccaacctcctggcactcgccaagctgttcaaagaacaaggttttggacggagacaa
caaaatcgtcacttgattgagcaaagctttgaccctttaatagaccgaatcggatatttt
gaagttctcatcctgttggaaggcatcgacatggactctgttcaggactacgttttcaag
gatgagctcgagcacccttttaccaacgagcagcagttctgtaaggacatggacaacatc
ttgctaacgtttggggatatccctcaccacgctcccgtcctcctagcctgggctctgctg
cggcacactctgagtccagatgaaggggccacgaccatccgaaaaatgggcagcattgcc
gtccagctccacgtgttcaagtatttgacaagtatgctgcgagcccttggtagcggtgag
aataattgtaccaccagcacggcatgtctgtgcgtctacagtctgctgtgttttgccttg
acttccatggaagagcatacgttgggcaaacagcaggatattattgatacggcttgtcaa
gtgctgaccgccccaaacctctcagatctcttctggaatacggacaccaccataggcctc
gggatcttactagacagcgtgtgtacaatgttcccctatcagttggctccgctgcttcag
ttgtttactgctctcgtctcaaacaagtccacggctcggaaggcctatagcttcctggat
aggatggcattttacaccgagcattataagcacaagccccacgatgtcatgtcacatgat
gatgagacactgtggaggagacagagcaccaaactgctgtatgctttagggctgggccag
accaatctgcgtattcctcaggggacagttggtcaagtgatgtctgaggaacgtgggttc
tttgtgcgctgggaatactcgttcagtagctggaccctcttcacctgcgaggttgagatg
cttcttcacgtggtgtccacggctgacgttatcctgcactgtcacagagtaaagcccatc
attgaccttgggcacaaagttattaacacagacctgtccatcgcggattaccttctcccc
atcacctctcggatttacatgctattgcagaggttaacaacagtcatgaaccctccaatg
gatttcattgcctcctgtgtgaactgcctgactgctttagccacacggatgcctggaaag
gtctggacagatttgcaccacacaggatttcttccctttgctgccagttcatcaggacac
attatcagcactgaaaatatgaatgcaggaggatacgggacactgctggggattgagcag
tcgcacggggaatacagcgtcacaatatcgttcctccgccttgttactacattagtgaag
ggtcagctgggcagtatgcaaagtcagggactcgtgccctgcattctgttcgtgttacga
gaaatgcttcctaattaccacaggtggcgctacaactctcatggagtgagagaaaacctt
gggtacctgatcttgaatttgattcatgccatcctcaacctgtgcccagatctggatccg
caaagcagccccccaaatctgcagagcttgtgcatcgtcagtctgaccaacaccgaggca
ggacaggccatcattaacattatggggatcggtgtggatacaatcaatgttatcatggcc
tctcaggctggaagcagtggaacagaaggacaaggtcagatgttaatccaaacggttaaa
ttggcattttccataaccaacaatgtcatccggttgaagcccccatcttgtggtgtgtcc
cccttggagcaggcgctgacgcagcatggagctcatggaaacaacctgattgcagtcctg
gcgaaatatatttaccataaatacgatgcctcgttgccccggctggccatacaactgctg
aagcggctggcaactgtggcccccatgtctgtgtacgcctgtctgggaagtgacgctgct
gcgatccgggatgcctttctcaaccgcctgcagtgcagcatagaggacatgcagatcaaa
gtgatgattctggaatttctcacagttgctgtagagacccaaccagggctgatcgagctt
ttcctaaatttagaggtgaaagatactaatggaaccaaggagtatagtttggggcagtgg
agctgtctgcaagttgtcttggacctaatagatctccagaaatctgaccgattttggtgc
acgcctcagctacaccgctctgccattgctttcctccacgccttatggcaggatcgtcgt
gacagtgccatgaccgtcctaagaaccaagcccaatttctgggagaacctaacagcacct
ctcttcgggacacttgtgcccccctctgaatcctcagatctgagcgtcctggagacctgc
gctttcatcgtgaggattatctgcctggagatcttctacgcggtccatggattactggac
aagtctctgaacagcattcttgagaaattcttcaaagatggacgctttacctactggtcc
aattacatgcactcgctggtacaacgcgtcgcagagacggagggcaactgcagttcactc
acggagtaccagatgctgctgtccgcctggcgaattctgctcatcatttccacacattat
gcggatgtgatgcacttgacagacaagggtgtaaagcaggagctattccaggacatctta
tctggaacagaaatcttgtttcaggtccccagctcggctccttgtttgcagctcggcttc
atgctttgcactttaatgatgattttactccgacgctggaagaacgaactgaactctccg
gaggacattctcaaatctctggcgagaatcctggatggcattctgcaggcggataaacag
ctaatggagaaagcaaaagcgcgaatcttctcagccctgatctgcgtattagaaatgaag
cacatgacagtcagcagtattcctcagtaccagcagctggtcctcagcatatgtgagaac
ctacaggacgaggtgatgtcgcttatagatgagacgcgccatggtcttgagactggagat
ggagctgaggacagggacagcatggagactgatgatctgcccagaacgaggcacaaagat
caacgtgatacggtttgtgtgctggcattacacttggcaaaagagctgtgccaggccgac
gaagatggagaccagtggctacaggttatcaggcagctgccggtgttgcccatgctgttt
agcgccctagagatcagcctccggggcaaacagaacctgcatttctgtgaggcttctttc
cacctattgtttacattggccaaaacgcaccagggtgcagcgtccatagcgagtgctggt
atcacacagagtatgtgtctgcctctgctgagtgtctaccagctgagcatgaatggtgcg
agtacggcacagccgcccctctcctcccgtaaagctgtcgatgccccttcttggccgggc
gtctaccgtctgaccgtatctcttatggagcggctgctgaaaacgctgagatataatttc
cttacagatgccttagactttctaggtgttcaccaggaaaggatattacagtgcctgagc
gcggtccgcaccgtgcagagcttatcttgtctggaggaggccgaccacactgtcggcttc
ttgctgcagctttccaacttctccaaagaatggcatttccacctgccgcagttaatgaag
gacattcaggtcagtttatgttacctgtgccaatcctgcacctctctgctgtacagccgc
aagatgctgcggcattacctccagataaaaagtgttgaagctgtgacatctggttcaacc
tctcgtggtcagcgcacacctcaaactccatccaagcagccgaaaccagaaactgaggcc
ttggagctgagagcgctgcgctccgtccaacacagtctactgaagatcctcagtaagacg
ctggccgcgttgcgagcattcacacctgatctctgccagatacttcagcctctggatctt
gcacagtatcagctgcttttggccttgaactttagcaccccggcatttgatacagatatt
tccccatcatttggcacgtttctggcgactgtaaatgttatgctcaacatgcttggagag
atggataagaaaaaagatcctccatttccatctgctgctcctgcaagtccttccgaggaa
agcaagaccatcaagccgctgctgctgttcatcatcgagaactgtttttacttgaccatc
tcacaagcggtgcgatatctgcgggacccctcagtgcacccccgggacaagcagcgcatg
aagcaggagcttggatctgaactgagcacccttctctctagtctgaatcgctacactcgg
cgggggttcccgtcttctcctgccgcaggggtgctgccctcgccacaacccaaagctgga
ccttctgccaaggcagcgcctgaggctcaggagcccattatccagctggttcaggccttt
ataaggcacgtacagagataa
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integrated database retrieval system
