Dendrobates tinctorius (dyeing poison frog): 141046712
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Entry
141046712 CDS
T11000
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dtc01009
]
141046712 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dtc03019
]
141046712 (HDAC6)
04131 Membrane trafficking [BR:
dtc04131
]
141046712 (HDAC6)
03036 Chromosome and associated proteins [BR:
dtc03036
]
141046712 (HDAC6)
Enzymes [BR:
dtc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
141046712 (HDAC6)
Protein phosphatases and associated proteins [BR:
dtc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
141046712 (HDAC6)
Messenger RNA biogenesis [BR:
dtc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
141046712 (HDAC6)
Membrane trafficking [BR:
dtc04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
141046712 (HDAC6)
Chromosome and associated proteins [BR:
dtc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
141046712 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
141046712
NCBI-ProteinID:
XP_073397420
LinkDB
All DBs
Position
Unknown
AA seq
1182 aa
AA seq
DB search
MFQSCRSRGCDQETMASPPERTSPRRRGTGGSTGPSSSKKPGKKGQPSPTGGPGLQEVKR
RGYHMRKTPERQLCDQLDGLHLGTELPAVGTGLVYDDRMTEFFCLWDDKFPECPSRLLAV
KEKLVEYGLLERCTSVPAREASEEELLLVHSKEYVELMKSTQKMTEEELRALSDKYDSVY
LHPLSFSGSRVAAGSVLQLVDKVVSREIRNGLAVVRPPGHHAFRDQMNGYCMFNQLAIAA
RYAQRQHGVKRVLIVDWDVHHGQGTQFIFESDPSVLYFSIHRYENGEFWPHLVESSSTAV
GKERGEQYNINVPWNKTGMSDPDFITAFLHLLLPVSYEFQPQLVLVAAGYDSVVGDPKGE
MSATPACFAHLTHMLMCLAEGRLVLSLEGGYNHRSLAEGACSSLKILLGDPCPHLRQPFR
PCESALDSISGAISVHRKYWRCLQGQDLTLKLESGSNKVTTEENSVVELGEDLTVTLDTA
MREVMRKLPVSRTGLVYDEQMMEHYNMWDSGHPELPQRIARIFKRHKEMGLVDRCTRLPH
RMATTKELQMCHSLPYIQKIEKSSQMKPRDLHRVGSEYNSIYINNRSYHSACLAAGSSFS
VVEAVVKGEVQNGVCIVRPPGHHAEPGAACGFCFFNNVALAARYAQSLQIPSEPPLRVMI
LDWDIHHGNGIQHIFQDDPSVLYVSLHRYDDGTFFPRSDDAAFNKVGSGPGEGFNVNIPW
NGGKMGDVEYLLAFHRIVMPIAYEFNPQLVLISAGFDAARGDPLGGCRVSPEGYAHMTHL
LMGLAGGKVVLVLEGGYNLTSISDSMSMCTRTLLGDPPPIISDLHAPRPAALRAISSVLG
VHQKYWRTLRINAEPSVPSEAEVLSPHKNVEPGLSSPHHGSLGKPIVSTTSPLKPDLEDF
LQEQSPLMAGGGSPRGRTTVIQDADTRTKEELGGDIVESMKVGLVSSPALQERLDEEDKN
MEAGPDQSYDGDTLELVIELHMSDKTPEKQKSTPAAGGSVEDLLRNLHLGDVKSPDGDSA
PVGGARKKTSMGRQSAGAQFADKVPLADSAGGDCFPSYEADADPCPGFSGELFSVTPLPW
CPHLESVRALPSGGLDVTEPCAVCGTQVENWVCLTCYQVLCGRYISQHMMTHGASSGHSM
VLSFSDLSVWCYGCDAYIHNEVLIPAKQSAYHCKFGEEMPGA
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgttccagtcctgcaggtccaggggctgcgaccaggagaccatggcctctcctccagaa
aggacgtcacccagaagacgaggaacaggcggctcaaccggaccctccagctcgaagaag
cctggaaagaaggggcagccatcccccaccggtggtcctggtctacaagaggtaaagagg
agaggctaccacatgaggaagaccccagagagacagctctgtgaccagctggacggactg
cacctgggtacagagcttcctgcagtaggaacaggcctggtttatgacgaccgaatgact
gaattcttctgtctctgggatgataagtttcctgagtgtccttctcgtcttttggctgtg
aaggaaaaactagtggagtatgggctgttggagcgctgcacgtcggtgccggcgcgggaa
gcatcggaggaggagctgttgctggttcacagcaaagaatatgtagagttaatgaaatcc
acacaaaaaatgacagaggaagagctgcgagcactatcagacaaatatgactcggtctac
ctgcacccactgtccttctctggttcccgtgtggccgccggctctgtgctgcagttagtg
gataaggtggtgagccgggagatccgtaacggtttggcggtggtgcgtcccccagggcac
cacgccttcagggaccagatgaacggttactgcatgtttaaccagctagccattgctgcc
agatatgctcagcgccagcacggggtgaagcgggtcctcattgtggactgggacgttcat
catggacaaggcacacagtttatatttgagagcgaccccagtgtcctttatttttctatt
catcgctatgaaaatggagaattttggccacatctggtggagtcttccagcactgctgtg
gggaaggagaggggcgagcaatataacataaatgtgccttggaataagactggaatgagt
gacccagacttcatcacagccttcctgcacctcctcctgcctgtctcctacgagttccag
cctcagcttgtgttggtcgcagccggatatgactccgtggttggagatccgaagggggag
atgtccgccaccccagcatgcttcgcacacctcacccacatgctcatgtgtttggctgaa
ggaaggctcgtgctctctctggagggaggttacaaccatcgttccctggcagaaggtgcc
tgctcctcattgaagattctgcttggggatccgtgcccgcacctgcgtcagcctttcaga
ccctgcgagagtgctctggactccatttctggcgccatctctgtccacagaaagtactgg
cggtgtctgcagggtcaggatttaaccttaaaactggagagtggaagtaataaagtgacc
acagaggaaaacagtgtcgtggagttaggggaagacctgacggtgactctagataccgcc
atgcgggaagtgatgaggaagcttccggtgtcgcgcactgggctggtgtacgacgagcag
atgatggagcactacaacatgtgggacagtggtcaccccgagctcccgcagagaattgct
cggatattcaagcggcacaaggagatggggctggtagatcgctgcacgcggctcccacat
cgcatggcaactactaaggagctacagatgtgccatagcctcccctacatacagaagatt
gagaaaagctctcaaatgaaaccgagggacctgcacagggtgggctccgagtacaactct
atctacatcaacaacaggtcctatcacagcgcttgcctggctgcgggctcctcgttcagt
gtggtggaggccgtagtaaagggagaggtccaaaatggagtttgcatagttcgccctccc
gggcaccatgccgagccgggcgccgcatgtgggttttgcttctttaacaatgttgccttg
gcggcacgatatgcccaaagtcttcagatcccttcagagcctccgctaagggtgatgatt
ctggactgggacattcaccatgggaacgggattcagcacatattccaggatgacccgagc
gtcctgtatgtatcactccaccggtatgatgacggcacgttcttcccgcgctctgatgac
gccgcgttcaataaggtaggaagcggcccaggcgaaggattcaacgtgaacatcccctgg
aatggtggaaagatgggtgacgtggagtacctgctggccttccataggatcgttatgccc
attgcttatgagttcaacccacaacttgttttgatctctgcgggatttgatgccgcccgc
ggagacccactcggaggctgccgtgtcagtccggagggctatgcccacatgacgcatctc
ctgatgggcctggctgggggcaaagtggtgctagtgcttgagggtggatacaacctgaca
tccatctctgactccatgtccatgtgtacccggacgctgctgggtgatccccctcccatc
atatctgacctgcacgccccacgtcctgccgccctgcgtgccatctccagtgtgctaggg
gtacatcagaagtattggcgtaccctgcggataaatgctgaaccttctgtgccatccgag
gcagaagtcctgtcaccacataagaacgtggagcccggtctgtcgtcaccccatcatggc
agtcttggaaagccgattgtgtccacgacgtctcctttgaagccggatctggaggacttc
ctacaagaacagtcgccattgatggccggaggtggttcaccaagaggcagaactactgtg
atccaggatgcagacaccaggacaaaggaggaacttggaggggacattgtggagtctatg
aaggtgggtcttgtctccagtcctgctcttcaggaacgactggatgaggaggacaagaac
atggaagcaggacctgatcagtcctatgatggagacactctggagctggtcatagagctg
cacatgtccgacaagaccccggagaaacagaagtccacgcctgcagccgggggctcggtg
gaggatctcttaagaaacttgcacttgggagatgtcaagtctcctgatggtgacagcgcc
ccagtcggaggagcaaggaaaaagacctcgatggggagacagtctgcaggagcacagttt
gcagataaggtgccgcttgctgactctgccgggggggattgtttcccgtcctatgaagca
gacgcagacccgtgccctggattctctggggagctattctctgtgacgcccctgccctgg
tgtcctcacctggagtcggtgcgtgcactgccctctggtggactggacgtgacggagcca
tgcgcagtgtgtggcacacaggtggagaactgggtctgtctcacgtgttaccaggttttg
tgtggaaggtacatctcgcagcatatgatgactcacggagcctcgtccggccacagcatg
gtgctgagcttctccgacctctctgtctggtgctacggctgtgatgcctacatccacaat
gaggttctcattccagcaaagcaatccgcttaccactgcaagtttggggaggaaatgccc
ggagcgtaa
DBGET
integrated database retrieval system
