Dendrobates tinctorius (dyeing poison frog): 141049322
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Entry
141049322 CDS
T11000
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Pathway
dtc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141049322 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dtc03041
]
141049322 (PRPF40A)
Spliceosome [BR:
dtc03041
]
Complex A
U1 snRNP components
U1 related factors
141049322 (PRPF40A)
Complex B
141049322 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
DUF4936
WW_2
Motif
Other DBs
NCBI-GeneID:
141049322
NCBI-ProteinID:
XP_073401731
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MYRTYWSELFPAAISASGDGTNGPSQPGLYPDGARMMRGQYMNPVAHYSAVGLGGLPPRP
GLAPPGLIPPLMGPMSTHQMGQVGYIMTPMIPPLMSGMMMTTHVAPGTLPVGMQPGVNSM
DPTLAQPTISPAPHPVISAPPSITTNSTSNDEPAKPKSMWTEHKSPDGRIYYYNIETKQS
TWEKPDEMKTAVEQMLSKCPWKEFKSDSGKPYYYNSQTKESRWAKPKDLEDLEALIKAEE
NGSVQDPASSAVVPSVQTAQAPEVVSTTTPVSIIAEPEIVMSTPTTPAIDTENMVNDSVE
EMAYSVSSSFQEKDHEVSSSGFIEEFSKQEVLPDSLSLEEPEEEKAPKKTYTWNTKEEAK
QAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEAR
LKYKEAKESFQRFLENHDRMTSTTRYKKAEQMFTELDVWNGISERDRLEIYEDVLFYLAK
KEKEQAKQLRKRNWEALKNILDNMANVTYCTTWSEAQQYLMDNPTFAEDEELQNMDKEDA
LICFEEHIRALEKEEEDDKQKTLLRERRRQRKNRESFQVFLDELHEHGQLHSMSSWMELY
PTVSSDIRFANMLGQPGSTALDLFKFYVEGLKARYHDEKKIIKDILRDKGFVVELRTTFE
DFVMVISSTKRATTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQA
APSIEVDSVWEEVRERFIKEAAFEDITLESERKRIFKDFVHALEHECQHHHTKNKKHSKK
SKKHHRKRSRSRSGSESEEEEENHTKKKRQRSDSRSGSEHSTSGESEKSYKKAKKHKKKS
KKRRHKSNSPESEVEKDREREKKERDRERDKENDRERSRQKTDSKQKSPKRKPVKDSGNW
DTSGSELSEGELEKRRRTLLEQLDDDQ
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgtatcggacgtactggagcgagctgttcccggctgctatcagtgcatcaggcgatggt
accaatgggccaagtcagcctggtctgtatccagacggtgctcgcatgatgagggggcag
tatatgaaccctgttgcccattactccgctgtgggattgggggggctacctccaaggcca
gggttggccccaccaggcctgattccacctttgatgggaccaatgagcactcatcagatg
ggtcaggtaggttacataatgactcctatgattcctcctctcatgtctggcatgatgatg
actacgcacgtagcgcctggcacgttaccagtaggcatgcagcccggtgtaaacagcatg
gatcccacactagctcagccgacaatttcaccggcaccgcatcctgtaatttcagcacca
ccatcaattacaactaatagcacctctaatgatgaaccagccaaaccaaaatctatgtgg
actgagcataaatcaccagatggtaggatatattattataacattgaaaccaagcagtct
acatgggaaaagccagatgaaatgaaaaccgcagtggagcaaatgttatccaaatgtcct
tggaaagaattcaaatccgactctgggaagccgtactactacaattcccagacaaaggag
tctcgttgggccaaacctaaggatctggaggacctagaagcattgatcaaggcagaagaa
aatggcagtgtacaggatccagcatcttctgcagttgtaccgtccgtccagaccgcacaa
gccccggaggtggtcagtaccaccacacctgtctcaatcattgcagaaccagaaattgtg
atgtccacccccaccactcccgccatagacactgaaaatatggtgaatgattctgtggag
gagatggcctattccgtatcatcgtcctttcaagagaaggatcacgaagtcagcagcagc
ggtttcatagaagaattctctaaacaagaggttttgccagactcgttgtctctagaagaa
cctgaagaggaaaaagcacccaagaaaacctacacttggaacacgaaagaggaagccaag
caagcatttaaagagctcctaaaagaaaagcgagtgccgtccaatgcgtcctgggagcag
gccatgaaaatgatcattaacgatcccagatacagcgcccttgcaaaattaagtgagaaa
aaacaagcgtttaatgcttacaaagttcagactgaaaaagaagaaaaagaggaggccagg
ctgaaatataaggaggcaaaagaatctttccagaggtttctagaaaaccacgataggatg
acctccaccacccgatacaaaaaagcagaacagatgttcacagagttagacgtctggaat
ggaatttctgaacgtgaccggcttgagatttatgaagatgtcttgttctacctagcaaaa
aaagaaaaggagcaagcgaagcagctgaggaagcggaactgggaggctttaaaaaacatc
ctggacaacatggcgaatgtaacctactgtaccacttggtcggaagcccagcaatacctt
atggacaaccctacatttgctgaagatgaagaacttcagaatatggataaagaagatgct
ttaatatgctttgaagagcatattcgtgctttagaaaaggaggaagaggacgataagcaa
aagactttactacgggaaagacggcggcagcgtaaaaacagagaatctttccaggtattt
ttagatgaattgcacgaacacggtcagttacattccatgtcgtcttggatggaattgtat
cccaccgttagctctgacattcgctttgccaacatgcttggtcagccaggttccacggcc
ttagatcttttcaaattttacgtggagggtctgaaagctcgatatcacgatgagaaaaaa
attatcaaagatatattgagggacaaaggatttgtggttgaacttcgcacaacgtttgaa
gactttgttatggttatcagttctacaaaaagggccacaacgttagatgctggaaatatc
aagcttgcttttaatagtcttttagaaaaagctgaggctcgggaacgagagcgtgaaaaa
gaggaagcccgaaaaatgaagagaaaggaatccgcattcaagagcatgctaaaacaagct
gcaccctctatcgaagtagactctgtttgggaagaggtacgggagaggtttattaaagag
gcagcatttgaagacattaccctggagtctgaacggaagaggatatttaaggattttgtg
catgcactcgagcatgaatgtcagcatcatcatacgaaaaataagaagcattcaaagaag
tctaaaaaacaccaccgcaagagatcgcggtctcgctcgggctctgaatcggaagaagag
gaagaaaaccacacaaaaaagaaaaggcaacgatcagactctcgttcgggctctgagcat
tccactagtggagaatcagaaaaaagctacaaaaaggcaaaaaagcacaagaaaaagagc
aaaaagaggaggcataagtcaaattctccagaatctgaagtagagaaagaccgagaaaga
gaaaagaaagaaagagaccgagagagagacaaggaaaatgacagagagcgctcaagacaa
aaaactgattcaaaacagaaatctccgaaaaggaaaccagttaaagactctggtaactgg
gacacatctggaagtgaattaagtgaaggagagctagagaagcggagaagaaccctcttg
gagcaactggatgacgatcaatag
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