Dendrobates tinctorius (dyeing poison frog): 141050932
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Entry
141050932 CDS
T11000
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Pathway
dtc04382
Cornified envelope formation
dtc04510
Focal adhesion
dtc04512
ECM-receptor interaction
dtc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141050932 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141050932 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
141050932 (COL4A5)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
141050932 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dtc04147
]
141050932 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
dtc00536
]
141050932 (COL4A5)
Exosome [BR:
dtc04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
141050932 (COL4A5)
Glycosaminoglycan binding proteins [BR:
dtc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
141050932 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
141050932
NCBI-ProteinID:
XP_073403743
LinkDB
All DBs
Position
Unknown
AA seq
1676 aa
AA seq
DB search
MRLGHLHCLPVLALVLLVHWVPNADSAACQGCTSKCDCSGVKGDKGERGLPGLEGQLGLP
GFPGPEGPPGSRGQKGDDGTPGPLGPKGIRGPPGLPGFPGAPGLPGLPGQDGAPGPAGIP
GCNGTKGDRGFPGGSGIPGLQGPQGPPGLPGLKGEPGEVNGFSQPGHKGEPGLPGLPGLP
GLLGSQGVQGPVGRPGPAGLPGPPGSPGFPGAKGNMGLNFQGSKGEKGDPGLQGPPGPPG
QSTEQTQPKGESEVLKGEKGSKGQQGFSGPPGPPGPPGPSGGMKGQKGEPGELGKIGKPG
KEGRNGFPGIEGAPGERGFPGNSGRDGEKGQKGERGFPGPPGQIISGPDQTIGPKGNTGP
PGLIGSKGERGYPGLQGPPGFPGPPGTSATGSPGDPGFPGERGQKGDQGPPGISIPGTPG
ADGRVGPPGPPGPPGTSIGGVGELCMPGPPGLPGLQGDPGLSGERGQKGDTGDTCFNCIG
NDIQGQKGEPGQPGSPGSPGVPGYPGPKGDPGLPGLPGSPGQSGFSGSPGSTGRPGPKGD
PGDVVALPGLKGDKGDTGFPGPAGSPGFDGRPGRDGIPGLPGTKGEPGGLAFKGERGQPG
EPGLPGLPGDRGPLGPPGFGPPGPAGEKGVQGVSGRPGATGVPGVKGPPGQTVTEKGAKG
LQGPPGSSGPPGQPGEPGQPGQPGLPGLTGMKGDPGISGIGLPGPAGQKGFSGPPGPPGP
PGISGKPGLDGTPGQPGFPGPKGEPGFGLPGPQGQPGSPGLKGFQGPKGDSGFPGMPGAP
GRAGFDGSPGPKGDSGQNGLPGPPGSPGLPGSGGQGPPGPPGLPGPAGPPGLTGIPGDKG
SPGPPGFDTPGPQGDRGNPGFPGERGFPGPPGPPGFPGRDGVLGIKGGKGDMGVMGPPGP
AGPPGNPGSPGFPGPKGLDGFPGQPGSNGGPGAKGDQGERGLMGPPGSVVGGGLGSKGSK
GEPGQDGAPGFNGEKGFSGMPGSPGSPGSSGLPGSPGLPGPKGDSGFPGQSGLPGSPGPK
GNMGEMGLPGPSGEKGTPGQPGRPGSPGPPGFSGSKGEKGEPGLSGSGQPGLPGPKGEPG
PAGFPGNPGTKGEAGSPGLPGLSGVSGSKGDPGAPGFSGAPGLQGSKGLDGPSGNPGAPG
PPGPRGDSGRPGPPGSPGEKGQPGQDGIPGPAGLKGEPGLPGFGTPGTPGLPGGPGAKGE
PGFSGPPGSPGFPGSKGDSGYPGRSGSPGLPGQPGLPGISTPGPKGSTGPSGPPGRTGPP
GPEGPRGPPGNGGFKGDKGNPGIPGQPGFPGPKGDSGTSGLPGDPGRPGLNGMKGDQGVP
GVPGFPGMKGPSGPPGLAGFKGDTGSPGLQGSPGSPGPKGEIRTIPGPPGPPGRPGSNGP
SGPPGPPGLPGSLGPPGDSGRDGLPGFEGQAGRKGDRGLPGQPGSRGNQGPPGPDGVQGP
PGAPGSGSVAHGFLITRHSQATESPACPQGTSRIYDGYSLLYVQGNERAHGQDLGTAGSC
LRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMNMEPLRGRDIQPFISRCTVCEA
PAMVIAIHSQTIQIPPCPQGWSSLWIGYSFMMHTSAGAEGSGQALASPGSCLEEFRSAPF
IECHGRGTCNYYANSYSFWLATVEMSEMFSKPQSETLKAGDLRTRVSRCQVCMKRT
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgaggttggggcatttgcactgtctccctgtcctagccttggtgctgctggtgcactgg
gtgccgaatgcagactctgcggcttgtcagggatgtacatcaaaatgtgactgcagtggc
gtgaagggggacaagggagagaggggacttccgggattagaaggacagcttggtttacct
ggatttccaggacctgaagggccacctggatctcggggtcaaaagggtgatgatggcaca
ccaggaccactcggacccaaagggataagaggacctccaggacttccgggatttcctggt
gctcctgggttgcctgggttacctgggcaggatggagctcccggacctgctggaattcca
ggatgcaatgggacaaagggtgatcgtggctttccaggaggttcaggaattccaggtctt
caaggtccacagggtccccctggattaccaggtttaaaaggggagccaggagaagtgaat
ggtttttctcagccaggacataaaggggaaccagggctaccgggtctcccaggtttacca
ggtctacttggttcacaaggagttcagggtccagttgggcgtcccggacctgcagggtta
ccgggacctcctggttcacctggatttccaggagcaaagggtaacatgggcttaaatttc
caaggatccaaaggagaaaagggtgacccaggtcttcaaggaccccccggccctccaggc
caatcaacggaacaaacccaaccaaaaggcgaaagtgaagtcctaaaaggagagaagggc
tcaaaaggtcaacaaggattttctggaccccccggtcctccaggtcctcctggtccttct
ggaggtatgaagggacaaaaaggagaaccaggagaattaggaaaaataggcaagccgggt
aaagaaggaaggaatggatttcctggtattgagggtgctcctggtgaacgaggttttcca
ggaaattcaggcagagatggtgagaaaggtcaaaaaggtgaacgtggatttcctggacct
cctgggcagataatttctgggccagaccaaacaattggaccaaaaggaaacactggacct
ccaggattaattggaagtaaaggagagcgtggttatccaggtttacaaggtccacctgga
tttccaggaccaccaggtacctctgccactggttccccaggagaccctggctttccagga
gaaagaggacaaaaaggagatcaaggccctccaggaatatcaataccaggcactcctggt
gcagatggccgtgttggacctccaggaccacctggacctcctgggacttcaataggtggt
gttggagaattatgtatgccaggtccaccaggccttccgggcctccaaggtgatccaggt
ctttctggagaaagaggacaaaaaggtgacactggagatacatgtttcaactgcatagga
aatgacattcaaggccagaaaggagaaccaggccaacctggttctcctgggagtccaggg
gtgcctggttatcctggaccaaaaggtgatcctggtcttcctggtttgcctggttcccct
gggcaatcaggattctctggttctcctggtagcactggtcgccctggcccgaaaggtgat
cctggtgatgtggttgcattacctggactgaaaggagataaaggagacactggatttcca
ggaccagcaggaagccctggttttgatggtcgccctggaagagatggaattcctggactt
cctgggactaagggagagccgggtggtcttgctttcaaaggagaacgtggccaaccaggc
gaacctggcctccctggacttccaggtgatagaggtcccttgggtcctcctggctttggt
ccacctggacctgctggtgagaaaggagttcaaggagtttctggtcgaccaggagcaact
ggagttccaggtgttaaaggaccccctggccagacagtaacggaaaaaggggctaaaggt
cttcagggtcccccaggtagttctggcccaccagggcagccaggtgaacccggtcaacct
ggacaacctggacttccaggccttacaggaatgaaaggagatcctggcatttcaggaatt
ggacttccagggccagctggtcagaaaggattctcaggcccacctggaccaccaggacca
ccaggtatatcaggaaaaccgggattagatggaacacctggacagccaggtttcccagga
ccaaagggtgaacctggatttggattacctggacctcaagggcaaccaggttctccagga
ttaaaaggatttcaaggaccaaaaggagattctggtttcccaggcatgccaggggctcca
ggaagagctggttttgatggatctcctggaccaaaaggtgactctggtcagaatggactt
cctggcccaccaggttcacctggacttcctggttctggtggtcaaggtcctcctggccct
ccaggacttcctggaccagccggtcctccaggattaacgggtatacctggtgacaagggt
agtcctggtcctccaggatttgacactcctggtccacaaggagatcgtggtaatcctggt
tttcctggagaacgtggatttccaggtcctccaggaccacctgggtttccaggccgtgat
ggagtactgggcattaaaggtggaaaaggtgacatgggagttatgggaccacctggacca
gctggaccacctggtaatccaggcagccctggttttccaggccccaaaggccttgatgga
tttcctggtcaaccaggtagcaatggtggtcctggagcaaaaggagaccagggagaacgt
ggtcttatgggtccaccaggatctgttgtaggaggtggtttaggaagcaaagggagtaaa
ggcgaacccggacaagatggtgcacctggctttaatggagagaaaggctttagtgggatg
ccagggtctcctggatcaccagggtcaagtggacttccaggatctccaggactgccagga
cctaaaggagattctggatttcctggacagtctgggctacctggttcccctggaccaaaa
gggaatatgggagagatgggacttccaggaccaagtggtgaaaagggtacacctgggcag
cctgggcgccctgggtcaccaggacctccaggattcagtggatcaaaaggtgaaaagggt
gaaccaggactttcaggcagcgggcaacctggcttgcctggtccaaagggagaaccagga
ccagcaggatttcccggtaaccctggaactaaaggtgaagcaggaagccctggactgcct
ggattgtcaggagtttcgggctctaaaggggatccaggtgctccaggattttcaggtgct
ccaggtctacaaggatctaaaggacttgatggaccttcaggaaaccctggtgccccaggc
cctcccggaccaaggggtgattctggccgccctgggcctccaggatctccaggtgaaaag
ggtcaaccaggccaagatggaattcctggtcctgctggcctaaaaggagaaccaggacta
ccaggttttgggacaccaggaacgcccggactacctgggggtccaggtgcaaagggtgag
ccaggattttctggtccccccggatctcctggatttcctggctctaaaggagacagtggt
tatcctggacgttcaggtagcccaggactaccaggacaaccaggtctccctggaatatcc
acaccaggccctaaaggaagtactggaccatcaggaccccccggccgcacaggtccacca
ggcccagaaggtcctcgcggcccccctggcaatggaggtttcaagggtgataaaggtaat
cctggcatccccggacaacctggattccctggaccaaaaggagactcaggaacatcagga
ctaccgggtgatcctggaagaccaggtctgaatggaatgaaaggagatcagggtgtacct
ggtgtcccaggcttcccaggtatgaaagggcccagtgggccacctggtttggcaggcttt
aaaggtgacacaggcagcccaggtcttcaaggttctccaggatcacctggtccaaagggc
gagatcaggactataccaggacctcctggtccacctgggcgcccaggaagcaatggacct
tctggaccaccaggaccacctggattaccaggttcactagggcctcctggtgattccggc
agagatgggctaccaggatttgagggacaggcaggacgtaaaggtgacagaggtctacca
ggtcagccaggttcaagaggaaaccaaggcccccctggtccagatggagtccaaggccct
ccaggtgctccgggctcaggatctgtagctcatggattcctcataacccgtcatagtcaa
gcgacagaatcaccagcatgtcctcagggtaccagtagaatatacgatggatattctctt
ctttatgtacaggggaacgaacgggcacatggccaagacttgggtaccgctggcagctgt
ctcaggcggtttagcacaatgcctttcatgttttgcaatatcaataatgtgtgcaatttt
gcatcaagaaatgattactcctactggctttccacgccagagccaatgccaatgaacatg
gagccactaaggggaagagacattcagccatttataagccgatgcaccgtttgtgaagct
cccgccatggtgattgccattcacagtcagaccattcagattccgccatgtccacaaggc
tggtcttcactatggattggatattctttcatgatgcatactagtgccggtgcagaaggt
tcaggacaagctttagcatcgcctggatcatgtttagaggaattccgttcagcacctttc
attgaatgtcatggtcgcggtacctgcaattactatgcaaactcatatagtttctggctg
gccaccgtggaaatgtctgaaatgtttagtaaacctcagtctgaaacactcaaagctggt
gacctgagaacacgcgtcagccgctgccaagtatgtatgaagaggacgtaa
DBGET
integrated database retrieval system
