Dendrobates tinctorius (dyeing poison frog): 141051770
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Entry
141051770 CDS
T11000
Symbol
SKIC2
Name
(RefSeq) superkiller complex protein 2
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Pathway
dtc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141051770 (SKIC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dtc03019
]
141051770 (SKIC2)
Enzymes [BR:
dtc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
141051770 (SKIC2)
Messenger RNA biogenesis [BR:
dtc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
141051770 (SKIC2)
mRNA degradation factors
3'-5' decay
Ski complex
141051770 (SKIC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
DEAD
MTR4_beta-barrel
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
ResIII
DUF3516
Motif
Other DBs
NCBI-GeneID:
141051770
NCBI-ProteinID:
XP_073404893
LinkDB
All DBs
Position
Unknown
AA seq
1248 aa
AA seq
DB search
MSKQDLSSVDPLDLPLSVLEVGIAGRLELITDTPNPKGSTFPLSTVPHGLPPYEVDLSFE
VIEKYLADPEWLSIHDFDRSRRCFPRSKDVASLYHMDISAPQTELSMKRNAATGELRGIN
EVTIGHSGLSAQNSLSLRRPPGPPSQSVKGSTSNFPFWPGGMDEPTLEQMKAAGDEEEAL
DFEKDLLTAPPGWKQGMSFKTPDGSRALGVLPFTSLLGSLEDFTLADSSEDEEEVKVKQK
DKRTKAESLLRSDSLEELGVEAVSTMAPPPPVSAPAESPQEQWAIPLNSHSPVDDFYKQI
PDLAFKHPFELDTFQKKAVQCLEDGSSVFIAAHTSAGKTVVAEYAIALSLKHMTRSIYTS
PIKALSNQKFRDFRITFRDVGLITGDVQLYTGASCLIMTTEILRSMLYNGSDVIRDLEWV
IFDEVHYINDAERGVVWEEVLIMLPDHVNIILLSATVPNTVEFADWIGRIKKKKIYVIST
SKRPVPLEHYLYTGNSQKTLNQFFLLQDATGTFQTKGYYAAVEAKKERSSKYSQTFGAKH
PHGGGAGHDKGTWLSLIQSLRQRDALPVVVFTFSRTRCEQNAGALTTVDLCTAPERSEIQ
TYYNKCLSRLRGGDRQLPQVLHMLDLLKRGIGIHHSGILPILKEVVEMLFSRGLVKILFA
TETFAMGVNMPARTVVFDSIRKHDGSNFRDLTPGEYIQMAGRAGRRGLDNTGMVIILCKS
DVPEMSDLHKMMMGKPTQLHSQFRLTYSMILNLLRVEALRVEDMMKRSFAEAHTQKDSKA
HEQRIKVLTKTLGDMGDVECSGDLADLYDYFVTVQELVYTRDLLQKKVVESINGMKCLSA
GRIIIIRTDYHPWVPGVILQVSSDATNKIYTTLVLCEKKHDGTMAPTPRAEKNNKMAPCP
DDLLMTKVFRPEGPCDYKLLKLRSSEILIITGKTLRVYADKVLDDVARSQTPRFRNDPPG
PAVSSVTQELARLADLPPGSLSALCPVNDLQLKELEVVEAVTRVKRLEGVLSGFISPNSP
RFTSQYLRLEQRSQVMDELDRLRFLTSEQSLSLLPEYQQRINVLRTLKYIDDGGAVQLKG
RVACEVCSHELLVTELVLDGALSPLNPEEIAALLSCLVFQHKTQCEPKLTDTLKEGVKKV
RELAERLALIQRECGLKESVEDFVAQYKFGLTEVVYEWARGMPFSEIMTLTDIQEGLIVR
CVQRLDEACRDVRSAARLVGDATLCAKMEAASQLIKRDIVFAASLYTQ
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcaagatctctcctctgtggatcctctggatctcccactttctgtactggaa
gtcggaatcgctgggagattagagctgatcactgacacccccaaccctaaaggctccacc
tttcctctatccacggtccctcatgggttacccccatatgaagtcgatctctcctttgaa
gtgattgagaagtatctcgctgacccagaatggctgtctatccatgactttgatagaagc
cggaggtgtttccctcgaagtaaggatgtcgcatccctgtatcatatggatatcagtgcc
cctcagacggagctcagcatgaaacgaaatgcagcgactggggaacttcgggggatcaat
gaggtcactatcgggcacagcggcctctctgcccagaattctctctccctccgccgcccc
ccggggcctccgtcacagtcagtgaagggcagcacttctaacttccctttctggcccggg
ggaatggatgagcccaccctagagcagatgaaggccgctggagatgaggaagaggcgctg
gactttgagaaagatctactgactgctccccccgggtggaaacagggaatgagcttcaag
acgccagacgggtcccgggccctgggggtcctacccttcaccagcctgctggggtctctg
gaagatttcacactggcagactccagtgaggatgaagaagaagtaaaagtcaaacagaag
gataaaaggactaaagctgaaagtctcctgaggagcgatagcctggaggagctgggagtg
gaggcggtttctactatggcgcctccaccaccagtctcggctccagccgaatccccccag
gagcagtgggccatccccctgaacagtcattcaccagtggatgatttctataagcagatc
ccggacctggcctttaagcatccatttgagctggatacgtttcagaagaaggctgtccag
tgcctggaggacggctcctctgtcttcatcgctgctcacacgtctgccgggaagacggtg
gtagctgaatacgccatagcattgtctctgaagcacatgaccaggtccatatacacctct
ccaatcaaggctttgtccaatcagaaatttagagatttcaggatcaccttcagagacgtt
ggtctgatcacaggggatgtccagctgtacaccggtgcctcgtgtcttatcatgaccacg
gagatcttaaggtcaatgctgtacaacggctctgatgtcatccgcgacttggagtgggtc
atcttcgatgaggttcattacattaatgacgcagagcgcggtgttgtatgggaagaggtc
cttataatgctcccggaccacgtaaacatcattctgctgagcgccaccgtacccaacacc
gtggagtttgcagattggatcgggagaattaagaagaagaagatttacgtcatcagtaca
tcaaagaggccggtccctctggagcattacctgtacacgggaaatagtcagaaaacactt
aaccagttttttctgctgcaagatgcaactgggaccttccaaaccaagggatactacgcc
gcagttgaagcaaagaaggagcgttcctcgaagtactcacaaacgtttggggccaaacac
ccacatggaggaggcgccggacatgataagggcacctggttgtcgctcatccagtccctg
cgacagagggacgctctgcccgtcgtggtgttcacattctcccgtacccgatgcgagcag
aacgccggagcgctgaccaccgtagacttgtgtacggcgcctgaacgaagcgaaatccag
acgtactacaacaaatgcctgagccggctgcgtgggggcgaccgccagctcccccaggtg
ctgcatatgctggacctcttgaagagggggatcgggatccatcacagtgggatcctgccc
attctgaaggaagtggtggagatgttatttagccgtggactcgtcaagatcctgtttgcc
acagagacatttgctatgggggttaacatgccggcccgcaccgtggtgtttgactccatc
agaaaacatgatggatccaacttcagagacctgactccgggagagtatatacagatggct
gggcgcgcaggacggcgagggctggacaacaccggaatggtgatcatactgtgcaaatcc
gacgtgcccgagatgagcgatctgcacaagatgatgatggggaagcccacccagctgcac
tcccagttccgtcttacatactccatgatcctgaatctccttcgtgtcgaggctttgaga
gtggaggacatgatgaagaggagttttgctgaagcccacacccaaaaagatagcaaggcc
catgaacaacgcattaaggtcctgaccaagactctgggtgacatgggggacgtcgagtgc
tccggggacctggcagatctttatgactattttgtgacggtgcaagaactcgtctacacg
agggatctgctgcagaaaaaggtggtcgaatccatcaacggcatgaagtgtctaagcgca
ggacgcatcatcatcatccgaacagactatcacccctgggtgcccggagtcatcttgcag
gtgtcatcagatgccaccaataagatctacactacactggtgctctgtgagaagaaacat
gatggcacaatggcccctacgccacgagcagagaagaacaacaagatggcaccatgtcct
gatgacctgttaatgaccaaagtgttccgccccgaggggccatgtgactacaagctcctg
aagctccgctcctccgaaattcttataataactgggaagacattaagggtctatgccgat
aaagttctggacgatgtcgctaggagccagaccccgcgcttcagaaatgatcctccgggc
cccgcagtatccagtgtgacccaggagctggcacggctggcggacctgccacctggatcg
ttgtcagcgctgtgccccgtgaatgatctacagctgaaggagctggaggtagtggaggcc
gtcaccagggtcaagagactggaaggagtcttgagtggattcatctctccgaacagtccc
cgttttacttcccagtatctccgtctggagcagagatcacaggttatggatgagttggat
cgtctccgcttcctgacgtctgagcagtcattgagtttgttgcccgagtaccagcaaaga
atcaatgtcctgcgcaccctgaagtacatagatgatggtggcgcagtgcagctgaagggc
cgcgtggcttgtgaggtttgcagtcatgaactgttggttacggagctggtgttggatgga
gctctgtcgccccttaaccctgaggagattgctgccctgctgtcctgcctcgtcttccag
cataaaacacagtgtgagccaaaacttacagacacgttaaaggaaggtgtcaagaaagtg
cgggagttggcagaacgtttggctttgattcagcgggagtgcggtctgaaggagtcggtg
gaagattttgttgcacagtacaagtttggtctgacggaggtggtttatgaatgggctcgt
ggcatgcccttctccgagattatgacactcacagatatccaggagggcctcattgtgcgg
tgtgtccagcgtctggatgaagcttgccgggacgtgcgctccgctgctcgtctggtcgga
gacgccacgctctgcgcaaaaatggaagccgcttcacagcttatcaagagggatatagtc
tttgctgccagcctgtacacacagtga
DBGET
integrated database retrieval system
