Dendrobates tinctorius (dyeing poison frog): 141057909
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Entry
141057909 CDS
T11000
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Pathway
dtc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
141057909 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dtc03400
]
141057909 (MSH2)
DNA repair and recombination proteins [BR:
dtc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
141057909 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
141057909
NCBI-ProteinID:
XP_073410108
LinkDB
All DBs
Position
Unknown
AA seq
932 aa
AA seq
DB search
MAVQPKEKLCMDSGAESGFLSFYHAMPDKPDTTVRVFDRNDYYTVHGGDALFAAKEVFKT
SGVIKYLGSGSKKLESVVLSKMNFESFVRDLLLVRQYRVEVYKNKSGGKASKDNEWHLAF
KASPGNLTQFEEILFGNNDMSSAVGVVGVRLVSSEGQRLVGVGFVDSTFRKLGVCEFPDN
DQFSNLEALLVQIGPKECVMPGGDAGGDLGKVRQIVQRGGILLTDRKKAEFTTKDCVQDL
NRLLKAKKGEQITSAALPEMDKQVAMSALSAVMKYLELLSDESNFGQFQMTSFDLNQYMR
LDNAAVGALNLFPGSAEDTTGTQSLSGLMNKCKTAQGQRLVNQWIKQPLMDKNRIEERLN
LVEAFATDAELRQCLQEDLLRRFPDLNRLAKKFQRQNANLQDCYRLYQAVNQLPSVIQVL
EKYQGAHQMLLLAVFVTPITDITSDFSKFQEMIETTMDMEQVENHEFLVKPSFDPNLTEL
REKMDELEKNMQSTLNSAARELGLDPGKGIKLESNAQLGHYFRVTCKEEKALRNNKKFST
IDIQKNGVRFTNSKLSSYNEEYIRHREEYEEAQNAIVKEIISISSGYVDPMQTMNDVIAH
LDAIVSFAHVSNGAPVPYVRPVILEKGRGRIVLKAARHPCVEMQDDVAFIPNDITFEKEK
QMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEVSIVDCILARVGAGDSQLKG
VSTFMAEMLETASILRSATENSLIIIDELGRGTSTYDGFGLAWAISEYISTKIQAFCMFA
THFHELTALADQVPTVNNLHVTALTTDETLTMLYRIQTGVCDQSFGIHVAELANFPKHVI
ENAKAKALELEEFQFIGAGGDHEDEPVCKKRHIEKQEGEKIIQDFLSKVKTLPLTVMSED
DLKLRLNQLKADVLAKNNSFVNEVISRAKTVP
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgcagccgaaggagaagctgtgcatggacagcggggcggagagcggcttcctc
agcttctatcacgccatgccggacaagccggacaccacggtgcgggtgtttgacaggaac
gactactacacggtgcacggcggagacgctctgtttgccgccaaggaagtgttcaagacc
agtggtgtcatcaagtatctgggatcaggcagtaagaagttggagagcgtggtgctcagt
aagatgaactttgaatctttcgtccgggatcttcttctcgttcgtcagtatcgtgtagaa
gtttataaaaacaagtccggaggcaaagcctccaaagacaacgagtggcacttggctttt
aaggcgtctccaggaaacctgacccagtttgaggagattctgtttgggaacaatgatatg
tcctctgccgtcggagttgttggtgtacggttggtcagctccgagggacagagattggtt
ggagttggttttgtagattccactttcaggaagcttggagtgtgtgaatttccagataat
gatcagttttctaatctagaagctttactagttcagatcggaccaaaggagtgtgtgatg
ccgggaggagatgctggcggagacttggggaaagtaagacagattgttcagcgaggtggg
attctcctcactgataggaaaaaggctgaatttactaccaaggattgcgtacaagatctt
aaccggcttcttaaagcaaaaaaaggagaacagatcactagcgccgcattaccagagatg
gataagcaggttgcaatgtcagccctgtctgcagtcatgaagtatctggagctattatcg
gatgagtctaatttcggtcagttccagatgaccagctttgacctgaatcaatacatgaga
ttggataatgctgctgttggtgcattgaacctcttccctggttcagcagaagacactact
ggaacgcaatcactgtctggattaatgaataagtgtaaaactgctcagggacaaaggttg
gtgaaccagtggattaaacaacccctaatggacaagaacaggatcgaagagaggttgaac
ctggtggaagcctttgcgaccgatgctgaactcagacagtgtctacaggaagatttactc
cgtcgctttccagatcttaaccggctggccaagaagttccaaagacagaatgcaaatctg
caggattgttaccggctgtatcaggcagtgaaccagctgcccagcgtcatccaggtcttg
gagaaatatcaaggtgctcaccagatgctgctcctggctgtgttcgtcactcccatcaca
gatataacttcagacttttctaaattccaagagatgattgaaaccaccatggacatggag
caggtggaaaatcatgaatttctcgtgaaaccttcttttgatcccaacttgaccgaatta
agagaaaagatggatgagcttgagaaaaacatgcagtctactcttaacagtgcagctaga
gagcttggtctggatcctggaaaaggcataaaattagaatcgaatgcgcagctcggtcac
tatttccgggtaacctgcaaggaggaaaaggctctgaggaacaacaagaagttctcgact
attgatattcagaagaatggagtgaggttcacaaacagcaaattgagctcttacaacgag
gagtacattagacacagggaagaatatgaggaagctcaaaatgcgattgtgaaagaaatc
attagcatctcctctggatacgtagatccaatgcagacgatgaacgatgtaattgctcat
ttggatgcgattgtcagctttgctcacgtttctaatggagctccagtgccatatgttcgc
ccagtcatcttggagaagggacggggaagaattgtgctgaaagctgccagacacccatgt
gttgaaatgcaggatgatgtggcgttcatccccaatgatataacgtttgagaaggagaag
cagatgttccatattatcactggtccaaacatgggtggtaagtccacatatattcgccag
accggagtgatcgttcttatggctcagattggctgctttgtaccttgtgactctgctgaa
gtgagcatagtggactgcattcttgccagagtgggtgccggtgacagtcaacttaaagga
gtttctacattcatggctgagatgctggaaactgcgtctatcctccgatcagctacagag
aactctttgatcatcatcgatgaactgggcagagggacctccacctacgatggctttgga
ctagcatgggctatctcagagtacatctctacaaaaatacaggcattttgcatgtttgcc
actcacttccatgaattgacggctctggctgaccaagtgcctacagtgaacaatctacac
gttacggctctaacgacagatgaaacgcttaccatgctctatcggatccaaacaggtgtt
tgtgaccagagctttgggatacatgtggcggagctggctaacttcccaaagcatgtgatt
gagaatgccaaagcaaaggccttggagttagaagaattccagttcatcggagccggaggg
gaccatgaggatgaaccagtctgtaagaaacgtcacatagagaaacaggaaggcgagaag
atcatccaggacttcctttccaaagtcaaaactctgccgctgaccgtaatgtccgaggac
gacctgaaactcaggctcaatcagctaaaggccgatgttctggctaagaataacagtttt
gtaaatgaagttatttcccgcgcaaagacagtgccctga
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