Dendrobates tinctorius (dyeing poison frog): 141057911
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Entry
141057911 CDS
T11000
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Pathway
dtc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
141057911 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dtc03400
]
141057911 (MSH6)
DNA repair and recombination proteins [BR:
dtc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
141057911 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
PWWP
MutS_II
MUM1-like_PWWP
AAA_29
Motif
Other DBs
NCBI-GeneID:
141057911
NCBI-ProteinID:
XP_073410112
LinkDB
All DBs
Position
Unknown
AA seq
1349 aa
AA seq
DB search
MSKQSTLFSFFTKSPPASTSKVKRSGDSTSPTEADVPAIAGHKSNTSPKESAGAPKHEGK
KTPRAATPSAVCDFVPGDLVWAKMPGYPWWPSLVYNHPEQETHLRGKGKSLHVHVQFFDE
PPTRGWVGAKYMKNYSGSSARETQKGGLFFSTRPEIRRAMKMADDAMTADKEKRLSLAVC
AELSDSEEEMEVEESSVSDDPIPEPNNGRPMRQAKKNGKAKRRRIMVELDSDEEASDDEF
KPDTKDSASSDEGSSGVDEANVSAPDSATEEDSPVKVPIKRKRESVSKPPVKLQNDLPET
PKRAVNVSAEAKLKLSSFSAPESFESQANSTGAAGVSTWEHEKFEWLQDGRRKDSRRRRK
TDDDYDPGTLYVPDDFLNKCTPGMRKWWQLKSQHFDTVIFYKVGKFYELYHMDAIIGVNE
LGLTFMKGTWAHSGFPEIAFGRFSDVLVQKGYKAARVEQTETPDMMEARCKSMSHPTKFD
KVVRREICRIITKGTQTYSVLDGSPSESHNKYLLCLKEKQNESSAQQRIYGVCFVDTSVG
KFHIGQFYDDRHCSRFRTLVAHYPPVQILFEKCNPSLDTKKVLKSCLSTSIQEGLNSSSQ
FWDAAKTLKVLAEEGYFVKEGKEERENCTLPPVLKDMTSDSDSLALTPGDNHELALSALG
ACIFYLKKCLIDQELLSMANFEEYVPVDFDIERAQTPTSFFAKTSQRMVLDGVTLTNLEI
LQNGTNGSTEGTLLEKLDTCFTPFGKRLLKQWLCAPLCNPFSINDRLNAVEDLMAIPGKV
LEVGELLKKLPDLERLLSKIHSIGSPLKSQNHPDSRAVMYEETTYSKKKIADFLSALEGF
KVMCEVVVTMEDVVDDFKSNILKQVLSLKDKNSKGRFPDLSAELKRWDTSFDHEKAKKTG
VITPKAGFDPDYDEALRDLKAAEQNLADYLEKQRKRLGCKSIVYWGTAKNRYQMEIPESI
TERNLPESYELKSTKKGFKRYWTKAIENMFGDLVNAEERRDAALKDCMRRLFYNFDKNYK
EWQTAVECFAVLDVLICLAQYSRGGDGPVSRPDILLPDDTAPFLELRGSRHPCITKTFFG
DYFIPNDIIIGCKDEEEDVSSAHCVLVTGPNMGGKSTLLRQAGLMVVIAQLGCYVPAEVC
KLTPVDRVFTRLGASDRIMAGESTFFVELSETSSILQHATEHSLVLLDELGRGTATFDGT
AIASAVVKELSERINVRTLFSTHYHSLVEDYSHTAAVRLGHMACMVENECEDPSQETITF
LYKFIKGACPKSYGFNAARLANIPDEIIQTGHKKAREFESVILSVKIFRHPDKTYRSSEM
GLPTVTGTSIPPQTGRGSDSAQASDRVET
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcagagcaccttgttcagtttcttcaccaagtctcccccggccagcaccagc
aaggtgaagaggagcggggactccacgtcccccaccgaggctgacgtgcccgccattgcc
ggacacaagtccaatacgtcacctaaagagtcagcgggggctcccaaacatgaagggaag
aagaccccccgagctgccacacccagtgcggtttgcgattttgtacccggagatcttgtt
tgggccaagatgccaggttacccatggtggccgtccttggtgtacaaccatcccgagcaa
gagacgcacctcagaggaaagggaaagtccctccatgttcatgtacagtttttcgatgaa
cctccgaccagaggatgggtgggagcaaaatatatgaagaattattcaggttcatcagcc
agagaaacacaaaaaggaggcctgtttttcagcaccagacctgagataagaagagcaatg
aaaatggcagatgacgcaatgacagctgataaagagaaaaggctgtctctggcggtgtgt
gcagaactgtcagattcagaggaggagatggaggtagaagaaagttctgtaagtgacgat
ccgattcctgagccaaataacggcaggccgatgcgtcaggctaaaaaaaatgggaaagca
aagaggaggagaattatggttgagttggacagtgatgaggaagcctctgacgacgagttc
aagccggacacgaaggactctgcaagcagtgatgagggcagcagcggagtggacgaggct
aacgtgtctgcaccagattcggcaacagaagaggacagcccagtcaaggtccctatcaag
cgcaagagagagagtgtgtccaagcctcctgttaaattgcaaaatgatctgccagaaact
ccaaaaagagcagtcaatgtgtctgcagaagccaagttgaagctgtcatcgttttctgcc
cctgagtcctttgaatcgcaggcaaactccacaggtgctgctggggtttctacatgggag
catgaaaagtttgagtggcttcaagacggccgaaggaaagactccagacgaagacgaaaa
actgatgacgattatgatcctggcacgctgtatgttcctgatgactttcttaataaatgc
actccaggcatgagaaaatggtggcagctgaaatctcaacactttgatacggtcatattt
tataaggttgggaagttttatgaactttaccacatggatgcgattatcggggtgaatgag
ttggggctgacgttcatgaagggcacatgggctcactctggattccctgagattgcgttt
ggacgcttctcagatgttctagttcagaagggatataaagctgctcgggtagagcagaca
gaaaccccagacatgatggaagcacgatgcaaatccatgtctcaccctacaaagtttgat
aaggttgtgagaagagaaatctgcaggattattaccaaaggcactcagacctacagcgtg
ttagatgggagtccctcagagagccacaacaaatacctgctatgtctgaaggagaagcag
aacgagtcgtctgctcagcagagaatatatggggtctgctttgtggacacctcggtaggc
aaatttcacattggccaattttatgacgaccgccactgttcgagatttaggaccttggtc
gcccattaccccccagtacagattttgtttgagaagtgtaatccgtctctggatactaaa
aaagttcttaaaagctgcctctcaacttcaatccaggaggggttaaattcttcctctcag
ttctgggatgctgcaaaaacactaaaggttttggctgaagaagggtattttgtaaaagaa
ggcaaggaagagcgcgaaaactgcacattgccgccagttctaaaagacatgacgtctgac
agtgactctttagcacttacccctggtgacaatcatgaacttgccctttctgcactcggg
gcttgcattttttatcttaagaaatgtctcattgatcaagaactactctcgatggcaaac
tttgaagagtacgtccctgttgacttcgacatcgaaagagcccaaaccccaaccagcttc
tttgctaaaacaagccagcgaatggttcttgatggtgtcacactaacaaacttggaaatt
ctccagaatgggaccaatgggtccacagaagggacactcctggagaaattagacacctgc
ttcactccttttggcaagcgtcttttaaaacagtggctctgtgctccgctgtgcaatccg
ttctctatcaatgatcggcttaatgcggttgaagatctcatggcaattccggggaaggtg
ttggaggttggagaactgctgaaaaaacttccagatcttgaaagacttttgagcaagatt
catagcattggctctccgctcaaaagccaaaaccatccagacagcagagcagtcatgtac
gaggagaccacctacagcaagaagaagatagcagatttcctttctgctctggaaggcttt
aaggtgatgtgtgaagttgtagtgacaatggaagatgtcgttgatgatttcaagtccaat
attctcaaacaggttctcagtcttaaggataaaaattccaaaggacgctttccggatcta
tccgctgaattaaaacgctgggatacttcatttgatcacgagaaagctaaaaaaactggt
gtgatcactcctaaagctggcttcgatccagactatgatgaagccctgagagaccttaag
gcagcagagcagaatctggctgattatttggaaaagcagcggaaaagactcgggtgcaaa
agtattgtgtattgggggactgcaaagaaccgttaccaaatggagattccggagagcatc
acagagcgcaacttaccagagtcatatgaattaaagtccacaaaaaagggctttaaacgg
tattggactaaagccatagaaaatatgtttggcgacctagtaaatgcagaagagcgcaga
gatgcagccctcaaagactgtatgaggaggctgttttataactttgataagaattacaag
gagtggcagacggcggtggagtgctttgccgtgttggatgtccttatttgcttggcgcag
tacagccgaggtggtgatggaccggtttccaggcctgacatcctattacctgatgatact
gcaccatttttggagctccgtggatctcgtcacccttgcattacgaaaaccttctttgga
gattacttcataccaaatgatattataattggttgcaaggacgaggaagaagacgttagt
agcgctcactgtgtgctggtcacaggcccaaacatgggtggcaagtcgactctgctcaga
caggccggtctcatggttgttatagcacagctggggtgttacgtgcctgcagaagtctgt
aagctgacccctgtggacagagtttttaccaggctgggggcatccgacagaatcatggca
ggtgaaagcacttttttcgtggaattgagtgaaacgtcaagtattctccagcatgcgact
gagcattccctggtgctcctggatgaacttggcaggggcacggctacatttgatgggacc
gctatagccagtgccgttgttaaggagctctctgaaaggattaatgttcgcactttgttt
tctacacactatcattcgttagtggaggattactctcatactgcggccgtacgtctgggg
catatggcttgtatggttgaaaatgaatgtgaggatcctagccaggaaacaatcactttt
ctttataagtttatcaagggagcttgccctaaaagctatggattcaatgcagcaagactc
gccaacatccccgacgagattattcagactggtcataagaaggcgcgagagtttgaaagt
gtaatactgtccgtgaaaatattcagacacccggataaaacctaccgcagctcagagatg
ggacttccaaccgtgacgggaacaagtatcccacctcagacaggaaggggatctgactct
gcgcaagcatcggacagggtagaaacctga
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