Dendrobates tinctorius (dyeing poison frog): 141058305
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Entry
141058305 CDS
T11000
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
dtc
Dendrobates tinctorius (dyeing poison frog)
Pathway
dtc04120
Ubiquitin mediated proteolysis
dtc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
141058305 (SYVN1)
04120 Ubiquitin mediated proteolysis
141058305 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dtc04121
]
141058305 (SYVN1)
Enzymes [BR:
dtc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141058305 (SYVN1)
Ubiquitin system [BR:
dtc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141058305 (SYVN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf_RING_Vps8_fungal
zf-ANAPC11
zf-RING_Vps41
zf-RING-like
FAR1_N
zf-HC5HC2H
zf-C3H2C3
Endonuclease_7
zf-Nse
Motif
Other DBs
NCBI-GeneID:
141058305
NCBI-ProteinID:
XP_073410607
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MCSHGSTVSGKLSGAQKRPDNSVFLDFNGNDGKSTIYSLNLLQTEHRFRTQQRKSPMFQG
PAPPLTAKMRTAMMTGASLALTAAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVL
VFLLGKFMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFL
KCFHWLAEDRVDFMERSPNISWLFHFRILALMLLLGVLDVLFVSHAYHSLVSRGASVQLV
FGFEYAILMTMILTVFIKYVLHSVDLQSENPWDNKAVYMLYTELLTGFIKVLLYMAFMTI
MVKVHTFPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCII
CREEMVTGAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQAQAPADQPDPAQ
QPHAAPAQQTPVIPPPPNFPPGMIPPFPPGMFPLWPPMGPFPPVPGLPGSNAAEEANAGT
SSASAPRPGDTLNTAGADSSAGTSLPGFPFPPPFLGMPMFPPFGLPPMPMPPAGFAGMTD
EELRAMEGHERQNLEARLQCLQNIHTLLDAAMLQINQYLTVLATIGPPRPPMPSPQSPVV
SSDIVSSSQSEETPTSEAPSDVPEASQSVQVESTSEEITNDSEAGTSTEEPDTAELRRRR
LQKLETGTSESH
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagccacgggtctacagtctcaggaaagctgtcaggagcacagaaaagacccgac
aacagtgtttttctagacttcaatggaaatgatggcaaatccacaatttacagcctaaac
ctattacagactgagcataggttccgaacccagcagcggaaatccccaatgttccagggt
cctgcccctcccttgaccgccaagatgaggacagccatgatgacaggtgccagcttggct
cttacggctgcggtggtggctcacgcttattacctcaagcaccaattctatccaacagtt
gtgtatttgaccaagtcaagtcccagtatggctgtgctctatatacaagcgtttgtcctg
gtcttcctcctaggcaagtttatgggcaaagtgttttttggtcagctgcgagcagctgag
atggagcacctcctggagcgctcctggtacgccgtcaccgaaacgtgtctggctttcacg
gtgttcagggatgacttcagcccgcgatttgtggccctcttcacccttctgctgtttctg
aaatgtttccactggttggcggaggatcgtgtggattttatggagcgcagcccaaacatt
tcctggttattccatttccggattctcgcactgatgctcctactcggggtgctcgatgtt
ctctttgtatctcatgcttatcacagtttggtctccagaggagcctcggtgcagctggta
tttggatttgagtatgccatactgatgacgatgatcctcacagtcttcataaagtatgtc
ctgcactctgtggaccttcagagtgagaatccctgggacaataaagcagtgtacatgtta
tacaccgaactcctgactggctttataaaggttttgctctatatggctttcatgaccatc
atggttaaagtccacacgtttccactttttgcaattcgaccaatgtatttggcaatgagg
cagtttaagaaggcagtcactgacgccatcatgtcaaggagagcgatccgcaacatgaac
accttgtatccagatgccacaccagaggagctgcaggccatggacaatgtgtgcatcatc
tgcagagaggagatggtgactggagccaagagacttccctgcaaccacatcttccacacc
agttgcctgcgttcttggttccaaaggcagcagacttgtcccacatgtcgaatggatgtt
ctcagagcttccctgcccacgcaagctcaagcacctgcagaccagccggaccctgcccag
cagccgcacgcagctcctgcacaacagactcccgttatccctcctccacccaacttccct
ccagggatgattccaccttttcctcctggaatgtttccactctggcccccaatgggtcct
tttccgccagtccctggcttacctggatccaatgccgcggaagaagccaatgctggaact
tccagtgcatccgctcctaggcctggagatacattgaacactgctggcgctgattcatca
gctgggacatctctgccaggctttcctttcccacctccatttttaggaatgccaatgttt
cctccatttggtttgccccccatgccaatgcctcctgccggctttgctggtatgacagac
gaggagttgagggcaatggaaggtcacgagaggcagaatctagaagccaggcttcagtgt
cttcaaaatatccatactcttctagatgctgccatgttacagataaaccaatatcttaca
gtattggcaactatcgggcctcctcgtcctcccatgccctctccacagtctccagtagtc
tcctcagatatagtttcatccagtcagtcggaagaaacccccacttctgaagccccctca
gatgtccccgaagcctcgcaatcagttcaagtggaatccaccagtgaagagattaccaac
gattctgaagctggcacatcaacagaagaaccagatactgcagagttacggagacgtcga
cttcagaagctggaaacgggcacctctgaatctcactga
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integrated database retrieval system
