Dendrobates tinctorius (dyeing poison frog): 141058392
Help
Entry
141058392 CDS
T11000
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Pathway
dtc03008
Ribosome biogenesis in eukaryotes
dtc03013
Nucleocytoplasmic transport
dtc03015
mRNA surveillance pathway
dtc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141058392 (NXF1)
03015 mRNA surveillance pathway
141058392 (NXF1)
03008 Ribosome biogenesis in eukaryotes
141058392 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
141058392 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dtc03019
]
141058392 (NXF1)
03009 Ribosome biogenesis [BR:
dtc03009
]
141058392 (NXF1)
Messenger RNA biogenesis [BR:
dtc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141058392 (NXF1)
mRNA cycle factors
Stress granule specific factors
141058392 (NXF1)
Ribosome biogenesis [BR:
dtc03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
141058392 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
UBA_8
LRR_8
LRR_4
UBA_4
Motif
Other DBs
NCBI-GeneID:
141058392
NCBI-ProteinID:
XP_073410749
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MADGGRSYIDHDDRFSRGHFMKKRKGRGPFRAKMYSEGPPKYQNRGNYPPNPRSRLDDDG
DIAMSDAHETVRSRFNPYSRGGRKRDDRQVRDRGGMHGNTSRDTSHYQRNDERDEKSWFK
ITIPHGKKYEKSWLLGLLQNACSLPFTPVGYYCDHSRAHFYVEDSAVAKALKQISRTFTD
RENFKVTILANRCPTPDVPKGMTEEEIAHLKTCMQKRYDGAQQSLNMRSIRTDPDLVEKK
IDMILNRKSCMSAMLQIIEENVPELLSLDLGNNKLYKGDNLSEIHLKAPNLKILNLSDNL
LKSEKDLDNIKGLKLEMLWLEGNPLCRIFKNQTLYISAMRERFPKLLQLDGQDLPPPITF
DVETPTTLPPSKGSYLAGDDIKALILRFLQQYYACYDSEDRQGLLNVYHDEACCSLSIPS
QTGQNPSRSSLGDYFNYSRNIKRLRDPTMRFKLLKYKRLNVVSFLNELPRTQHDLNSFVV
DVTAQSNTLLSFVVNGVFKVEGQSNDPVRAFTRVFIAVPGSDGGLLLVNDEQFIRNATTE
EIRKAFATPAPTPSSSPVSVLAPVPQDLVQAFSLFSSMNSEWSQKCLQDNGWDFEQAAQI
FMKLKAEGKIPEIAFIN
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggtggccggtcctatattgaccatgatgaccggtttagcagaggtcacttc
atgaagaagaggaaaggacgtggcccttttcgggccaaaatgtacagcgaaggtcctccg
aagtatcagaatcgtggtaattacccaccaaatcctcgctccagattggatgatgatgga
gatattgctatgagtgacgcccatgaaactgtccgctcaagattcaatccttacagtcgt
ggagggagaaaaagggatgacagacaagtaagagacagaggaggcatgcatgggaacact
tctagggacacttcccattatcaaagaaatgatgaaagagatgaaaaaagctggttcaag
atcacgattcctcatgggaaaaaatatgagaagagttggttactagggctcttacaaaat
gcctgctccttaccgttcactcctgtagggtattattgtgatcattcccgggctcacttc
tatgtggaagattctgcagttgcaaaagcattaaaacagatatcgcggacttttacagac
cgagaaaacttcaaggttaccattcttgcaaatcgatgtccgaccccagatgtgccaaag
ggcatgacagaagaagaaattgcacatttaaagacctgtatgcagaaacgatatgatgga
gctcaacaatctcttaacatgaggtccatacgtactgatccagatttagttgaaaagaag
atagacatgatactgaaccggaagtcttgtatgagtgctatgctgcaaattatagaagag
aatgtaccggagctgctgtctttggaccttggtaacaacaaactctataaaggtgacaat
ttgtcagaaatacatcttaaagctcccaatttgaagattcttaacttgtctgataacttg
ttgaagtcagaaaaggatctggataatattaaaggacttaaactggaaatgctctggcta
gaagggaatccgctgtgcagaattttcaaaaaccaaactttatacatcagtgccatgcga
gaacgctttcctaaactcctgcagctggatggacaagaccttcctccaccgatcacattt
gatgtagagacccccacgacgcttccgccttccaagggcagttatcttgcaggagatgat
attaaagcactgattttacgatttcttcaacaatattatgcatgttacgatagcgaagat
cgtcaaggccttcttaatgtgtaccatgatgaagcttgctgttcgctcagcatccctagt
cagacaggacagaatccctccaggagtagtcttggggactatttcaactatagcagaaat
ataaaaagattacgtgatccaacaatgcgctttaaactgctgaaatacaagcgccttaat
gttgtcagctttctgaacgagctccctcgtacgcagcatgaccttaattcttttgtagta
gacgtcactgcccagtctaacacactactgtcctttgttgtgaacggtgtatttaaagtt
gaggggcagtcaaatgaccctgtgcgtgctttcactcgggtgttcatcgctgtgccaggc
tctgatggagggctccttttagtgaatgacgaacagttcataaggaatgccacgacagag
gagattcggaaagcctttgccactccagctcctaccccttccagcagcccagtatctgtc
cttgcaccagtgccgcaagatttggtgcaagcattctcactgttttcttcaatgaattct
gaatggtctcaaaagtgtcttcaggacaatggttgggacttcgaacaggcagctcagatt
tttatgaaactcaaggcggagggtaaaatcccagaaattgcgttcattaactga
DBGET
integrated database retrieval system
