Dendrobates tinctorius (dyeing poison frog): 141060544
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Entry
141060544 CDS
T11000
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Pathway
dtc04382
Cornified envelope formation
dtc04510
Focal adhesion
dtc04512
ECM-receptor interaction
dtc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141060544 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141060544 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
141060544 (COL4A1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
141060544 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dtc04147
]
141060544 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
dtc00536
]
141060544 (COL4A1)
Exosome [BR:
dtc04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
141060544 (COL4A1)
Glycosaminoglycan binding proteins [BR:
dtc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
141060544 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
141060544
NCBI-ProteinID:
XP_073412927
LinkDB
All DBs
Position
Unknown
AA seq
1674 aa
AA seq
DB search
MPGRWTTGCKLLALLCLLQELISCYEAAGCNGCATSKCDCSGVKGEKGERGFPGLHGVIG
FPGLQGPEGPPGPFGQKGDTGEPGLPGTKGNRGPPGSAGFPGNPGLPGIPGQDGPPGPPG
IPGCNGTKGEIGPLGPPGLPGLIGYPGPPGLPGIKGDPGDVIGMQGLMIKGEKGLPGING
LPGTPGLPGFEGPVGPPGPPGRTGAPGQPGPPGPKGQMGLGFHGPPGEKGEPGPPGPPGP
QGHASAENSSVWYREKGEKGMQGDKGDQGNRGDPGLSIKGEKGEPGKPGPRGKPGKDGEK
GQRGHDGVPGRPGFDGIRGQDGERGEKGDSGPPGPPGLVIHDGQHTVTGEKGDTGPPGYP
GSKGEKGAKGTNGIPGSPGQPGISIPGPNGAPGLIGERGEKGEPGIPGLSLPGQKGSEGL
RGPPGFPGPPGAIDPTQECIPGRPGEPGSPGTPGEQGFTGERGQKGDKGDACSTCDTLPS
SLPGPPGPQGPPGEPGISGQPGNKGDRGEPGYDGPPGSPGSQGIPGLMGRPGAKGSPGEV
YFEPKLKGDKGDAGLPGLTGTPGIEGRPGRDGQPGQPGPKGVSGTIGAKGERGPPGDSGF
PGIPGQRGLQGPPGIGPAGQVGERGEPGVPGFGGLPGNPGSKGEPGKLSVVTGPPGPMGG
AGSPGFPGEQGDKGPQGFPGRPGFPGEKGEPGLEGKGTPGSPGEKGHQGMEGTRGIDGSP
GQPGREGLRGEPGVAGIKGEPGLGLPGPKGSHGPPGPPGATGEKGSTGLTGVPGEQGLPG
VPGYSGAKGDTGPAGAPGMRGNPGVPGFGPLGEPGPQGAPGSSGVPGEKGAKGERGYPGF
PGTDMPGPKGDKGTSGIPGIMGMPGVPGSQGPPGNDGSPGLQGQKGDMGFMGVPGIRGQT
GTPGNPGLPGEKGDLGPTGFRGETGTPGTKGEKGEHGLQGPPGTLPPMEHMKGDKGDQGI
TGQIGLEGEKGLHGDLGSTGMPGKDGEQGMPGKQGPKGEKGFQGTPGAPGMPGLKGSVGE
MGLPGTTGPKGEHGIHGTPGLPGVTGIKGDKGLKGEQGLPGIGIPGPPGTKGDAGTDGLQ
GVTGERGDKGDIGVPGMPGLPGPKGSTGSAGFPGNPGMPGEKGEKGFSGQDGFPGTKGLQ
GERGTEGPSGSIGEKGEPGYDGIPGTPGEKGEPGIPGRGVPGYPGERGEKGFKGDAGFPG
SPGAPGFPGIKGDQGFPGNQGVRGQQGVPGLPGMAMDGPKGDKGQPGPSGFPGVPGPVGV
AGFPGQEGAKGDKGERGWPGAPGFLGVKGETGNQGLPGDAGFPGQTGEKGDRGPQGVQGL
PGFKGADGPVGEQGQDGDRGEPGPRGSQGLPGPEGAFQTFKGEPGPPGLQGPFGPKGFPG
FPGAKGEQGPVGSVGFPGPSGVPGINGIPGQKGELGPTGPTGPRGYQGPPGTDGLPGPMG
LPGPASMAHGFLVTRHSQTTEVPQCPFGTVPVYIGYSLLYVQGNERAHGQDLGAAGSCLR
KFSTMPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPVTGENIEPFISRCSVCEAPA
MVMAVHSQTIMLPACPDGWISLWIGYSFVMQTSAGAEGSGQALASPGSCLEEFRSVPFIE
CHGRGTCNYYANTYSFWLATIERNEMFKKPTPSTLKAGDLRTHVSRCQVCMRQT
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atgccagggcgctggaccacgggctgcaagctgctggcactgctctgccttctccaggag
ctcatcagctgctacgaggctgcgggatgtaacgggtgtgcaactagcaaatgtgactgt
agcggagtaaaaggagaaaagggtgaacgaggatttcctggtctacatggcgttattggg
tttcctggccttcaaggaccagaaggacctcctggaccatttggacaaaaaggtgacacg
ggtgaaccaggacttccaggtaccaaaggaaatagagggcctcctggatctgctggattt
ccaggaaaccctggcctccctggcattcctggtcaagatggccctcctggcccgcctggt
attcctggctgcaatggtacaaagggtgaaataggaccattggggccacctgggcttccg
gggttaataggttatccgggccctccaggtttaccaggaataaagggagatccaggagat
gttattggtatgcagggattaatgataaaaggtgaaaaaggtttaccagggatcaatgga
ttaccaggtacacctgggttgccaggttttgaaggcccagtcggcccccctggtccacca
gggcgtacaggagcacctggtcaacctggacctccaggaccaaagggtcaaatgggactt
ggttttcatggaccaccaggtgaaaagggtgaaccaggaccaccagggcctccaggtccg
cagggccatgcatctgctgagaacagttcagtatggtatcgggaaaagggagaaaagggt
atgcaaggtgataaaggtgatcaaggcaataggggtgaccctggattaagtattaaaggt
gaaaaaggagaacccggaaaaccagggcccagaggaaaacctggaaaagatggtgaaaag
ggacaaaggggacatgatggtgtacctggtaggccaggatttgatggaatccgaggacag
gatggagaaagaggagaaaagggtgactctggaccaccaggaccaccaggactagtaata
catgatggccaacatactgttactggagaaaaaggagacacgggaccacctggttatcca
ggaagcaaaggagagaagggtgctaaaggtacaaatggaatacccggaagccctggacaa
ccaggtatttcaattcccggaccaaacggggctccaggattaataggggaaagaggtgaa
aaaggtgaacctggaatccctgggttatccctacctggacagaaaggtagcgaggggttg
cgtggacctcctggattccctggtccacccggtgcaatagaccctacacaggaatgcatt
ccaggacggcctggtgaacccggatcccctggaactccaggagaacaaggcttcactggg
gaaaggggtcagaaaggtgacaaaggagatgcttgctctacttgtgacacattgccatca
tctctaccaggaccaccagggcctcaaggtcctcctggcgaaccaggtatttctggtcaa
cccggaaacaagggagacagaggagaaccaggctatgatggccccccaggttcacctgga
tcacaaggtataccaggtcttatggggagacctggagcaaaaggatcccctggtgaagtt
tattttgaaccaaaactaaaaggagataaaggagatgctggtttacctgggctgacaggt
acgcctggtatagagggaaggccgggaagagatggtcagcctggacaaccaggtcccaaa
ggtgtttcgggaacaattggtgccaaaggggagcgtgggccccctggagacagtggattc
cctgggattcctggacagcgaggtttacaaggacctccaggaattggtccagcaggacag
gttggagaaagaggagaacctggagtaccagggtttggtggattacctggtaacccagga
agcaagggtgaacctggcaagttaagtgttgtaactggaccaccaggaccaatgggaggt
gcaggttctcctggatttccgggagaacaaggtgacaagggccctcaaggatttccaggg
agacctggatttccaggagaaaagggtgagcctggtcttgaagggaaaggaactcctggg
tctcctggtgaaaaaggtcatcaaggaatggagggtacacgtggtatagatggtagccct
ggtcagccaggtcgtgaaggtttacgtggtgaaccaggtgtagcaggaataaagggagag
ccaggactaggccttccaggccctaaagggtcacatgggccaccaggtcctcctggagcc
actggagaaaagggaagcacaggactcacaggtgtccctggagagcaaggtcttccagga
gttccaggatattctggtgctaaaggtgacactggaccagctggagcaccaggcatgaga
ggcaacccaggtgtaccaggatttggcccacttggggaaccaggccctcaaggagcacca
ggatcctcaggagttccaggtgaaaaaggagcaaagggagaaagaggctatccaggtttt
cctggaactgacatgcctggcccaaagggagacaaaggcacatcaggcatacctggcata
atgggtatgcctggggtaccaggaagtcaaggtccacctggaaatgatgggtctccaggt
cttcaaggacaaaaaggtgatatgggttttatgggagtgccaggaatccgaggccaaaca
ggtacaccaggaaatccaggtctgcctggagaaaaaggtgatctgggtccaactggattc
cgtggggaaacaggaactccaggtacaaaaggtgaaaagggagaacatggtttgcaaggg
cccccaggaacacttccacccatggaacatatgaagggtgataaaggagatcagggtata
acagggcaaattggacttgagggagaaaaaggattgcatggtgatttgggatccactgga
atgcctggaaaagacggggagcaaggaatgcctgggaaacaaggaccaaaaggagagaaa
ggttttcaaggaactccaggagctcctgggatgcctggactaaaaggatctgtgggagaa
atgggtttgccaggaacaactggaccaaagggtgaacatggtattcacggcactcctggt
cttccgggtgttactggaatcaaaggtgataaaggacttaaaggagaacaaggtcttcct
ggcattggcataccaggacctcctggcacaaagggcgatgcaggaactgatggtcttcaa
ggtgtaacaggtgaaaggggagacaaaggtgacattggtgtccctggaatgcctggatta
ccaggaccaaaaggatcaacgggctctgcagggtttccaggtaacccgggtatgcctgga
gagaaaggagagaagggcttctctggacaagatggttttccaggaacaaaaggactacaa
ggtgaacgtggaactgagggtccttctggctccattggagaaaaaggagaacctggatat
gatgggattccgggaacaccaggagaaaagggtgaaccaggtatacctgggaggggcgtt
cctggataccccggggaacgcggagaaaaaggtttcaaaggtgatgctggatttcctggt
tcacctggagctcctggcttccctggtattaaaggtgatcaagggtttcctggaaaccaa
ggtgtacgtggccaacagggtgttcctggacttcctggaatggcaatggatggaccaaaa
ggtgacaagggacagcctggtccttcaggatttccaggtgttcctggacctgtgggtgtt
gctggctttccaggacaggagggagcaaaaggagacaaaggtgaaagaggttggcctgga
gcccctggttttcttggagtaaaaggtgaaactggaaatcagggtcttcctggagacgca
ggttttccgggtcaaacaggagaaaagggtgatagaggacctcaaggagtgcaaggatta
ccaggatttaaaggtgcagatggtccagtgggagagcaaggacaagatggagaccgagga
gagcctggaccaagaggatcacaaggacttcctgggcctgaaggtgcattccagacattc
aaaggagaacctggtccacctggactacagggtccctttggtccaaaaggttttcctggt
tttccaggtgctaaaggagagcaaggtccagttggttcagttggcttccctggtccaagt
ggagtgccaggaataaatggtattccagggcaaaaaggagaattgggtcccacggggcca
acaggtccaagaggatatcaaggtccaccaggtacagatggcttacctggtccaatgggt
ttacctggtccagcttctatggctcatgggttcctagtgacaaggcacagtcaaacaact
gaagttccacaatgtccctttggtacagttccagtctacattggctactcacttctctat
gtacaaggaaatgaaagggcacatggacaagatcttggtgctgcaggaagctgtcttcgt
aaattcagcacaatgcctttcctattttgcaatattaataatgtgtgcaactttgcatca
aggaatgattattcctactggttatccactcctgaaccaatgccaatgagcatggctcca
gtaactggggagaatattgaaccattcatcagcaggtgcagtgtttgtgaggcccctgca
atggtaatggcggttcatagccaaacaattatgttaccagcatgtccagatggatggatt
tcactgtggattggatattcatttgtaatgcaaaccagtgctggtgcggagggctcaggc
caagctctggcctcaccaggctcttgtttagaagaattccgcagtgtgccattcatagag
tgccatggacgaggaacctgcaactactatgccaatacctacagcttttggctcgctaca
atagagaggaatgaaatgttcaaaaaacctactccgtcaactctcaaagctggagacctc
cgtacacatgtcagccgctgtcaagtatgcatgagacagacataa
DBGET
integrated database retrieval system
