Dendrobates tinctorius (dyeing poison frog): 141063553
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Entry
141063553 CDS
T11000
Symbol
SHPRH
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH isoform X1
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dtc04121
]
141063553 (SHPRH)
Enzymes [BR:
dtc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141063553 (SHPRH)
Ubiquitin system [BR:
dtc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141063553 (SHPRH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4
PHD
zf-C3HC4_2
zf-RING_2
zf-RING_5
TPR_12
TPR_10
Motif
Other DBs
NCBI-GeneID:
141063553
NCBI-ProteinID:
XP_073413769
LinkDB
All DBs
Position
Unknown
AA seq
1644 aa
AA seq
DB search
MAGRRKRAAPVKLDDGAKKLLNWNMHEDRRNDVMLDEDGASAEPSTSLSLINDSSERFSS
LDESEGPSSRPQREDSNDFKNILAPLSVDLSLLVLPFPGYDFWRALLGEFSVHVSSGKNF
SSDFHECSLTLTSTSSSRHTQLLLCVEKSIIDVDGPIQESGNTRSEEVFVETSLSGQMLK
DIMWLQKKKLIALYQRTAHNSELKFGIYLLEACLSKPEFLSEGHRRMKKSCFIIQKLMEK
FHDFAIPDISDDNKEESDQELQRQNIEELYDHVRQIHQREEQVLREDVQHPALIPVLRPY
QNEAVNWMLQRENFKNVPSNENALHPLWREVATMDGIIIYYNPFSGSIISEHPTAAQDWP
GGILADEMGLGKTVEVLSLILCHPRKDVKADLLTLPEGKAVNYFIPPPPKEKTKKSRAVD
NMQTYPSVRVMVLAAIKEMNTNRGVSAVGILKYVSSMYSYHMQRNHRLLKKTLHRLLSQK
IVEQVKGRGLQGSFKLGVNFKEQMTRDKPSVQKLNTRSSNKLQSVRTQLRENSEDLSETV
PDLNVLSKDHDYCAVSKASMPEKEPQGCTTNNGIPEQLGTSQDSPVTDEKSTNATDLEFI
SQEMDRHHSPVFPFNTSDYRFECMCGSLRHPDLKDRVQCLQCHLWQHAECVNYKRESVHT
APFYCPHCLVAMDPVPTGATLIISPSSICHQWVDEINRHVRSSSLHVMVYQGVKKHGFLQ
PQMLAEQDVVITTYDVLRTELSYVDIPHSNSKDGRRFRSQKRYMAIPSPLVAVEWWRICL
DEAQMVECTTAKAAEMALRLTGVNRWCVSGTPVQRGLEDLFGLVLFLGVDPYWVKHWWDQ
LLYRPYCRMNPLPLYRLIAKVMWRSAKKDVLDQIQIPEQTEDVHWLHFSPVERHFYHRQH
EVCCQDALAKLRKISDWSLKLSSLDRRTVSSILYPLLRLRQACCHPQAVRGEFLPLQKST
MTMEELLTSLQKKCRTECEEAHRQLVCALNGLAGIHIIKGEYPMAAELYREVLRSSEEHK
EKLKTDSLQRLHSTHNLLELLSAKHPGIPPTLRDDKLEEEIKELKQHYMIKSNAEVSEAH
QALQPVLQNLRELQRKINFSSPWWIDVIQRAIQNANDEDLVQRVQNELAVSYKHQVNKLS
MADKFRDCRGLQYIVTTEMEEVRKCQKQVREAVKNLEGPPSQEVIQTASICHLRVGRLPL
HICVFCKADELFTDYESKLFSHTVKGQTAIFEEMIEEENGLVDDRLPRTSRGLWAASELE
RSLKAILSFARSHRMDHWLTDEGTCFMELFEAWKKEYKLLHEYWMVLRNHVSAIDEISMA
TQRLRVRLPDEPKPNPPVLHIIEPHEVEQNRVKLLNDKAVAKSQLQKKLGQLLYLTNLEK
SQDKTSGGVNPEPCPICAKNLGKQWAVLTCGHCFCNECVAIIIDQYSVGTRRSAIKCAIC
RQTTSHKEISYVFTSEAANEERDIPVKGSHSTKVEAVVRTLMKIQSLDPGAKSLVFSTWQ
DVLDIIAKALQDNNMVFSQINGIQKFQENLSAFKYDPKINILLLPLHTGSNGLNIIEATH
VLLVEPILNPAHELQAIGRVHRIGQKKATIVHRFLIKATIEERMQAMLKTVDRSHTSTSM
KQSEASVLTVADLADLFSEAGELE
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcgccggaaacgtgcagctccagtcaaactggatgatggagcaaagaagctg
ctgaattggaacatgcatgaagatagaaggaatgatgtaatgctggacgaggatggtgca
tcagccgagccgagtacatcactttccctaataaatgacagttctgaaaggttctcatcc
ttggatgagtctgagggtccaagttcaaggccacaaagagaagacagtaatgatttcaaa
aacatcttggctccgttatctgtagatcttagtttattagtcttgccctttcctggttat
gatttctggagagctttgcttggtgaattcagtgttcatgtttcatccgggaaaaatttt
agttcagactttcatgaatgcagtcttacattgactagtacctcttcctccagacatacc
cagcttttgctttgtgtggagaaatcaattatagatgttgacggacctatacaagaatcc
ggcaatacgcgctcagaagaggtttttgtggaaacttcacttagcggccaaatgctgaag
gacataatgtggctgcagaagaagaagcttattgcactttatcaaaggacagcccataac
agtgagcttaagtttgggatctatttgttagaagcatgtctatccaaaccagaatttctc
agtgaaggacacagaagaatgaagaaatcttgttttataattcaaaagttgatggaaaag
ttccatgacttcgccataccagatatttcagatgacaataaagaagagtcagaccaagag
cttcagagacagaatattgaagaactttacgaccatgtcagacagatccaccaacgggaa
gaacaggttctgcgtgaagatgtgcagcatccagccctgatacccgtcctacgtccatac
cagaatgaagcagtcaattggatgctgcagagagagaacttcaaaaatgtgccttctaat
gaaaatgcattgcatccattatggagagaagtcgctacaatggatggaattataatctac
tataatcctttttctggaagtataatcagtgaacatcccaccgctgctcaagattggcct
ggaggtattctcgcagatgaaatgggtcttgggaagacagtggaagttctaagcttgatc
ctttgtcatcccaggaaagatgtcaaagcagacttgctgacattacccgaggggaaagca
gtgaactactttattccacctccacccaaagaaaagacgaagaaatccagggcagtggac
aacatgcaaacttatcctagtgtacgggtcatggttttagcagcaattaaagaaatgaac
acaaacagaggtgtgtccgcagttggcattcttaaatatgtaagctccatgtacagttac
cacatgcagaggaatcatcgactgctcaaaaagaccttgcataggctgctttcccaaaag
atagtagaacaagttaaaggtcgtggacttcaaggatcctttaaactgggggtgaacttt
aaagagcagatgacccgagataaaccttcagtccaaaaactgaacacaagatcttccaac
aagctgcaaagtgttaggactcaactcagggaaaacagtgaagacctttctgagactgtt
cctgatctaaacgtcttgtcaaaggatcatgactactgtgcagtcagcaaagccagcatg
ccggaaaaagagccacagggctgtactacaaataatgggattcccgagcagctgggtacc
tcgcaagattctcctgtgacggatgagaaatctaccaatgctactgatttggagttcata
tctcaggaaatggatcgccatcacagtccggtcttcccatttaatacctccgattaccgt
tttgaatgtatgtgtggtagtcttaggcatcctgacctcaaggaccgggtccagtgcttg
cagtgccatctgtggcaacacgcagagtgtgtaaactataagagggaaagtgtccacacc
gcacctttctactgcccacattgccttgtagcaatggatcctgttccaacaggagcaacc
ttgatcatttctcctagttccatctgtcaccagtgggttgatgaaattaatcgtcatgtt
cgctcatcctcccttcatgtcatggtatatcaaggtgttaagaaacatggcttcctacaa
cctcagatgttagcagagcaggatgtagtcataaccacttatgatgttctgagaactgag
ctaagttatgtggacattcctcacagcaatagcaaagacgggcgacgatttcggagccaa
aaacgctacatggcaataccaagccctctcgttgctgtggagtggtggcggatttgtctc
gatgaagcacaaatggtggaatgcaccacagcaaaggctgctgaaatggctttgcgatta
acaggggtgaataggtggtgcgtgagtgggacaccagtacagaggggcttagaagattta
tttggactagtgctatttcttggagtggacccttactgggtgaaacactggtgggaccag
ctactctacagaccatactgcaggatgaatcctcttccattatatcgccttattgccaaa
gttatgtggaggtccgccaaaaaagacgttcttgatcagattcaaatcccagaacaaaca
gaagacgttcactggcttcacttttctccagtggagagacatttctatcacaggcagcat
gaagtttgttgtcaggatgctctagcaaagttacggaaaatctccgattggtctctcaag
cttagtagcttagacagacggactgtatcctccatcctatatcctctattgaggctaagg
caggcttgttgtcacccgcaggctgtgcgtggggaattcttaccattgcagaagagcaca
atgacaatggaagaactgctgacatctctccagaaaaaatgtcgaacagagtgtgaagag
gctcatcgccagcttgtctgtgctcttaatggtttggctggaatccacatcattaaaggt
gagtaccctatggctgccgagttgtatagggaagttttaagatcatcagaagaacacaaa
gaaaaactaaagactgactctctacaaagactacactccacacacaaccttctggaactg
ctttctgcaaagcatcctgggatcccgccaaccttgcgcgacgacaagctggaggaagag
ataaaagaacttaagcaacattacatgatcaaatcgaatgctgaagtctctgaggcccac
caagctctacaaccagtcctgcaaaatttacgtgaactgcaaagaaagattaacttctcc
tctccctggtggattgatgtcatccagcgtgctatccaaaatgctaatgatgaggatctt
gttcagcgtgtgcaaaatgaattagcggtcagctacaaacaccaagtgaataagttgtcc
atggcagataaatttcgggactgcagaggtcttcagtacattgttaccactgaaatggaa
gaagtgagaaagtgtcagaaacaagtcagagaggcggtgaaaaatctggaaggtccccca
tctcaagaggtcatccagacggcatcaatatgccaccttagagtcggacggctgccactc
catatctgtgtcttttgtaaagctgatgaattattcacagattacgagtccaaactcttc
tctcatacggtaaaaggacagactgctatttttgaagaaatgattgaagaagaaaatgga
ttggtggatgatcgtttacctagaactagccgtggcctgtgggcagctagtgagcttgaa
agatctttgaaagccatactatcatttgccagaagtcaccgcatggaccactggcttact
gatgagggcacatgcttcatggagctgtttgaggcatggaaaaaagaatataagttgctt
catgaatactggatggtgctacgtaaccacgtgtctgctattgatgagatttcaatggca
acccagcgtctccgagttcggcttcccgatgaacccaagccaaaccctcctgttcttcac
atcattgaaccacatgaggtggagcagaatcgtgtgaagcttcttaatgacaaagccgtt
gcaaagtctcagttgcagaaaaaattgggccagctcctttaccttacaaacttagaaaag
tctcaggataaaaccagtggaggagtgaatccagagccttgtccaatatgtgcaaaaaac
ctgggaaagcagtgggcagtactgacatgtggccattgcttctgcaatgaatgtgtagca
atcattatcgatcagtatagtgttggtacaaggagaagtgccattaaatgtgctatatgc
agacagaccacatcacacaaggagatctcctatgtgttcacaagtgaggctgcaaacgaa
gagagagacattcccgtaaaggggagtcattccacaaaagttgaggcagttgtcagaaca
cttatgaaaatccaatctctggatccaggggcaaaatcactggtcttctctacatggcag
gatgtattggacattatcgcaaaagctctgcaggacaataatatggtcttctcacagatc
aatgggatccagaagtttcaggaaaatctttcagcatttaaatatgatcccaagatcaac
attttacttcttccattacacactggatccaatgggctgaatattattgaggctactcat
gtgctcttagtagagccaattttgaacccagcacatgaacttcaggcaataggtcgcgtg
cacagaattggccaaaaaaaagctacaattgttcatcggtttctgattaaagcaacaatt
gaagaaaggatgcaagcaatgttaaagaccgttgaccgaagtcatacaagtacatcaatg
aaacagtctgaagcctccgtcctgactgttgccgaccttgctgacctgttttctgaggca
ggagaactcgaataa
DBGET
integrated database retrieval system
