Dendrobates tinctorius (dyeing poison frog): 141067727
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Entry
141067727 CDS
T11000
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Pathway
dtc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141067727 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dtc03041
]
141067727 (SF3B1)
03036 Chromosome and associated proteins [BR:
dtc03036
]
141067727 (SF3B1)
Spliceosome [BR:
dtc03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
141067727 (SF3B1)
Complex B
141067727 (SF3B1)
Complex C
U2 SnRNP specific factors
141067727 (SF3B1)
Chromosome and associated proteins [BR:
dtc03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
141067727 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
Motif
Other DBs
NCBI-GeneID:
141067727
NCBI-ProteinID:
XP_073414257
LinkDB
All DBs
Position
Unknown
AA seq
1303 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKANLDDTQGVGLDSTGYFDQEIYGGSDSRFTGYVTSIAA
NEQEDDDEDPTASFAQKKPGYHAPVALLNDIPQSAEQYDPFAEHRPQKIADREDEYKKYR
RTMIISPERLDPFADGGKTPDPKTNARTYTDVMREKQLVKEHREIHQQLAEKAKSGDLKV
VSGSNASSSQPPSKRKRRWDQTDQTPGSTPKKVSSWDQAEVTPGHTPSLRWDETPGRAKG
NETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTER
DTPGHGSGWAETPRTDRGGESIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPIG
TPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGY
VPIRTPARKLTATPTPLGGMTGFHMPPEDRTMKSVSDQPSGNLPFLKPDDIQYFDKLLVD
VDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMS
PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA
KAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQAR
HTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYGI
ESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPD
EEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVELA
NKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAFQ
EQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVV
MKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLT
PILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTF
GYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPEL
NVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYG
FGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKV
RDVYWKIYNSIYIGSQDALIAHYPRIYNDEKNTYIRYELDYML
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgctaaaacacacgaagacattgaagcacagatacgtgaaattcaagga
aagaaggcaaacctagatgacacgcaaggagttgggcttgattcaactggatattttgat
caagaaatttatggtggcagtgacagtagatttactggttatgttacttctattgctgca
aatgaacaagaagatgatgatgaagatcctacagcatcatttgcacagaagaaaccagga
tatcatgctcctgttgctttattaaatgatattcctcagtctgctgaacagtatgacccg
tttgctgaacacagaccacagaaaattgcagacagagaagatgaatataagaaataccga
cgtacgatgattatatctccagagcggcttgatccttttgcagatggaggaaaaactcca
gatccaaaaacaaacgctcggacttacactgatgtcatgcgagaaaagcaactggttaaa
gaacatcgtgagatccatcaacagcttgcagaaaaggcaaaatctggtgatttgaaagtg
gtcagtggatctaatgcatcttcatctcagccaccttcgaagcgcaagcgacgatgggat
cagacagaccaaacgccagggtcaaccccaaagaaggtttccagctgggaccaagccgag
gtcactcctgggcacactccttcactgaggtgggatgaaacccctggccgtgctaaagga
aatgaaactcctggagctacacctggttcaaaaatttgggatcctactccgagccatact
cctgctggagcagcaacccctggtcgtggggatactccaggacacgcaacaccaggccat
ggaggagcaacttctagtgctcgtaaaaatagatgggatgaaactcctaaaacggagcgt
gatacccctggacatggaagtggttgggcagaaactccacgtacagatcgtggtggagaa
tcaattggtgaaacccctacacctggagcgagtaaaagaaagtctcgttgggatgaaaca
ccggctagccagatgggagggagcacccctgttttgaccccagggaaaacaccaattggt
acacctgccatgaatatggcaactccaactccaggacatataatgagtatgacccctgaa
cagcttcaagcatggagatgggaacgtgaaattgatgaaagaaaccgtccactttctgat
gaagagctggatgctatgtttccagagggttataaggttctcccaccacctgctggctat
gttcctatacgtacaccagcgaggaaattgactgcaacacccactccattaggtggaatg
actggatttcatatgcctcctgaagacagaaccatgaaaagtgttagtgatcagccttct
ggaaaccttccattcttaaaacctgatgatattcagtactttgacaaacttctggtcgat
gtagatgaatcaacacttagtcccgaagagcagaaagagaggaaaattatgaagttactg
ctgaaaataaagaatgggacacctccaatgagaaaagcagctttgcgacaaattacagac
aaagcccgggagtttggcgctggaccactttttaatcaaattcttcctctactgatgtcg
ccaacccttgaagaccaggaacgacatttgttagtgaaagtaattgacagaattttatac
aagttggatgaccttgttcgaccatatgtgcataagattcttgtggttattgaacccttg
ctcattgatgaagactattatgcgagagtagaaggacgagaaataatatccaacttggca
aaggctgctggcttggcaacaatgatttcaacaatgagaccagacatagacaatatggat
gaatatgtccgtaacacaactgctagagcttttgcagtggttgcctctgcccttggcatc
ccttcattgcttcctttcttaaaagccgtctgtaaaagcaagaaatcatggcaagcccgt
cacactggaatcaaaatcgttcagcaaattgccattcttatgggatgtgccattttgcca
catctaagaagtttggttgagattattgaacatggattggttgatgagcaacagaaagtt
cgtacaatcagtgctttggcgattgcagctttagccgaagcggccactccatatggcatt
gaatcgtttgattccgtcctgaagcctctatggaagggtattcgacagcacagaggaaag
ggtcttgctgcattcttaaaggctattggatacctcattcctctcatggatgcggagtat
gcaaactactatactagagaagtgatgttgattttaatccgagagtttcagtctcctgat
gaagaaatgaagaagattgtccttaaggttgtcaagcagtgctgcggtactgatggagtc
gaagcaaattacataaagacagaaattcttcccccattttttaagcacttctggcagcat
agaatggctctggacagaagaaactatagacagttggtggacacaactgttgagcttgca
aacaaagtgggagctgcagaaataatttctagaatcgtggatgacttaaaagatgaagca
gaacaatacagaaaaatggttatggaaacaattgaaaaaattatgggaaatcttggagct
gcagatatagaccataagttggaagagcagttgattgatggaattctttacgctttccag
gagcagactacagaggactctgtaatgctgaatggctttggtactgtagtcaatgctctt
ggaaaaagagtcaaaccatatctcccccagatatgtggtactgttttatggcgcttgaac
aacaaatctgcaaaagtgagacaacaggctgcagacttaatatctcgaactgcagttgtc
atgaaaacctgtcaagaggaaaaattgatgggccatttaggtgtggttttgtatgagtac
cttggagaagagtatcctgaagtacttggaagcattttaggagcactgaaagcgattgtt
aatgttataggtatgcacaaaatgactccaccaataaaagatttactgccaagacttaca
cccattttgaaaaacaggcatgaaaaagtacaggagaactgcattgatttggttggtcgc
attgctgacaggggagcagaatatgtatctgctagagaatggatgaggatttgttttgaa
ctattggaattgctaaaggctcataagaaggcaatcagaagagccactgtaaacaccttc
ggctacattgctaaagctatcgggccacatgatgttcttgcaacacttctaaataacttg
aaagtacaagaaagacaaaacagagtatgtactactgtagctattgccattgtggctgaa
acatgttcaccttttactgttctccctgcgctgatgaatgaatatagagtgccagaattg
aatgtccaaaacggtgtgttaaaatctctgtccttcctctttgaatacattggagaaatg
ggaaaagattatatctatgccgtaacaccactgcttgaagatgccttaatggacagagat
cttgttcataggcaaacagcaagtgcagttgttcagcacatgtcgttaggtgtttatgga
tttggttgtgaggattctttgaaccatctgttaaattacgtatggccgaatgtgtttgaa
acctctcctcatgtaatccaagctgtcatgggagcacttgaaggtcttagagttgctatt
ggaccgtgtcgaatgctgcagtattgcttgcagggccttttccatccagctagaaaagta
agagatgtctattggaaaatctacaattcaatatatattggatcacaagatgctctcatt
gcacattatcctcgtatctacaatgatgaaaagaacacttacattcgctatgagcttgat
tacatgttgtaa
DBGET
integrated database retrieval system
