Dendrobates tinctorius (dyeing poison frog): 141068265
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Entry
141068265 CDS
T11000
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Pathway
dtc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141068265 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dtc03041
]
141068265 (PRPF4)
Spliceosome [BR:
dtc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
141068265 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
PRP4
ANAPC4_WD40
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Ge1_WD40
WD40_like
Beta-prop_WDR11_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
141068265
NCBI-ProteinID:
XP_073414387
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MVDVSQLYCLVRFAQNTSPSSVSSSPDWLHSYFRHLFSLPVTVISPSDDPETVAIACGCC
WRRRADDWRYLSAADMSDDEGAPVVKKSRIFYGSLADKEKERISKGETSLGKAAVKAGIE
SGNINIGGGESFDLEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITL
FGEGPAERRERLRNVLSVVGTDALKKNKKEDEKSKASREEYQHTWYHEGPNTLKIARLWI
ARYSLPRAMLRLENAREYRVIPESTRTSQKQDLHKSLRSLNNFCSQIGDDRPLSFCHFSP
NSKLLATACWSGLCKLWSIPDCQPVQTLRGHNTNVGAIVFHPKSTLSLDEKDVNLASCAA
DGSVKLWNLESDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDKSWRLWDLEAQEEILHQ
EGHSKGVYDLSFHLDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYSINFSPNGFH
IATGSGDNTCKVWDLRQRRCIYTIPAHQNLVSAVRFQPTNGQYLLTGAYDNTAKVWTHPL
WSPLKTLAGHEGKVMGVDISSDGELIATCSYDRTFKLWMVE
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgtatctcagctgtactgtcttgtgcgctttgcccagaacacatcaccctcc
tcggtctcctcctcacctgactggctccacagctacttccgccatctcttctcacttccg
gttaccgtcatttccccctctgatgacccggaaacagttgctatagcgtgtggctgctgt
tggaggcggagagcggatgattggcgttatctctccgcagcagacatgtcggacgatgag
ggggccccggtggtgaagaagtctcgtattttctacggcagtttggcagataaagaaaag
gagcgaatctccaagggggagacgtctctggggaaagccgcggtgaaggctggcatagag
tccgggaacatcaatatcggaggaggggagtcatttgaccttgaagagcacatcagcgag
agacaggcagaggtactcgctgagttcgagcgtaggaagcgagcgcgacagatcaatgtg
tccaccgatgactctgaggtgaaggcctgtctgagggccctcggggagcctatcactctg
tttggagaggggccggcggagcggagagaaaggttgcgaaatgttctctctgttgtcggc
acagatgccttgaaaaaaaacaagaaagaagatgagaaatccaaagcctcaagggaagag
taccagcacacttggtatcacgaggggccgaacacgctgaagatcgctcgactgtggatt
gcacgatactccttacctcgggcgatgcttcgattggaaaatgcccgggaatacagagtc
atcccagaatccaccaggacatcccagaaacaagacctgcataaatccctgcgctccttg
aacaatttctgcagtcagattggagacgatcgccctctgtccttctgtcactttagtccg
aactcaaaacttttggcaacggcgtgctggagcggactgtgcaagctttggtcaattcca
gattgtcaacctgtacagaccttaagaggacacaacacaaatgtaggcgccattgtgttt
caccctaagtccacgctgtcactggatgagaaggatgtgaatctggcatcctgcgctgcg
gacggttctgtcaaactgtggaacctggaaagcgatgaacccgttgcagatattgaggga
cacacagtgagggtggcgcgagtgacatggcatccatctgggcggtttttgggcaccaca
tgttatgacaagtcctggcgcttgtgggacttggaagcacaagaggaaattctgcatcag
gagggtcacagtaaaggggtgtacgacctctctttccacctggacggctccctggctggc
actggaggtctggacgcctttgggcgagtgtgggatctgcggaccggccgctgtattatg
ttcctagaagggcacctgaaagaaatctacagcattaacttctctcctaatgggtttcat
attgctaccggcagtggggacaacacctgtaaagtttgggacctccggcagcggcgctgc
atctacaccatcccggctcaccagaacctggtcagcgctgtgcggttccagcccacaaat
ggacaatacctgctgaccggcgcttatgacaacaccgccaaagtctggacgcacccgctg
tggtctccactaaagacacttgctggtcacgaggggaaagtgatgggtgtggacatatcc
tcagacggagaactcatagccacctgctcctacgacagaacttttaagctttggatggtg
gaataa
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