Dendrobates tinctorius (dyeing poison frog): 141069526
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Entry
141069526 CDS
T11000
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Pathway
dtc03082
ATP-dependent chromatin remodeling
dtc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
141069526 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
141069526 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dtc01009
]
141069526 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dtc03021
]
141069526 (SMARCB1)
03036 Chromosome and associated proteins [BR:
dtc03036
]
141069526 (SMARCB1)
Protein phosphatases and associated proteins [BR:
dtc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
141069526 (SMARCB1)
Transcription machinery [BR:
dtc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
141069526 (SMARCB1)
SWI/SNF complex
141069526 (SMARCB1)
Chromosome and associated proteins [BR:
dtc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
141069526 (SMARCB1)
PBAF complex
141069526 (SMARCB1)
SWI/SNF complex
141069526 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
141069526
NCBI-ProteinID:
XP_073415266
LinkDB
All DBs
Position
Unknown
AA seq
378 aa
AA seq
DB search
MIMALSKTFGQKPVKFQLEEDGDFYMIGSEVGNFLRMFRGSLYKRYPSLWRRLATVEERK
KIVASSHGKKYHGYTTLATSVTLLRASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR
NSQWVPTLPNSSHHLDAVPCSTTINRNRLGRDKKRTFPLCFDDHDPAVIHENASQPEVLV
PIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIES
YPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEF
VTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRD
QDRNTRRMRRLANTAPAW
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggcgctgagtaaaacatttggccaaaagccggtgaaatttcagctggaagaa
gatggagacttttacatgatcggctccgaggtggggaattttctgcgcatgtttagaggt
tcactatacaagaggtacccctctctgtggagacgcctggccacggtagaagaaaggaag
aagattgtcgcctcttcacatgggaagaaatatcacgggtacacgacattagctactagt
gtcactctactgagagcttcagaagtcgaagagatcctagatgggaacgatgaaaaatac
aaagctgtttctatcagcaccgagcctccgacatatctcagggaacaaaaagcgaaaaga
aacagccagtgggtcccaacactgccgaacagctctcaccacttggatgctgtgccctgt
tctactactattaatcgaaaccgcttaggccgggacaagaagagaaccttcccgttgtgt
tttgatgatcacgatccagcagtgattcacgagaacgcttcccagccagaggtgctagtc
cctatccgcctggacatggagatcgatgggcagaagttgcgtgatgcgtttacatggaac
atgaatgagaagttaatgaccccggaaatgtttgcggagattctctgtgacgacctagac
ctcaaccctcttgcctttgtcccagctattgcgtcagctatccgccagcagatagagtct
tatcctactgacagcattctggaggaccagtctgaccagagagtcatcattaagctaaat
atccacgttgggaacatttccttggttgaccagtttgagtgggatatgtccgaaaaggag
aactccccagagaagtttgcactgaagttatgttccgagcttggtttgggtggcgagttc
gttaccactattgcatacagcatccgtgggcagctcagctggcatcagaagacttatgca
ttcagtgaaaaccccttgccaacagtggagatcgcaattcgaaatacaggtgatgcagat
caatggtgtcctcttctggagacccttacagacgcagaaatggaaaagaagatccgtgac
caggacaggaacaccaggcgtatgagacgtcttgccaacactgcaccggcctggtaa
DBGET
integrated database retrieval system
