KEGG   Dendrobates tinctorius (dyeing poison frog): 141073151
Entry
141073151         CDS       T11000                                 
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 isoform X1
  KO
K13175  THO complex subunit 6
Organism
dtc  Dendrobates tinctorius (dyeing poison frog)
Pathway
dtc03013  Nucleocytoplasmic transport
dtc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dtc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    141073151 (THOC6)
  09122 Translation
   03013 Nucleocytoplasmic transport
    141073151 (THOC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dtc03019]
    141073151 (THOC6)
   03041 Spliceosome [BR:dtc03041]
    141073151 (THOC6)
Messenger RNA biogenesis [BR:dtc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     141073151 (THOC6)
Spliceosome [BR:dtc03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    141073151 (THOC6)
SSDB
Motif
Pfam: WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_EML EIF3I Beta-prop_WDR36-Utp21_1st WD40_Gbeta ANAPC4_WD40 NBCH_WD40 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_ACSF4 Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_WDR41 Beta-prop_NUP159_NUP214 Beta-prop_LRRK2 Beta-prop_DCAF12 WDR54 Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 141073151
NCBI-ProteinID: XP_073416627
LinkDB
Position
Unknown
AA seq 354 aa
MWSQRHSTLFFIFCHPVRDYYRSLCSVDVSRSLELLHMTIFSQNLSPCGKFLAVGNNLGE
IGVFSLSSALSSEAKEQNKEPTAVIQAHSGPVYSLTSTERHLISAGGNEVKGWLWSDICK
KGCVEAWSRPAPSSRNSLETPEINSLIINQKDNSLLLGGGSCHIHTMDLESGTFTMTLQG
HEDYIHCLSLREQQRECVSGSEDGSVRLWDLRTGSQTHKIEMYKYEECARPQYGKWISCV
ATDSDWMVCGGGPMLSLWHLRSVTPTTIFPISESQQQVMFYQDMILSAGQAPHINHCQIT
GDIRAQIPSSPCSIYSLCINESSQENKVLTAAGSSSKIDVFTNFRYRAFSLSFT
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgtggagccaacgccattccaccctcttctttatcttctgtcaccctgtgcgggattat
taccgctctttatgctctgtggatgtctctcgctcgctcgagcttctccatatgacgatc
ttcagtcagaacctctctccttgcggcaagtttcttgctgttggaaacaacctgggagaa
atcggggtgttcagtctctcgtccgctctcagctcagaggccaaggagcagaacaaggaa
ccaacagctgtcatccaagcccactcaggccccgtgtacagtttgacttccactgaacgt
catctgatcagcgcagggggaaacgaggtgaagggctggctctggagcgacatctgtaag
aagggctgtgtggaagcatggagtcgcccggccccctcctccaggaacagcctggagacc
ccggagatcaacagtctaataatcaaccagaaggataactctctcttgctcggtggaggc
agttgtcacattcacaccatggacctggaatcggggacttttacgatgaccctccaaggg
catgaagattacatccactgcctgtctctacgggagcagcagcgagagtgcgtgtctggc
agtgaggacggctcggtcaggctgtgggatctcaggacagggtcacagacgcacaagatt
gagatgtacaaatatgaggagtgtgcgcggccgcagtacggcaagtggatcagctgtgtg
gctactgactccgactggatggtttgtggtgggggccctatgttatcactatggcacctc
cgctccgtcaccccgaccaccatcttcccaatctcggagagccagcagcaggtgatgttc
tatcaggacatgatcctgtctgcggggcaggcaccacatatcaaccactgccagataaca
ggagacatccgcgctcagatcccgagctctccatgttccatctactcactgtgcatcaac
gaaagctcacaggaaaacaaggtccttacagccgccgggagcagctccaaaattgatgtt
ttcaccaatttcagataccgtgcgttctccctcagcttcacctaa

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