Dendrobates tinctorius (dyeing poison frog): 141073810
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Entry
141073810 CDS
T11000
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Pathway
dtc03015
mRNA surveillance pathway
dtc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141073810 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
141073810 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dtc03021
]
141073810 (SYMPK)
03019 Messenger RNA biogenesis [BR:
dtc03019
]
141073810 (SYMPK)
Transcription machinery [BR:
dtc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
141073810 (SYMPK)
Messenger RNA biogenesis [BR:
dtc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
141073810 (SYMPK)
U7-dependent histone pre-mRNA processing factors
141073810 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
INTS7_N
Motif
Other DBs
NCBI-GeneID:
141073810
NCBI-ProteinID:
XP_073417356
LinkDB
All DBs
Position
Unknown
AA seq
1202 aa
AA seq
DB search
MMALSVAYQFFTQNDAASDSLCTSEKVVELLNMAALAANDSKITMLKQVQELIINKEPTL
LDNFLDEIIAFQADRSVDVRKFVVNFIEEACKLDNELLVKLIANLHMLLKDENVNVVKKS
ILTMTHLYKVALQWVARSRPTSDRQESCWDLVTEMATDILQLLESDNDGIRTHAVKFVES
LIVTLSPRTQDSEIPKRQEGDISLEQIPTDHSYLKYNMLRDVGKQALKELLKFMAHPAIS
SINLTAALGSLASIARQRPMFMAEVIQAYETLHANLPPTLAKSQVSSVRKNLKLQLLSVL
RHPSSIEYQGPISTLLMDLGTGQAEITRHLPPPRELNRKRTREGGEGGQKKSRTDAPLAD
DDDEKDTIPHTSLPPAPPSTMSATDITADFLRPLLTPESVANLVLISMVYLPDTMPASFQ
ATYTPVESAGTDAQIRHLARLMATQMTAAGIGPGVEKLEKIKESPVELVEEESMKPEGLI
IKRRVSTLLTHGQAISVVGYQAKNAKGDLAPLAKKRPEPILPGAQLKAAGAIGRKKIFKL
KEVLEPLTETQVKELKLTAVQRILQAERSVGGSGAAQMRVKVLARLVTLFDTSLKDEVLS
HFLFDPRGRLDLALAWLFQEYCEYQSGAGEEGYEECLIGILTGLQERPDQRDGVFTKVVL
EAPLLTDSALDVIRKYCEDEGRSYLGMSTLRDLILTRPARQFQYLHLLLDLSSNEKDKVR
QQALLLIKRMYEKESLRQYIEKFALNYLQLLVHPNPPSVLFGADKDTEVAAPWTEDTVKH
CLYLYLALLPQNHKLIHELASVYTEATADIKRTVLRVIETPIRGMGMNSPELLLLVENCP
KGAETLVTRCLHILTDKVPPSPELVKRVRDLYQKRLPDVRFLIPVLNGLDKKEVIQALPK
LIKLNPIVVKEVFNRLLGTQQGDGSSSISPLTPGDLLVALHNIDSSKCDMKSVIKAINLC
FSARSVYTSEVLAVVLQQLMDTTPLPMLLMRTVIQALGMYPRLGGFIMNILTRLIYKQVW
KYPKVWEGFIKCCQRTKPQSFSVLLQLPPPQLQSVLQTSPDLRDPLLAHVRAFTANQLAH
VPHTIMAILEAESRTDTEPDDIPQTEEVTEIPSNNLIAHHLAQEKSLKRHVLEEQKAQSA
PVQEEEAEMDFPILLLDDEEEEMKIPGKESPQKEESESALDAITQSPPPEEPMEEGVDQI
ED
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgctcagtgtggcctaccagtttttcacccagaatgatgcggcctctgacagc
ctctgcacttcagagaaggtggtggaactgttgaacatggccgccctggccgccaatgac
tccaagatcacgatgctgaagcaggtccaagagctgatcataaacaaggaaccgacgctg
cttgataacttcctggatgagatcatcgctttccaggctgacagatctgtggacgttcgc
aagtttgtggtgaacttcatagaagaagcctgtaaactggataacgagcttctcgtaaag
ctgattgctaatctgcacatgctgctgaaggacgaaaacgtgaatgtggtgaagaagtcc
atcttaaccatgacccatctctacaaagtggccctacagtgggttgcccggtctcgccct
acatcagatcgccaagagtcctgctgggatctggtaactgaaatggcaaccgacatcctc
caacttctggagtctgacaacgatgggatccgcacacatgcagtgaagtttgtggagagt
ttgattgtgactttgtctcctcgtactcaagatagtgaaatccccaagaggcaagagggt
gacatcagtctggagcaaattcctacagatcactcctacctgaagtacaatatgttacga
gatgtcgggaaacaagccctcaaagaacttctgaaattcatggctcaccctgcaatctcc
agcatcaacctcactgcagcactcggttctctggcttcaatcgctcgtcagagacccatg
ttcatggcggaagtcatccaagcctatgaaactctacatgcaaatttacctccaactctg
gccaaatctcaagtgagcagcgttaggaaaaacctgaagttacagctgctcagcgtactc
cggcacccgtcatctattgaatatcaggggccaattagcacccttctaatggatctgggg
accggacaggcagagattactcgccacctgccaccacccagggaacttaaccgcaagagg
accagagagggcggagaaggaggccagaagaagagccgaacagatgcccccttggcagat
gatgatgatgaaaaggacaccatcccgcacacctccttaccccctgctccccccagtaca
atgtctgccactgacatcactgctgatttcctgcgtccgttactcactccagaaagtgtg
gccaatctggtcctcatcagtatggtctacctgccagatacgatgcctgcctccttccag
gccacttacaccccagtggagtctgcgggaacggatgctcagataaggcaccttgcgcgt
cttatggctacacagatgacagctgctggaattgggcctggtgtggaaaaattggaaaag
ataaaggaatctccagtggaattggtggaggaggaaagtatgaaaccagaagggttaatt
atcaaaagaagagtctccaccctgctcacccatggccaggccatttccgtggtgggctac
caggctaagaatgctaagggtgacttagccccacttgccaaaaaaagaccggagcccatt
ctgccgggggcgcagctcaaggcggctggagccataggacgtaagaagatcttcaaactg
aaggaagttttggagccattgacggagacacaggtcaaagaactaaagctaactgcagtg
cagaggatattacaggcagagcgcagtgtggggggcagcggggccgctcagatgcgggtg
aaggttctggcgcgattggtgaccctgttcgacacttcactgaaggatgaagtcttgagc
cactttctctttgaccctcgtggacgtctggacctggctctggcttggctgttccaggag
tattgtgaatatcagtccggggcaggagaagagggatatgaggagtgtctgattgggatt
ttgacaggactgcaggagcggccggaccagagggacggggtcttcacaaaagttgtcctg
gaggctccgctgctcacagactctgcgctggatgtcatccgtaaatactgcgaggacgag
ggtcgcagttacctggggatgtccacgctgagagatctcatcctcactcgcccggctcgg
caattccagtatttgcatttacttctggacttgagctctaacgagaaggacaaggtccga
cagcaggcgctgctgctcatcaaacgcatgtatgaaaaggagagtctccgccaatacata
gagaagtttgcactgaattacctccagctgctcgtccacccaaaccccccatctgtgctc
ttcggggcagataaggacacagaggtggctgcaccctggacggaggacacggtgaagcac
tgcctgtacctgtacctggctttacttccgcagaaccacaagctgatccatgagctggca
tcagtctacaccgaggccaccgcagacataaagcggactgtgctgcgcgtcatcgagacc
ccgatccgtggcatgggcatgaactcccccgagctgctcttgcttgtggagaattgcccc
aagggggcagaaaccctggtgactcgttgcctgcacatcctgactgataaagttccgccc
tcccccgagcttgtgaaacgcgtccgggatctgtatcagaagcgtctcccagacgtccga
ttcctgatcccagtgctgaatggcctggacaagaaagaggtcattcaggctttacccaaa
ctcatcaagctcaacccaattgtcgtgaaagaggtgttcaatcgactcctgggaacacag
caaggagatgggagcagctctatttctcctctgactcctggagacctactggtcgctctt
cataacatcgattccagtaaatgtgacatgaaatctgtcattaaagccattaacctgtgt
ttctctgcgcgctcggtgtacacgtctgaagtgctggccgtggtgcttcagcagctgatg
gacaccaccccgctacccatgcttctcatgaggacggttatccaggccctgggcatgtac
cccaggttagggggcttcattatgaacatcctcacccgactcatctacaagcaggtctgg
aagtatccgaaggtttgggagggtttcataaaatgctgccaaagaaccaaaccgcagtca
ttcagtgtccttcttcagctcccccctccacagctgcagtccgtcctccagacgtccccc
gatctccgtgatcctctgctggcccatgttcgggcttttacagcaaaccagctggcccat
gtccctcataccatcatggcaattctggaggctgaatccagaacggacactgaaccggat
gacatcccccaaacagaggaggtaacagagattccatctaacaacctcatcgcccatcat
ttagcccaagaaaaatctcttaagcgacacgttctagaggagcagaaagcacaaagtgcc
ccagtgcaagaggaagaagcagagatggatttccccattcttctgctcgatgatgaagag
gaggagatgaaaattccaggaaaagagtctcctcaaaaagaagaaagcgagtccgcactg
gacgccataacgcaatctccaccccccgaggagccgatggaagaaggagtagatcaaata
gaagattag
DBGET
integrated database retrieval system
