Dendrobates tinctorius (dyeing poison frog): 141073866
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Entry
141073866 CDS
T11000
Symbol
COL11A2
Name
(RefSeq) collagen alpha-2(XI) chain isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Pathway
dtc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
141073866 (COL11A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dtc00536
]
141073866 (COL11A2)
Glycosaminoglycan binding proteins [BR:
dtc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
141073866 (COL11A2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_1
Laminin_G_3
ConA_2nd_BAM2
Motif
Other DBs
NCBI-GeneID:
141073866
NCBI-ProteinID:
XP_073417478
LinkDB
All DBs
Position
Unknown
AA seq
1800 aa
AA seq
DB search
MPQPQPRRCRVPGVPPLCSLALLLFWQLLRTQAAADPVDVLKGLQFQTQPEGVKQIPGFC
PARRSSTGGDVAYKISKQAQISAPTRQLFPGKFPEDFSVMALVRAKTGLQAFLLSIYNEQ
GVQQLGVELGRSPVFLYEDQSGKPAPEDYPIFSGVNLADGKWHRIALSVQKKSVTLILDC
KKKITKPLPRGNKPIVDTKGITVFGTRILDEESFEGDIQQLLIARNAQAAYDYCEHYSPD
CDSALLNSPQAQDPNTRQDYAEEEVEYYEYPYYYDNKEEGTSAPPTSSAPEGGAAEQDPA
QTTEPVMTPEPTVLEQSPDYTVSPIGEDVYEVWEEEPTQEVPPNPQEKENAPSTDVKGSD
SFIEEYVIGEEENPTVGLDYEYVYKDYHEGSESTHLGPVLSAETPESGGAISGPRGLKGE
KGEAAHMESGSLVEGPPGAEGPAGHTGPPGIQGHPGPVGEPGERGPPGRHGLAGANGLPG
QPGSSVMLPFRFGASGGDKGPIVSAQEAQAAAILQQARLALRGPAGPMGYTGRSGPLGPP
GNNGLKGEQGDIGPQGQRGPQGLSGPPGKAGRRGRSGADGARGLPGEFGNKGERGFDGLP
GLPGEKGHRGDGGSQGPLGPPGEDGERGSDGDVGPRGLPGEPGVRGLLGPKGPPGVPGPP
GVRGMDGNVGPKGNLGPQGEPGPPGQQGTSGTQGLSGPQGAQGPPGETGPTGKPGLPGIP
GSDGPPGHPGKEGPGGFKGNHGPSGPQGPIGYPGPRGVKGVDGIRGLKGHKGEKGEDGFP
GFKGDFGVKGDKGEIGVPGSRGEDGPEGSKGRSGPPGDPGPLGLIGEKGKLGVPGLPGYP
GRQGTKGSLGFPGFPGANGEKGARGLSGKSGPRGERGPSGPRGQRGPRGATGKSGPKGTS
GGDGPSGPSGERGLPGPQGSNGFPGPKGPPGPPGKDGIPGHPGQRGEVGFQGKMGTTGPP
GVVGPQGAQGESGQMGERGHPGPPGPPGEQGLSGASGKEGTKGDPGGVGVPGKDGPAGLR
GFPGERGLPGTPGGPGLKGNEGPAGPAGPAGSPGERGGPGQGGPIGPPGRPGPQGPSGAS
GEKGVPGEKGPIGPAGRDGVQGPVGLPGPAGTPGISGEDGDKGEVGEHGAKGAKGNKGEH
GPPGPPGPIGPLGQPGTPGADGEPGPRGQQGIFGAKGDEGTRGFPGSPGPIGLQGLPGPS
GEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGIGNLGPPGEKGEPGETGVPGVQ
GESGPKGPRGDRGEKGESGQPGDPGPPGGKGPTGDDGPKGNPGPVGFPGDPGPPGEMGPR
GQDGAKGERGEDGEQGEAGSPGPTGENGPPGALGKRGPAGPSGPEGRQGEKGAKGEAGSV
GPPGKTGAVGPQGTQGKQGPDGLRGIPGAVGEQGRPGATGQAGPPGPVGPPGLPGLKGDN
GAKGEKGHPGLIGLIGPTGEQGEKGDRGLPGPQGKSGQKGEPGIAGVTGPIGPGGSAGQP
GSPGPKGAKGATGQAGPKGQKGVQGPPGAPGPPGEVIQPLPFQMPKKNKRSIDASQIMAD
EPTGDYADGMEEIYGSLNAIKKDIELMKTPLGTKEHPARTCLDLRLCHPELPDGEYWIDP
NQGCTRDSFKVFCNFSSGAESCIYPSKDIEKVKMSLWNTEKRETWYSKFRSGRKFSYVDS
DENPIGVVQLTFLRLLSVGARQNFTYHCHRSAGWHMASTDSYQKALHFMGANDEDLSFHT
SPYIKALRDGCSMRKGTDKTVLEIHTPRVEQLPLTDAMFMDFGEPNQKFGFEVGPVCFMG
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcctcagcccaggagatgcagggtccccggggtgccccctctctgcagcctg
gcgctgcttctcttctggcagctgttgaggacgcaggcagcagctgaccccgtggatgta
ctaaagggcctccaatttcagacacaacctgagggtgtaaagcagatccctggcttctgc
ccagcccgacgttcaagcactggtggagatgtggcctacaagatatccaagcaagctcag
atcagcgcccccacgcggcagctcttcccaggtaaatttccagaggacttttcagtcatg
gcgctggtacgagctaagactggcttgcaggcattcctcctgtccatttacaatgagcaa
ggagttcagcagctcggggtggagttaggacgctctcctgtctttctctatgaagatcag
agtggaaaaccagcccctgaagactacccaatcttcagcggggtcaatctggccgatgga
aaatggcaccggatagctctcagtgtacagaagaaatccgtaaccttaatactggactgt
aagaagaagattactaagccactgccccgagggaacaagcccattgtggacaccaaaggg
atcactgtgtttgggacccggattctggatgaagagtcattcgagggtgacattcaacaa
ctacttatagctagaaatgctcaggcggcttatgactactgtgaacactacagtccggac
tgcgactctgctctgctgaacagtccccaggcccaagaccccaacacaaggcaagactac
gcagaggaagaggtggagtattatgaatatccctactattatgacaataaggaggaaggg
acgtctgccccacctacatcaagtgcccctgaagggggcgccgcggagcaggaccctgcc
cagaccactgagcctgttatgacccctgagcccaccgtgctagaacagagcccagattat
actgtatcacccatcggggaggatgtttatgaggtttgggaggaagaacccactcaagaa
gttccacccaatccacaggaaaaggaaaatgctccttctacagatgtcaagggtagtgat
tccttcatagaggaatatgtgatcggagaggaggaaaatccaacagtcgggctggactat
gagtatgtgtacaaggattatcatgagggttcggagagtacacacctgggtccagtcctc
tctgccgagactcctgagagtggaggtgctatcagtggtccccgcgggctgaaaggagaa
aaaggtgaagccgctcacatggagtcgggttcgttggtggaaggcccaccaggagcagaa
gggcctgcgggtcacaccggtccccctggaatacagggtcatcctggacccgttggtgaa
cctggagagcggggtcccccgggcagacacggcctcgcgggcgccaatggattaccagga
cagcccggcagctccgttatgcttcctttccggtttggagccagtggtggtgacaaggga
ccaatagtttctgcacaagaagctcaggcggcagccatcctccagcaggcccggttggct
ctgcgtgggcctgcgggaccaatgggttatacgggacgatctggacccctgggaccacca
ggaaataatggattaaagggcgaacaaggcgatataggtcctcagggtcaaagaggacct
caggggctgtctggacctcctggaaaagccggtagaaggggtcgttccggtgctgacggg
gctcgtggtctgcctggtgaatttggtaataagggcgaacgtggctttgacgggcttccg
ggattgccaggtgaaaaaggtcatcggggggatggtggaagccagggacctttgggacca
cccggagaagacggagagagaggaagcgatggagatgttggaccccgtggacttcccggt
gaaccaggtgtcagaggtttgcttggacccaaaggccctcctggtgttcctggccctccg
ggagtcagaggtatggatggaaatgtggggccaaaaggaaacttgggtccacaaggtgag
cctggccctccaggacagcagggaacttctgggacacaggggctttcagggcctcaggga
gctcagggacccccaggagagactggaccaactggaaaacccggcctccctggcatcccc
ggctcagatgggcctcctggtcatcctggtaaagaaggtcctggaggatttaagggcaac
cacggtccttctggtccacaaggtccaatcggttatcctggaccccgcggtgtgaaggga
gttgatggaatcaggggtctgaaaggacacaagggagaaaagggtgaagacggtttccct
ggattcaaaggcgactttggtgtgaagggtgacaagggtgaaattggagttcctgggtca
agaggagaagatggacctgagggttcaaagggaagatctggccctcctggtgaccctgga
ccccttggattgattggtgagaagggtaaacttggtgtcccaggcctgcccggatatcct
ggacgacaggggacgaagggatctcttggcttcccaggattcccaggggccaacggagag
aagggagcgcggggtctttctggaaaatcaggccctaggggagagagaggaccctcaggt
ccaagaggtcaaagaggcccccgaggagccacagggaaatcaggaccaaagggaacatct
ggaggagatggtccttctggcccatcaggagagagaggtcttcctggaccacaaggatct
aatgggttccctgggcctaaaggacctcctggacccccaggaaaggatgggatcccagga
catcccggacagaggggagaagtgggtttccaaggtaaaatgggaactactggacctcct
ggagttgtaggaccacagggtgctcaaggtgaatctggtcaaatgggagagagaggacac
ccgggtcccccaggacctccaggagagcagggcttgtccggtgcatctggtaaagaggga
actaagggagatcctggcggtgttggtgtccctggaaaggatggccctgctggtctgaga
ggattccctggagagagaggcctgcccggtactccgggtggtccaggcctgaagggtaat
gaaggtccagccggtcccgctggtcccgcaggatctcctggagagagaggtggaccaggc
caaggtggaccaattgggcctccaggaagaccgggccctcaaggaccttcaggcgcttcc
ggagaaaagggtgttcccggggagaaaggtcccattggcccagcaggtagagatggggtg
cagggacctgtgggccttcctgggccggccggaactcctggaatctcaggggaggatgga
gataagggtgaggttggtgagcatggagcgaaaggagccaagggaaacaagggagaacat
ggtcctcctggtccgcccggtcctattggtcctttaggacaaccagggactccgggcgct
gatggagagcccggccctcgtggacagcagggaatctttggagcaaaaggagatgaaggc
acccgaggattccctggatctccaggacccattggactacaggggctgcccggcccgtct
ggcgagaagggagaaacaggagacgtgggccctatgggcccaccaggaccccccgggcct
cgcggacctgcaggacctaacggagctgatggacctcaaggtcctcctggtggaatagga
aacttgggacccccaggagagaagggagaacctggtgagaccggtgttcctggtgtccaa
ggagaatccggacctaagggacctcgtggagacagaggagaaaagggagagtctgggcaa
ccaggtgaccccggacccccaggaggaaagggacccactggtgatgatggacctaaagga
aacccgggtcctgttggattccctggagatcctggccctcctggagagatgggacccaga
ggacaagatggagcaaagggcgaacgaggagaagatggcgaacaaggagaggcaggatct
cctggtcctactggagagaacggacccccaggagcattggggaaacgaggtccggcgggt
ccatctggtcctgaaggtcgtcagggagagaagggagcaaagggagaggccgggtctgtg
ggtcctcctggtaagacgggagctgtgggacctcaaggaactcaaggaaagcaagggcca
gacggtctcagaggcatcccaggagccgtgggtgaacaaggtcgccctggagcaacaggc
caagcgggaccccccggacctgtgggtcctcccggattacctgggctcaaaggcgataat
ggtgctaaaggagagaagggtcatccaggtcttatcggcctcatcggaccaactggagag
cagggcgagaaaggtgacagaggtctgccgggtccacagggcaaaagtggtcagaaagga
gaacctggtattgctggtgtcacgggtcctatcggccccggaggatcagctggacagcct
gggtccccaggtcctaagggagcaaaaggagccacgggacaagctggacccaaaggacag
aagggagtacaaggtccccccggagctccgggacctccaggagaagtcatccagccactg
cctttccagatgcccaagaaaaataaacgctccattgatgcaagtcagatcatggcagat
gaacccaccggggactatgccgatggcatggaagaaatctatggctccctcaatgctata
aagaaagatattgagttaatgaagacaccattgggcacaaaggaacacccggcccgcacg
tgcctggacctgcgactgtgccacccagagcttccagatggtgaatattggattgatcca
aaccagggctgcactcgagactccttcaaggtcttctgtaacttttcttccggtgcagag
tcatgtatctatcccagcaaggacattgagaaggttaagatgtctttgtggaacacagag
aagagagagacctggtacagcaagttcaggagcggccgtaagttctcttatgttgattcg
gacgaaaaccccattggcgtggtccagctgaccttcctccgcctgctgagtgttggtgcc
cgtcagaacttcacgtatcactgccatcgctctgctggctggcacatggcctccaccgac
agctaccagaaagcactgcacttcatgggcgccaacgatgaggacctttccttccacaca
agtccttacatcaaggctctcagagatggctgttcgatgaggaaaggcaccgacaagact
gtgctagagattcacaccccacgtgtagagcagcttccattgacggacgctatgtttatg
gactttggagaacccaaccagaaatttggatttgaagtgggacctgtatgttttatgggc
tga
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