Dendrobates tinctorius (dyeing poison frog): 141077367
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Entry
141077367 CDS
T11000
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Pathway
dtc03020
RNA polymerase
dtc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
141077367 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
141077367 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dtc03021
]
141077367 (POLR2A)
03400 DNA repair and recombination proteins [BR:
dtc03400
]
141077367 (POLR2A)
Enzymes [BR:
dtc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
141077367 (POLR2A)
Transcription machinery [BR:
dtc03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
141077367 (POLR2A)
DNA repair and recombination proteins [BR:
dtc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
141077367 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
141077367
NCBI-ProteinID:
XP_073420364
LinkDB
All DBs
Position
Unknown
AA seq
1968 aa
AA seq
DB search
MHGPPAGDSACPLRIIKRVQFGVLGPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDPRQ
GVVERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVDAN
NPKIKDILTKSKGQPKKRLTHVYELCKGKNICEGGEEMDNKFGMDQNEGDEDIQKEKGHG
GCGRYQPRIRRTGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRITDEECFILGMEPRY
ARPEWLIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAAHV
IADDVKLLQFHVATMIDNELPGLPRAMQKSGRPLKSVKQRLKGKEGRVRGNLMGKRVDFS
ARTVITPDPNLSIDQVGVPRSIAANMTFPEIVTPFNIDRLQELVRRGNSQYPGAKYIIRD
NGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTF
RLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTL
TAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIVPGHINV
IRTHSTHPDDEDSGPYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMGH
DVTRLFYSNIQTVINNWLLIEGHTIGIGDSIADAKTYQDIQNTIKKAKQDVIEVIEKAHN
NELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKINIS
QVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMG
GREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGEGVE
FQNLATLKPSNKAFEKKFKFDYANERALRRTLQEDVVKDILSNAHIQNELEKEFDKMKED
REVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINTRMPSDLHPIKVVDGVKDLSKKLVI
VNGDDPLSRQAQENATLLFNIHLRSTLCSRRMVEEFRLSGEAFDWLLGEIESKFNQAIAH
PGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVF
LLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQNTVVAEDQEWVNVYYEMPDF
DVTRISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIM
NSEENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKIIL
TEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALEREL
YHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLMEA
AAHGETDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKFGMEIPTNIPGLGAAGPTGMF
FGTAPSPMGGMSPAMTPWNQGATPAYGAWSPSLGSGMTPGAAGFSPSAASDASGFSPGYS
PAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSY
SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
PTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP
SYSPSSPRYTPQSPSYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSP
TSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPK
YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atgcacggaccgccggccggtgacagcgcctgcccgctccggatcattaagcgagtccag
ttcggtgtgttgggcccggacgagctgaagcggatgtcggtgactgagggtggaattaag
taccctgagaccacagagggtggtcgccccaagttgggtggtttgatggaccctcgtcag
ggtgtggttgagcgcaccggccgctgtcagacatgtgcgggtaacatgacggagtgcccg
ggccactttgggcatattgaactggctaagccggtctttcatgtgggatttctggtgaag
accatgaaggttttgcgttgcgtctgtttcttctgctccaagttactggtggatgcgaat
aacccaaaaataaaagatattttgacaaaatctaaaggacaaccaaagaagcgtctgacc
cacgtgtacgagctgtgcaagggcaaaaacatctgtgaggggggcgaggagatggacaac
aagtttgggatggatcagaatgaaggggatgaagacattcagaaagagaagggccacggt
ggctgtggtcgctatcagccaaggatcagacgtacaggcctggagctatacgcagagtgg
aagcatgtgaacgaggactcgcaggaaaagaagatcctgctgagtcctgagcgggtccat
gagatattcaagcgcatcacagatgaggagtgcttcatcctgggaatggagccgcgatat
gcacgccccgagtggctgattgtcaccgttctgccagtacctcccctgtctgtgcggccc
gcagtcgtcatgcaagggtcggccaggaaccaggatgatctgacccacaaacttgctgat
attgtcaaaattaacaaccagctgaggcggaacgagcagaatggtgctgcagcccacgta
attgccgacgacgtgaagctcctgcaattccatgttgccacaatgatagacaatgagcta
cctggccttcctagggccatgcagaagtctggccgtcctctgaagtctgtgaagcagaga
ttgaaggggaaggaagggagagtccgaggaaacttgatgggaaaacgtgtcgacttttct
gctcgaacagttatcacccctgatcccaacctctccattgaccaagttggagtcccgagg
tcgattgctgcgaatatgacttttccagagatcgttactcccttcaacattgataggctg
caggagctggtgagacgaggaaacagtcagtaccctggagccaaatacatcattcgagat
aatggggatcgcattgatctcagatttcaccctaaacccagcgacctgcatttacagatt
ggctacaaggtggagagacacatgtgcgatggggatattgtcatctttaacagacagcca
acgctacacaaaatgtctatgatggggcacagagtccgcattcttccctggtccaccttc
cggctgaacctcagtgtcacgactccatacaacgctgactttgacggggacgagatgaat
ttgcatcttccacagtctctggagacgcgggcagagatccaggagcttgccatggtacct
cgtatgatcgtcacacctcagtccaacagaccagttatgggaattgtacaggacacgctg
actgcagttaggaaattcacaaaaagggacgttttcctggaaaggggggaggtgatgaat
ttgctgatgtttctctccacatgggatgggaaggttcctcagccagccatcctgaagcct
cgtcctctctggaccgggaagcagattttctctttgattgttccagggcatattaatgtt
atccggactcacagcacccacccggatgatgaggacagtggtccttataaacacatctcc
ccgggggacacaaaggtcattgtggagaatggagagctgatcatggggatcttgtgtaaa
aaatcgctggggacgtctgcgggatcgctggtccatatctcgtatttggagatgggacat
gatgtcactcgtctcttctactcaaatatccagactgtcatcaataactggctgctcatt
gagggtcacactattgggatcggagactctattgctgatgcaaagacttaccaggatatc
cagaacaccatcaaaaaagccaagcaggatgtgatagaggtcattgagaaggcccacaac
aatgagctggagcccacacctggaaacaccctacgtcagacttttgagaaccaggtgaac
cgaatcctcaatgatgccagagataagactggctcgtctgcccagaagtctttatctgag
tataacaacttcaagtccatggtggtgtcaggagccaagggctcaaagatcaacatctcc
caggtcattgctgtagtgggccagcagaacgtggagggtaaacgcatcccctttggcttc
aaacatcggacactgcctcacttcatcaaagatgattatggcccagagagcagaggtttc
gttgagaactcctaccttgctggccttactccaacagagtttttcttccatgctatggga
ggaagagagggtttaattgatacagctgtgaagactgctgagacaggttacatccagaga
cgtctgatcaagtctatggagtctgttatggtgaagtacgacgctacagtacgtaactcc
atcaatcaggttgtacagttgcggtatggcgaggatggtctggctggagaaggtgtggag
ttccagaacctggccacgcttaaaccatctaacaaagcctttgagaaaaaatttaaattc
gactacgctaatgagcgtgctctgaggaggactctgcaggaagatgtggtgaaggatatc
ctcagcaatgcccacatccagaatgagctggagaaggaatttgacaagatgaaggaagat
agagaggtcctgcgggttatcttccctactggtgacagcaaggtggtcctaccgtgtaat
ctcctcaggatgatctggaacgcacagaagatattccacataaacacccgcatgccctca
gatctgcacccaatcaaagtggtggatggcgtgaaggatctgagtaagaagctggtgatt
gtaaatggagatgatcctctgagtcgccaggcccaggagaacgccactctcctgtttaac
atccacctgcgctccacgctttgcagtcgcaggatggtggaggagttccggctcagtgga
gaggccttcgactggctgctgggagaaatcgagtccaagttcaaccaggctattgctcat
ccgggagagatggtgggagcactggccgctcagtctcttggtgagccagccactcagatg
accttgaacactttccactatgccggtgtctcagccaaaaacgtcactctgggagttcct
cgtctgaaagagttaattaatatatcaaagaaacctaagactccttccctcacagtcttc
ttactgggccaatctgctcgagatgccgagcgtgccaaggacattttgtgccgcttggag
cacacaactctgcggaaagttacggctaatactgccatttactatgatccaaacccacaa
aataccgtggtggctgaagaccaggagtgggtgaatgtctactacgagatgccagacttt
gatgtcaccagaatttccccatggctgcttcgtgtggagcttgaccgcaaacacatgact
gaccgtaaactgaccatggagcagatcgcggagaagatcaatgcaggctttggcgatgat
ctcaactgtatatttaatgatgataatgcggagaagctggttctgcggataaggatcatg
aacagtgaggagaacaagatgcaagaggaagaagaggtggtggacaagatggacgacgat
gtcttcttacgttgcattgagtccaatatgctgacagatatgactctgcaggggattgag
cagatcagtaaggtttacatgcacctgccacagactgacaacaaaaagaagataattctg
acggaggatggggagttcaaggctcttcaggaatggatcctggagacagacggcgtcagc
ctcatgagggttctgagtgaaaaagatgtggatcctgtgaggacgacatcgaacgacatc
gtggaaatcttcactgttcttggaattgaagccgtcaggaaagcgctggagagagaactg
taccatgtaatttcctttgacggttcttacgtgaactatcgccacttggcccttctctgt
gacacaatgacctgcagaggccacttgatggccatcactcgtcacggtgtgaacaggcaa
gacacaggaccgctcatgaaatgttcctttgaagaaacggtggatgtcctcatggaggcg
gcagcacacggtgagactgatcccatgaaaggagtgtctgagaacatcatgctggggcag
ttggcacccgctggcactggctgctttgatctcttattggatgcagagaaatgtaaattt
ggaatggagattcctacaaatatcccgggtcttggagccgcaggaccaaccggaatgttt
tttggaactgccccaagcccgatggggggaatgtctcctgcaatgactccttggaaccaa
ggtgctacaccagcctatggagcatggtctccaagtctaggaagtggcatgacacctggc
gcagccggattctctcccagcgctgcctcggatgccagtggcttcagtcctggctattct
ccggcctggtctcccactccaggttctcctggttctccgggcccctcaagtccgtacatt
ccttcaccaggtggcgcaatgtctcccagctattcccccacctctccagcttatgaacca
aggagtcctggcggctatactcctcaaagtccaagttactctccgacgtcaccctcttac
agtccaacttccccctcatattctcccacaagcccaaactatagtcccacttccccgagc
tactctcccacttctccgagctactcgccaacaagtccaagctactcgccaacctctccg
agttatagcccaacgagccccagctacagtcccacttccccaagctattctcctacatcc
ccaagctattctcctacatcccccagctacagtcctacatctcccagctactctcctact
tctcccagttactctcctacatctcccagttattctcccactagtcctagttactcgccc
acttctcccagctattctcctacatctccctcatacagcccaacttcaccctcctattca
cctacatccccatcatacagcccaacatcaccctcttattctcctacttctcccaattac
tcaccaacttctcctaattatacacccacctctccgagttacagtcccacctctcccagt
tacagtcccacctctccaaactatagtcctacaagcccgagttattctccaacatcgccc
agttactcgccttcaagtccacgttataccccacagtctccgagctatactcctagctcc
cccagctacagccccagttcacccagctattccccaacaagccccaaatatacaccgaca
agcccgtcctacagcccaagctctccagagtacacgccgacttcccccaagtattctccg
acttcccccaaatactcgccaacttctcccaagtactcgccaacatcccctacttattct
ccaaccactcccaaatactctcctacctctccaacatattcccctacttccccagtctat
actcctacatcccccaaatactctcctacatcgcctacatattcaccgacctctcctaag
tattcgccaacttcacccacctactcacctaccagtcctaaaggctccacttactctcct
acgtccccaggatacagtcccacatctccaacctacagtctcacaagtccagcgatcagt
ccagatgacagtgatgaagaaaactga
DBGET
integrated database retrieval system
