Dendrobates tinctorius (dyeing poison frog): 141077416
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Entry
141077416 CDS
T11000
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Pathway
dtc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141077416 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dtc03021
]
141077416 (SF3B3)
03041 Spliceosome [BR:
dtc03041
]
141077416 (SF3B3)
03036 Chromosome and associated proteins [BR:
dtc03036
]
141077416 (SF3B3)
Transcription machinery [BR:
dtc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
141077416 (SF3B3)
Spliceosome [BR:
dtc03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
141077416 (SF3B3)
Complex B
141077416 (SF3B3)
Complex C
U2 SnRNP specific factors
141077416 (SF3B3)
Chromosome and associated proteins [BR:
dtc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
141077416 (SF3B3)
TFTC complex
141077416 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
141077416
NCBI-ProteinID:
XP_073420433
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKLQEIVVSRGKILELLRPDANTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIIILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVASAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQDSLSPIMCCQIADLASEDT
PQLYVASGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKIIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPEALCIVEMGGAERQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFNNTG
DDWYVLVGVAKDLILNPRSVAGGLVYTYKLVNSGEKLEFMHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANFIVGIQTIGQRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTNSSLLDYDTVAGADKFGNICVVRLPPNINDDVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPICGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPMKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctttataacctgaccctgcagagagccaccggcatcagcttcgccatccatggg
aacttttcaggaactaaactccaggagatcgttgtttcccgggggaagatcctggagctg
ctgcgccctgatgccaacacgggcaaggtgcacacgctgctgacggtggaggtgttcgga
gtcatccgctcgctcatggctttccgtctgaccggcggcaccaaggattacatagtggtg
ggcagcgactccggccgcatcatcatcctggagtaccacccttccaagaacatgtttgag
aagatccaccaggagacgttcgggaagagtggctgccgcaggattgtgcccgggcagttc
ttggcagtggaccccaagggcagagctgtgatgataagtgccatagagaagcagaagctg
gtttacatcctgaacagagacgccgctgctcggcttaccatctcctccccgctggaggct
cacaaggccaacaccctggtgtaccacgtggtgggggtggacgtcggctttgagaacccc
atgtttgcctgcctggagatggactatgaggaggccgataatgaccctacgggggaagcg
gccgccaacacccagcagacactgaccttctacgagctggatctgggtctgaatcacgtg
gtgcggaagtacagcgagccgctggaggagcatggcaacttcctcatcacagttcctggc
ggctcggacggccccagcggcgtgctgatctgctctgaaaactacatcacatacaagaac
tttggtgatcagccggacatccgctgtcccatcccgaggaggaggaacgacctggacgac
cccgagcgagggatgatcttcgtctgctccgccacgcacaaaaccaaatccatgttcttc
ttcctggcgcagacggagcagggagacatctttaagatcacgctggagacagacgaggac
atggtcacagaaatccggctgaaatactttgacaccgttccagtggcgtcagcgatgtgc
gtcctgaagaccggcttcctttttgtggcttcagagtttgggaaccattacctgtaccag
atcgctcacctgggggatgacgatgaggagccagagttctcctctgccatgcccctagag
gagggggacactttcttcttccagccgcgtcctctgaagaacctggtgttggtggatgag
caggacagtctgtccccgatcatgtgctgccagattgctgacttggccagtgaggacact
cctcagctgtacgtggcgagtggccgggggccgcgctcctctctcagggtcttgagacac
ggactggaggtctctgaaatggctgtctcagagctgcccggtaaccccaatgctgtgtgg
acggtgcggagacatattgaagatgagtatgacgcctacatcattgtgtccttcgtgaac
gccaccctggtattgtctatcggggagactgtagaagaagtgacggattctggctttctg
ggaacgacccccaccctgtcctgctctctgctgggtgaggacgccttggtccaggtctat
cccgatgggatccgccacattcgagcagacaagagggtgaacgagtggaagacgccgggg
aagaagattattgtgaagtgtgcggtgaaccagcggcaggtggtgatcgctctgacgggg
ggcgagctggtctacttcgagatggacccttcaggacagctaaacgagtacacggagagg
aaggagatgtctgcggatgtggtgtgcatgagcctggccaacgtaccccctggggagcag
cgttcccgcttcttggccgtggggctggtggataatactgtccggatcatctctttggac
ccgtcggactgtctgcagccgctcagtatgcaggcgctccccgcacagcccgaggccctg
tgcatcgtggagatggggggtgcggagcggcaggacgagctcggggagcgcggctccatt
ggattcctctatctcaacattgggctgcagaacggagtgctgctccggaccgtgttggat
cccgtgaccggcgacctgtctgataccagaactcgttatctcgggtcccgtccggtcaag
ttgtttcgtgtgaggatgcaaggacaagaggctgtcctggccatgtccagccgttcgtgg
ctcagttattcctaccagtctcgtttccacctcacccccctctcgtatgagaccctggag
tacgcgtccggctttgcctccgagcagtgtccagagggcatcgtggccatatccaccaac
accctgaggattttggcgctggagaagttgggtgcggtgtttaaccaggtggcgttccct
cttcagtacacgccacgaaagtttgtgatccatcctgagagtaacaacctgattatcata
gagacggaccacaacgcctacacggaggccaccaaggcccagcgcaagcagcagatggcc
gaggaaatggtagaagctgccggagaggacgagcgagagctggctgcggagatggcggct
gctttcctcaatgagaacctgccagagtccatctttggagcaccgaaagctgggaatggt
cagtgggcgtctgtgatccgggtgatgaaccccatccaggggaacacgctggacctggtg
cagctggagcagaacgaggccgcgttcagtgtggcagtgtgccgcttcaacaacactgga
gatgactggtacgtcctggtcggcgtagccaaggaccttatcctgaacccccgctccgtg
gctggaggactggtgtatacgtacaagctggtgaacagtggcgagaagctggagtttatg
cacaagacccccgtagaggaagttccagccgccatcgctcctttccaaggtcgcgtcttg
ataggagttgggaaactgctgagagtttatgatttggggaagaagaagctcctgaggaaa
tgtgaaaacaagcacatcgccaacttcattgtgggcatccagaccatcgggcagcgcgtc
atcgtgtccgacgtgcaggaaagcttcatctgggtgcgctacaagcgcaatgagaaccag
ctgatcatttttgctgacgacacgtatcctcgctgggtcaccaactcttcgctgctggac
tacgacacggttgctggcgccgacaagtttggaaacatctgtgtggtccggctgcccccc
aatataaatgatgatgttgatgaagatccgactggtaacaaggcgttgtgggacaggggg
ctgctgaacggggcctctcagaaggcagaggtgataatgaactatcacgtgggcgagacg
gtgctgtcactgcagaagacgacgctcatccccgggggctcggagtccctggtctacacc
accttatccgggggcatcggcatccttgtcccatttacttcccatgaggatcatgatttc
ttccagcatgtagagatgcacctgcgctcagagcatccccccatctgtgggcgagaccac
ctcagcttccgctcctattacttcccggtgaagaatgtgattgatggagacttgtgtgaa
cagttcaactccatggagcccatgaagcagaagagcgtggccgaggagctggaccgaacg
cctcccgaggtctccaagaagctggaggacatccgtactcgctacgccttctaa
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integrated database retrieval system
