Dendrobates tinctorius (dyeing poison frog): 141080452
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Entry
141080452 CDS
T11000
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Pathway
dtc03030
DNA replication
dtc03420
Nucleotide excision repair
dtc03430
Mismatch repair
dtc03440
Homologous recombination
dtc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
141080452 (RPA1)
03420 Nucleotide excision repair
141080452 (RPA1)
03430 Mismatch repair
141080452 (RPA1)
03440 Homologous recombination
141080452 (RPA1)
03460 Fanconi anemia pathway
141080452 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dtc03000
]
141080452 (RPA1)
03032 DNA replication proteins [BR:
dtc03032
]
141080452 (RPA1)
03400 DNA repair and recombination proteins [BR:
dtc03400
]
141080452 (RPA1)
Transcription factors [BR:
dtc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
141080452 (RPA1)
DNA replication proteins [BR:
dtc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
141080452 (RPA1)
DNA repair and recombination proteins [BR:
dtc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
141080452 (RPA1)
MMR (mismatch excision repair)
141080452 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
141080452 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
IBR
Motif
Other DBs
NCBI-GeneID:
141080452
NCBI-ProteinID:
XP_073421783
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MALPQLSEGAIAAILQGDASSKPVLQVINTRPISTANGPPRYRLLMSDGLNTLSSFMLAT
QLNSLVDDNLLAANCICQVSRYIVNNLKDGRRVIIIMEMNVLKPADSVYGKIGNPQPYND
GQGAPQPAAPAPAPPPPSKPAQNSAPPFSMNRGLSKPFGGGGAPNTPGGTQSKVVPIASL
NPYQSKWMIRARVTNKGQIRTWSNSRGEGKLFSIEMVDESGEIRATAFNDQADKFFSLIE
VNKVYYFSKGTLKIANKQYTAVKNDYEMTFNSETTVIPCDDSSDVPTVQFQFVPISELEN
KNKDTLLDVIGVCKSFEEVAKVTIKSNNREVSKRTIHLMDTSGKMVSTTLWGDDADKFDG
SRQPVVAIKGARLSDFGGRSLSVLSSSTVMINPDIPEAFKLRGWFDSEGQVLEGASISES
RGGAGGGNTNWKSLLEVKNENLGHGEKADYFTSVATIVYLRKENCLYQACPSQDCNKKVI
DQQNGLFRCEKCDKEFPNFKYRLILSANIADFGENQWITCFQESAEAILGQNAAYLGELK
EKNEQAYEEVFQNANFRSYTFRIRVKLETYNDESRIKATSMDVKPVDHKEYSRRLIMNIR
KLASQGA
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcgctaccacagctcagcgagggcgccatagcggccatcttacaaggcgatgcctcg
tccaagccggtgctgcaggtcataaatacacgtccaatcagcactgctaatgggcctccg
cgttatcgactgctgatgagtgatggattaaatacgctttcctcttttatgttggcaacg
cagctgaactctcttgtggacgacaacctccttgcagctaactgcatctgtcaggtctcc
cggtatattgtgaacaacttgaaagatggaagacgagtgattataataatggaaatgaat
gtgctgaagccagcggattctgtctatggaaagattggaaatcctcaaccttacaatgat
ggtcaaggagctccccaacctgcagcgcctgctccagctccaccaccaccaagcaaacct
gcacaaaactctgctccacctttttctatgaacagaggactgtctaaaccattcggagga
gggggtgcaccgaatacacctggtggcactcagtctaaagtggtgccaattgccagtctg
aacccataccaatcaaagtggatgattcgagcgcgagtgaccaacaaaggccagatacgt
acttggagcaattctcgtggagaagggaaattattttccattgagatggtggatgagagt
ggtgagatccgggcaactgccttcaatgatcaagctgacaagtttttctctcttattgaa
gtgaataaggtatattacttctcaaaaggtacattgaagattgctaacaagcagtacacg
gctgtgaagaatgactatgagatgacatttaatagtgagaccaccgttatcccttgcgat
gactcttcagatgtccctacagtgcagtttcagtttgttcctatttctgagcttgaaaac
aagaataaagacacattattagatgtcataggagtttgtaagagttttgaagaggtcgct
aaggtcacaataaaatcaaacaaccgagaagtttcaaagagaacaatccatttaatggac
acatcgggcaagatggtttccacaactctgtggggagatgatgcggataaatttgatggc
tcaagacaacctgttgtagcgatcaaaggagcccggctttctgattttggggggcgatct
ctgtcggttttatcatccagtacggtcatgataaatccagatattccagaagcattcaag
ctcagaggatggtttgactctgagggtcaggtacttgaaggcgcctctatttctgagtct
cgcggaggagctggaggagggaatacaaactggaagtctttgttggaggtgaaaaatgaa
aacctgggccacggagaaaaagcagattatttcaccagcgtggcgacaattgtctatcta
cggaaagagaactgcctgtatcaggcctgcccttctcaagactgcaataaaaaggtgatt
gaccagcagaatggacttttccgctgtgagaagtgtgacaaagagtttcccaacttcaag
tatcgtctcatcttatcggcaaatattgctgatttcggagaaaatcagtggattacttgt
tttcaagaatcagctgaagccattctaggccaaaatgctgcttatcttggagaactcaag
gaaaagaatgagcaggcatacgaggaggtatttcagaatgccaacttccgatcctacacc
ttcagaattcgagtcaagttggagacgtacaatgatgaatcccgtatcaaggctacatcc
atggatgtgaaaccagttgatcacaaagaatactcaagacgtcttatcatgaatatccgg
aaactggcctcgcaaggagcctga
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integrated database retrieval system
