Dendrobates tinctorius (dyeing poison frog): 141083329
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Entry
141083329 CDS
T11000
Symbol
CNOT4
Name
(RefSeq) CCR4-NOT transcription complex subunit 4 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Pathway
dtc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141083329 (CNOT4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dtc03000
]
141083329 (CNOT4)
03019 Messenger RNA biogenesis [BR:
dtc03019
]
141083329 (CNOT4)
04121 Ubiquitin system [BR:
dtc04121
]
141083329 (CNOT4)
Enzymes [BR:
dtc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141083329 (CNOT4)
Transcription factors [BR:
dtc03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
141083329 (CNOT4)
Messenger RNA biogenesis [BR:
dtc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141083329 (CNOT4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
141083329 (CNOT4)
Ubiquitin system [BR:
dtc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141083329 (CNOT4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-UDP
zf-C3HC4_2
zf-RING_2
DZR_2
Nup35_RRM_2
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
141083329
NCBI-ProteinID:
XP_073423619
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MSRSPEVKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKLNPNFLQLSTTGTVDKNKNKVTPLQRSDVPNSNNKDAWPSLQSSGRSSNGLTLE
HRKSPPILDNGLDPDHLTPDGPDSDFGDFASISFPGGWTYASNRLLWESAEHNVSKFGRV
MEDDTSSVDKSSESLSIGNGDNLQQILPSDTPSPPPGLSKPNPTVPISPANHSARSPFED
TMTESQSLFSDNFRHPNPIPSGLPTFPSSPQTSSEWPTAPEPQSLFTSETIPVSSSTDWQ
AAFGFGSSKQQEDDLGFDPFDITRKALADLIEKELSVQDQPALSPTSLQNPSPHSTAKGP
GSGFLHPTAVTNANSISSTFPVLPQRFPPFQHRAVYNSFSFPGQAARYPWMAFPRNNLMH
LNHTANPTPNSNFMDLSHPSQHNTGLGGIPISDHSNSVESINVKEWQDGLRALLPNININ
FGGLQNASSPSNATHSAPTSSHATPNSLNWDCPSSWMDPAIITGIPSSTGNGLEPLQDDN
PPHWLKSLQALTEMDGPSSSIPPHHPHNNLFSTQIPLHRANWSPYPPPTNPASFHSPPPG
FQTAFRPPNKTTTDLLQSSALDRH
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcagccccgaggtgaaggaggaccccgtggaatgccccctttgcatggagcct
ttggaaatcgacgacatcaattttttcccttgcacgtgcggatatcagatttgccgcttc
tgctggcaccgtatacgcacagacgagaacgggctctgtcctgcgtgcagaaagccatat
ccagaagaccccgccgtctacaaacctctctcccaggaagaactacagaggataaagaac
gaaaagaaacaaaaacagaacgagcgcaaacagaaaatatcagaaaaccgcaaacacttg
gccagtgtccgcgtggtgcagaaaaacttagtctttgtagtcggcctttcacaacgtctc
gcagacccagaggttttaaaacggccggaatatttcgggaagttcggtaaaatacacaaa
gtcgtcatcaacaacagcacgtcctatgcaggctcacagggtccaagtgccagtgcgtat
gtaacgtacatccggtcagaagacgcacttagagcgatacaatgcgtcaacaacgtggtg
gtcgacggcagaacgctcaaggcatctttaggcaccacaaaatactgcagttacttctta
aaaaacatgcagtgtccaaagccagactgtatgtatctgcacgagctgggggacgaggcg
gccagctttacaaaagaagagatgcaggcgggtaaacatcaggaatacgagcagaagttg
cttcaggaactctacaaactaaatccgaacttcttacagttgtctactacgggtacagtc
gacaagaacaaaaacaaagtaacgcccctgcagaggtccgatgtacccaacagtaataac
aaagatgcgtggccatcattacagagctcgggccgatccagcaatggtttaacactggaa
cacaggaaatcgcctcccatattagacaatggcttagatccagaccatttgactccagac
gggccagactcagactttggtgactttgcttctatatcgttccctggggggtggacatat
gccagtaataggctgttgtgggaatccgcagagcataatgtttccaaatttggcagggtc
atggaggatgatacaagttctgtcgacaaatcatcagagtcattgagtatagggaacggc
gataaccttcaacagatattaccaagtgacaccccatcacctccgccaggtttgtcaaaa
cccaaccccaccgtccccatcagtccagccaatcacagtgcgaggtctcctttcgaagac
accatgacagaatcgcaatctcttttctcggacaacttcaggcatccaaaccccatcccc
agtggtctcccgacgtttcctagttccccacagacatccagtgaatggcccacagctcca
gaaccacaaagtcttttcacatcagaaacgatcccggtttcctcatctacagactggcaa
gctgcatttggctttggctcttctaaacagcaagaggacgacctaggttttgacccgttc
gatatcacccgcaaagccttagcagacttgatcgagaaagaactttctgtgcaggaccag
cctgcgttgtcccccacgtctcttcagaacccttctccccacagtactgccaaagggcca
ggatctggcttcctccacccgaccgcagtcaccaatgccaactctatctctagcaccttt
cctgtcttgccacagcggttcccaccctttcaacacagagcagtttataactcgttcagt
ttcccgggccaggcagcacggtatccgtggatggcctttccacgcaataacctcatgcac
ttgaaccacacggcaaacccgacgcccaacagtaacttcatggacttgagtcacccttca
caacacaatacaggcctaggagggattcccatttcagaccacagcaattcagtagagagt
ataaatgtgaaggaatggcaggacgggctaagggcgcttctgcccaacataaacatcaac
tttggtgggctgcaaaatgcttcttccccttcaaacgccacccacagcgcaccaacgtcc
agccatgccacacctaacagcctgaactgggactgcccgagcagctggatggatcccgcc
attatcacaggtatcccatcatccaccgggaatggtttagaacctctgcaagatgacaat
ccgccacactggttaaaatcactacaagccctgacagagatggatggccccagcagctct
atacctccccaccacccccataacaatctcttcagcacacagatccccctccacagagca
aattggagcccctacccacccccgacaaaccctgccagtttccactcccctcccccaggc
ttccagacagccttcagacccccaaacaaaaccaccacagatctactacagagctcagcc
ctggaccgccattga
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