Dendrobates tinctorius (dyeing poison frog): 141084636
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Entry
141084636 CDS
T11000
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Pathway
dtc03440
Homologous recombination
dtc03450
Non-homologous end-joining
dtc04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
141084636 (RAD50)
03450 Non-homologous end-joining
141084636 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
141084636 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dtc03032
]
141084636 (RAD50)
03400 DNA repair and recombination proteins [BR:
dtc03400
]
141084636 (RAD50)
DNA replication proteins [BR:
dtc03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
141084636 (RAD50)
DNA repair and recombination proteins [BR:
dtc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
141084636 (RAD50)
BRCA1-C complex
141084636 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
141084636 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
ABC_tran
AAA_29
AAA_13
AAA_16
Motif
Other DBs
NCBI-GeneID:
141084636
NCBI-ProteinID:
XP_073425587
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSKIEKMSILGVRSFGVEDKDKQVITFFTPLTILVGPNGAGKTTIIECLKYITTGDFPPG
SKGNTFVHDPKVAHETDVRAQIRLQLRDMNGELVAAQRSMVCTQKGKKTEFKTLEGVITR
MKHGEKVSLSTKCAEMDKEMISALGVSTAVLNNVIFCHQEDSNWPLSEGRQLKIKFDEIF
SATRYIKALETLRQVRLKQAQRVKECQAELKYLKQNKEKAQEIRDHLHSKETQLAASREN
VKSIDNQLEPLKSNLSDIQRNLSKVMKFDNDIKSLESRKRTMEKDNQDLEEKIEKVFQGS
DEELNEMYQNHQRTVKEKERKLNDYQRENDRLVKDYQRFNREKGELLVQQGRLQMEADQH
QQQIRSRDSLIKALALQLEFDGFEHTPLNSRQITSFQRLMKDRQEKDEADVNQTMKEFSD
KERMKQRQIDEIRDKKTGLERTIELKITMQTKKQTDLKSIKLELQQLEGSSDRLQELDEE
LVKTVRELESAESSCNVEALKTEVLQLQNQRSELDRTVRKLDQEMEQMNMHTMTRTQMDM
LKKDKAEKDEHIRKIKSRHSDELTSLLGYFPSKKQLEDWLYGKHKDINQTRDKLARITKE
LVSAEQNKNHMSNELRKKEEQCTSYEDKVFNVCGSQDFDSDLTRLQDDIEKTSKQRAMLA
GATAVYTQFITQLTEENQPCCPVCQRIFPSEAELQDVINDMQSKLRLVPDKLKTTETELK
RREKRKDEMMELKPMRQMLNELKEKDIPELRNKLASINREIQRLKNDVEEQETLIATFMS
EEESAKACLQDISLMERYQMELRDVERKIAQHATKLHGVDLSRTVQQVNQEKQEKQHNLD
NVSGKIELLRKRIQDQQDHVQQLKSSANELKAEKLNISSKLQRRQQLEDQNVELTTELQC
LSREIKEAKEQVFPLETTLEKLQQEKQEILERKESSHRAAQERLIDLKEKVKKVTLLMKE
IEKYIHDGREEFKEQKDAELQDLISRLNDCEKKKENINKEMITVRQDIDTQKIQERCLQD
NLTLRKRKEELKKVDEERNRLLREMGQMNVMQLRNEHEALEGKIETLKTSHSLALGRQKG
YEDEIIRFKKELREPQYKDAEEKHREMMIVMRTTELANKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADETVSAADKRRTYNYRVVMIKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQR
NFQLLVITHDEDFVELLGRSEYVEHFYRIKKNMDQCSEIMKCSINSLGNYVY
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaatagagaaaatgagcatccttggtgtgaggagtttcggggtggaagataaa
gataaacaagttataaccttcttcactccactgacaattttagtaggaccaaatggagcc
ggaaaaactaccattattgagtgtctcaagtatattacaacaggagattttccacctgga
tcaaaagggaatacctttgtgcatgatcctaaggttgctcatgaaacagatgtcagagcc
cagattcgtttacagctacgggacatgaatggagaattagtagctgctcagaggtccatg
gtgtgtacacagaaggggaaaaagactgaatttaaaacactggaaggagtaattacaaga
atgaagcatggtgaaaaagtaagcttgagtacaaagtgcgcagagatggacaaagagatg
ataagtgccttaggagtgtccaccgctgtactcaacaacgtcatattctgtcaccaggaa
gactctaactggcctttaagtgaagggagacagctaaagataaagtttgatgagatcttt
tctgcaaccaggtacattaaagccctagaaactttgagacaagtgaggttaaaacaggcc
caacgtgtgaaagaatgtcaagctgaacttaagtatcttaaacagaacaaggagaaagcc
caggaaatccgagaccacctccatagtaaagaaacacagttggcagcttccagagaaaat
gtgaagtctattgataaccaactggagcctctcaaaagtaatctgtctgacattcagaga
aacctctcaaaagtaatgaagtttgacaacgacatcaaatctttggaaagccggaaaaga
actatggaaaaagataatcaagaccttgaggagaaaattgagaaggtcttccaaggaagt
gatgaggaactaaatgagatgtatcaaaatcatcagaggactgtgaaagagaaggagcga
aaactcaatgattaccaacgtgaaaatgatagattagttaaagactatcaaagatttaac
agagagaaaggagaacttctggtgcagcaaggacgtttgcaaatggaggctgaccaacat
caacaacagatcagatctcgagactcccttataaaggctttagccttgcaattagaattt
gatggatttgagcacactccattaaacagcagacagataactagcttccagaggctaatg
aaagacagacaagaaaaagatgaagcagatgttaatcaaacaatgaaagaattttcagat
aaggaaagaatgaagcagagacaaattgatgaaataagagacaagaagactggccttgaa
cgtacaattgagctgaaaattaccatgcaaaccaaaaaacaaactgatcttaagagcatt
aagttagagctccaacagctagaaggctcctcagacagattacaagaacttgatgaagaa
ctcgtaaagacggtacgtgagctggaaagtgcagaaagcagttgcaatgtggaagcccta
aaaacagaagtcttgcagctacagaatcagaggtctgagttggacagaactgtccggaag
ctggatcaggaaatggaacaaatgaacatgcatactatgactcgcacgcagatggatatg
ctgaagaaagataaggctgaaaaagatgaacatattcgaaaaataaagtctagacacagt
gatgagttaacatcactgttggggtattttccaagcaagaagcaacttgaagattggttg
tatggaaaacacaaggatattaatcagacacgggacaaactagccaggataacgaaggag
ctggtttcagctgaacagaataaaaatcatatgagcaatgaactacgaaaaaaagaagaa
cagtgtacatcatatgaagacaaagtctttaatgtgtgtggtagtcaagactttgacagt
gatttgactcgtctgcaggatgatatagaaaaaacctctaaacagcgggcgatgttggct
ggggcaactgcagtatacacacaattcatcactcagttgacagaggagaaccaaccttgc
tgtccagtttgccaaagaatctttccttcagaagctgagctgcaggatgtaattaatgac
atgcagtccaagcttaggctggttccagataaactgaagactacagaaaccgaactgaag
agaagagagaaaagaaaggatgagatgatggagctgaaaccaatgagacaaatgcttaat
gaacttaaggaaaaggacattccagaactaagaaacaagctggcgtcaataaatagggaa
attcaacgacttaaaaatgatgtggaagaacaggaaactcttattgcaacatttatgtct
gaagaggagagtgccaaggcctgtttgcaggacatttccctcatggaaagatatcagatg
gagttaagagatgtagaaaggaagatagcacagcatgccacgaaattgcatggagtagac
ctcagccgcactgtccaacaggtgaaccaggaaaaacaagaaaaacagcacaacttggac
aatgtttcaggtaaaattgagctgttgcgtaagcgaatacaggaccaacaagatcacgtc
cagcagctgaagagttcagccaatgaattaaaggcagaaaaacttaatatttctagtaag
cttcaacgtcgacaacaactggaggatcagaatgttgaactgaccactgagctgcagtgt
ttgtcaagagagataaaggaagccaaagaacaagttttcccattggaaacaacacttgaa
aaactacagcaagaaaagcaggaaattctggaaagaaaagaatccagccacagagcagca
caagaaaggctcattgaccttaaggaaaaggtgaaaaaagtcaccttgctaatgaaagaa
attgaaaaatacatacatgacggtcgagaagaattcaaggagcaaaaggatgctgaacta
caagacttaatttctcgacttaacgattgcgagaagaagaaagaaaatattaataaggag
atgatcaccgttagacaagatatagacacacaaaaaattcaggaaagatgtctccaagac
aacctaactcttagaaaaagaaaagaagagcttaagaaggttgacgaggaaagaaacaga
ctattaagagagatgggacagatgaatgttatgcaacttagaaatgagcatgaggcgttg
gaaggaaaaattgaaacattgaaaacaagtcatagtctggcccttggtcggcagaaggga
tacgaggatgaaataatacgttttaagaaggaactgcgtgaacctcagtataaagacgct
gaagaaaagcatagagagatgatgattgtaatgaggactacagagctggccaataaggac
ttagatatttattacaagactttggaccaagctataatgaagtttcacagtatgaaaatg
gaagaaatcaataaaataattcgcgacctctggcgcagcacctacagaggacaagacata
gagtacattgagatcagatcagatgccgatgaaacggtgtctgctgcagataaaagaaga
acttacaactacagggttgtaatgataaaaggagatactgctttggacatgagagggcgc
tgtagtgcaggccaaaaggttctggcctctctcatcattcgtttggcactggcagagaca
ttttgcctgaactgtggaatacttgctctagatgaacctactactaatttagatcgtgaa
aatatagagtctctggcccacgcattggttgagataattaaaagtcgatcaaggcaacgg
aatttccagcttcttgtgatcacacatgacgaagattttgtagagctgctgggacgctct
gagtatgtcgaacatttctataggattaaaaagaatatggatcaatgttctgagatcatg
aaatgcagtatcaactccttgggaaattatgtttactaa
DBGET
integrated database retrieval system
