Dendrobates tinctorius (dyeing poison frog): 141084776
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Entry
141084776 CDS
T11000
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dtc04121
]
141084776 (PDZRN3)
Enzymes [BR:
dtc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141084776 (PDZRN3)
Ubiquitin system [BR:
dtc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
141084776 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
Prok-RING_4
zf-rbx1
Sina_ZnF
zf-TRAF
RING_XB3-XBAT31
TRAF3_RING
TRAF2_zf
Motif
Other DBs
NCBI-GeneID:
141084776
NCBI-ProteinID:
XP_073425790
LinkDB
All DBs
Position
Unknown
AA seq
1055 aa
AA seq
DB search
MGFELDRFIGEVDPDFKCNLCNRVLEDPLTTPCGHVFCAGCVLPWVVQQGSCPVKCQRIS
AKELNHVLPLKNLILKLDIKCDNHSRGCDKVVKLQNLGEHAEMCDYSPAKCRNKGCNEVL
NLKDMDAHMRECCEHRAVGICQKGCGLMLTYREQKSGDHCCLKAVKGQNGLLQTKISGLE
TELKKRALRSGKREKSLLSQLSAVQNELQMTALRYQKKFTEYSARLDSLTKAVASPCKGE
ETTALTLVLHRESGSLGFNIIGGRSCVDNQDGPSSEGIFVSKIVDSGPAAKEGGLQIHDR
IIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMYNAPSDVQMMDTGTQTDIT
FEHIMALTKMNSTSPSVSALDPYLINEEHSSPHEYFDPNDFMGGLPQDIDRDELELEEID
LYRQNSQDKLGLTVCYRTDDEDDMGIYVSEIDPNSIAAKDGRIREGDRIIQINGIDVHNH
EEAVALLTSEDTNVFLLVARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTASM
LQQKKLEEDGGTTDTATILSNQIEKDSGVGRTDESTRNDESSEQDDHTTSSNTLGSQKKL
MYSQDTLGSGDMQFSNESFISADCTDADFLGIPMDECERFRELLELKCQVQSSNQRSRYY
QTSTMDTNRSDQESVDRELEMLNEELHSIELECLNIVRAHKMQQLKEQYRESWMLHNSGF
RNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSLRRTADAA
NCPSVEGAACSAVYSVTQKNLRSSGESRESSPARHLQSAKDSDSSKSTEVKDIKANEVGK
SLSEKQPNSFAPQYRHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCKDL
QNTTEPRMEWKVKVRSDGTRYITKRPVRDKLLRERAIKIKEERSGMTTDDDAISEMKMGR
YWSKEERKQHLRKASEQRKRREFMMQSRLECLKEKQTTDDSKEVSIIDLSHKKMMKKRNK
KIFDNWMTIQELLTHGARSPDGTRVYNSLLSVTTV
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgaattagatcgctttattggggaagtagacccagatttcaaatgcaaccta
tgcaaccgggtgctggaggaccccctgaccaccccctgtggacatgtgttctgcgcaggc
tgcgtcctaccatgggtggtacagcaaggcagctgcccggtgaaatgccaacgaatctcc
gccaaggagctcaaccacgtgttgcccctgaaaaatctcatcctcaagttggatatcaaa
tgtgacaaccactcccggggatgcgacaaggtggtcaagctccaaaatttgggggaacac
gcggagatgtgcgactattcgccagccaagtgccggaataaggggtgcaatgaggtgctc
aacctaaaggacatggacgcccacatgagggagtgctgcgagcaccgggctgttggcatc
tgccagaagggatgcggccttatgttgacttatagggagcaaaaatccggggatcactgt
tgtttgaaggcggtgaaggggcagaatggtcttctccaaactaaaatatccggactggag
accgaactcaagaaaagggcgctgagatcgggcaagagggagaaatctctgctgtcccaa
ctctccgccgttcaaaatgagctgcagatgacagcgcttaggtaccaaaagaagttcacc
gagtacagcgccaggctggactccctcaccaaggcggtggcatcgccttgcaagggagaa
gagacgactgcactcactctcgttctccaccgagaatctggatccctgggatttaatatt
attggtggccggtcgtgtgtggacaaccaggacggaccatccagcgaaggaatttttgtt
tcaaaaatagttgacagcggcccggctgccaaagaaggcggacttcagatccatgaccgg
attattgaggtaaatggaaaagacttatcaagagcgacacatgaccaagcagtggaagcc
tttaaaactgccaaagaacccatcgtggtgcaagttttacgaagaactccacgcacaaag
atgtacaacgccccatccgatgtgcagatgatggacaccgggacacagactgacataact
ttcgagcacattatggccctgactaaaatgaactctacatctccatcagtatctgctctg
gatccatatctcataaatgaagagcattcgtcacctcacgaatattttgaccccaatgac
ttcatgggaggattgcctcaagatattgacagagatgagttggaattggaggagatagac
ctgtacagacagaacagccaggataagctgggcctgacggtgtgctacaggacggatgac
gaggacgacatggggatttatgtcagtgagattgaccccaatagtattgccgctaaagat
ggacggatcagagagggcgatcggatcatacagattaacggcatcgacgttcacaaccac
gaagaagccgtcgccctcctcacaagtgaagacacaaatgttttcctattggtggcgagg
ccagaactacagctggatgaaggatggatggacgatgacagaaatgattttctggatgat
ttgcacatggacatgttggaggaacaacaccaccaagcaatgcaatttacagccagcatg
ctccagcagaaaaaacttgaggaagacggaggaaccacggacacggcaacaattttatcc
aaccagatcgagaaagacagcggcgtggggcgcacggacgaaagcacacgcaacgacgag
agctcggagcaggacgatcacaccacgtcgtccaatacgctcgggagccagaaaaaactc
atgtacagtcaggacacgttgggcagcggagacatgcagttcagcaacgagtccttcatc
tccgcagattgcacggatgccgacttcttgggcatccccatggacgagtgcgaaagattc
cgagagttgctcgaactcaagtgccaggtgcaaagctccaaccaacgaagtagatattac
caaaccagcacgatggacaccaaccggagcgaccaagaaagtgtagaccgggaattggag
atgctgaacgaagagttgcacagcatcgagctcgagtgtctgaacattgtacgggcgcac
aagatgcaacagctaaaagagcaataccgagagtcttggatgttacacaatagcggcttc
cggaattacaacactagtattgacgtccgccgacatgaactttccgatatcaccgaactg
ccagaaaagtcagataaggacagctcaagtgcctacaacaccggggaaagctgtcggagc
accccgctaactttagaaatctcccccgacaactcattgcgtaggacggcagacgctgcc
aactgccccagtgtcgaaggggcagcgtgtagtgccgtttacagtgtgacccagaagaac
ttaagatcaagtggtgaaagtcgagagtccagcccggccaggcacctccaatcggccaag
gactccgactcgagcaaatccacagaagtcaaagacataaaagccaacgaggttggcaaa
agcctctcggaaaagcagccaaactcatttgctccgcagtaccggcactcaccctataaa
catgcccacatccctgcccatgcgcagcactatcaaagttacatgcagctgatccaacag
aaatcggcggtagagtacgcccagagccagatgagtttggtcagcatgtgcaaagacctg
cagaatacgacagaacccaggatggaatggaaagtgaaggtgcggagcgatgggacgcgt
tacatcaccaaacggcccgtccgggacaagttgttgagagaacgcgccataaagatcaaa
gaagagaggagcggcatgacgacggacgatgacgccatcagcgagatgaaaatgggacgt
tattggagcaaggaagaacggaaacaacatctccgtaaagcctcggagcagaggaaaaga
agagagttcatgatgcaaagtaggctggagtgtctgaaggagaaacagaccaccgacgac
agcaaggaagtcagcatcatcgacctgagtcacaaaaagatgatgaagaagcgcaacaaa
aagatttttgacaactggatgacgatacaagaactgttaacccacggggcgaggtctccc
gatgggacgagggtctacaactccctgttgtcagtcacgactgtataa
DBGET
integrated database retrieval system
