Dendrobates tinctorius (dyeing poison frog): 141087637
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Entry
141087637 CDS
T11000
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dtc04121
]
141087637 (PDZRN4)
Enzymes [BR:
dtc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141087637 (PDZRN4)
Ubiquitin system [BR:
dtc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
141087637 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Chp1_domII
Motif
Other DBs
NCBI-GeneID:
141087637
NCBI-ProteinID:
XP_073429360
LinkDB
All DBs
Position
Unknown
AA seq
776 aa
AA seq
DB search
MGCNLCTFQKREEHYKLLYEVSQVNGKDLLKATHDEAVEAFRNAKDPIVVQVLRRTPVNR
ATGSSQEVQLVNVSTQTDITFEHIMALAKLRPTTPPVPDICPFLLSDSCHSLHPMEHEFY
EGNEYLSSLPADGDRTEDFEYEEIELCRLNNKDRLGLTVCYRTDDEEDTGIYVSEVDPDS
IAARDGRIREGDRILQINGQDIQNREEAVALLSNDECRKIVLLVARPDLPMDEGWLDDER
NEFLEELNMQILEEQRHEAMQDPANEVQQQKKPEEEDGTTDTATSSSNNHEKDSGVGRTD
ESLHHDESSEMENIIKDCNITHLQKNTDLRQSQDTLGGSELQCNGSLISGEWIDSDLTVN
QEEECDRFRQLLELKCQIRNRGEYDLYYSSSTIECSRSERGVEHELQLLNEELRSIELEC
QSIMQAHRRKNANNQSGDIWEIHDDEFCNYNTSIEVQRSKVSNVREHTERSDKDSSSAYN
TAESCRSTPLTVDRSPDSSLQRIISITNRKNLRSTIVANHLSSGLSSIENTPSKSKTNEK
TFSTEYQGNMLDYSTFLDHRKRSTEEIPYLSPYHSSAYRHGNIPVHARHYQSYMQLIQQK
SAVECAQSQINLVAMCKESQRSIEPRMEWKVKIRSDGTRYITKRPVRDKLLKERALKIKE
ERSGMTTDDDTMSEMKMGRYWSKEERKQHLMRAKEQRRRREFMMRSRLECLKESPQSGSE
SRKEVSIIELSHKKMMKKRNKKILDNWMTIQELMTHGEKSPDGARVHNAFLSVTTV
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatctgtgcactttccagaagagagaggagcactacaaactgctatatgaa
gtttcccaggttaatgggaaggacctattaaaagcaactcacgacgaagcagttgaagcc
tttcgtaatgctaaagatccaatagttgttcaagtattaagacgaacaccggttaacaga
gcaaccggaagttcccaggaggtgcagcttgtgaatgtgagcactcaaacagacatcaca
ttcgagcatatcatggctcttgccaaactcagaccaaccactccaccagttcctgacatt
tgtccctttcttctatctgacagctgccattctcttcatccaatggagcatgaattttat
gaaggtaatgagtatctttccagtctgcccgctgatggagacagaacggaagactttgag
tatgaggaaattgaactttgtcggctaaacaataaggacagacttggtctaacagtctgc
tacaggacagatgatgaagaggatactggaatatatgttagtgaggttgatccagacagt
attgcagcgagggatggccgcattcgagaaggagacaggatattacagattaatggccaa
gatattcagaacagagaggaagcagtggctctactttccaatgatgaatgcagaaaaatt
gttcttttggttgcaagaccagatttaccgatggatgaaggctggctggatgatgaaagg
aacgaattcttggaagagttaaatatgcaaatactggaggaacagcgtcatgaagcaatg
caagacccagctaatgaagtgcaacagcaaaaaaagccagaggaggaagatggtacgact
gacacagcaacttcatcatccaataaccatgaaaaagacagtggtgtgggtcgcactgat
gaaagcctgcaccatgatgaaagctcagagatggaaaatataatcaaagattgcaacatt
acccatctgcagaaaaatacagaccttagacagagtcaggatacgttaggtggcagtgaa
ctgcaatgcaatggaagtttgatttctggtgaatggatagattctgatctcacggtcaat
caagaagaagagtgtgacaggtttcggcaattgctagagcttaagtgccaaatccggaat
cgaggagaatatgacctgtactattcaagtagcacaattgaatgtagcagatcagagcgt
ggagtagaacatgagttacaacttttaaatgaagagcttagaagtattgaacttgaatgc
cagagcatcatgcaggcgcaccggcgcaaaaatgctaataatcagagtggagacatttgg
gaaattcatgacgatgagttttgtaattataatactagcattgaagtacagagaagtaaa
gtcagtaatgttagggaacatacagagagatctgataaggacagttctagtgcttataac
actgcagaaagctgtagaagcacacctctgacagtagacagatccccggacagctctctt
caaagaattatcagtattacaaatcgtaaaaatctcagaagcactattgttgcaaaccat
ttatcatctggactaagcagtattgagaataccccatccaaatctaaaaccaacgaaaag
acatttagcacagaataccaaggaaatatgctagactacagtacattcttagaccacagg
aaaagaagcactgaagaaattccatacctttccccttatcatagttcagcatatagacat
ggaaatatacctgttcacgcaagacattatcaaagttacatgcagctgatccaacaaaaa
tcagccgtggaatgtgcacaaagtcaaataaatctagttgcaatgtgtaaagaatcacaa
aggtcaatagagccaagaatggaatggaaagtcaaaatcaggagtgatggtacaagatac
attactaaaagaccagtgagggacaaacttcttaaagagcgtgccttaaaaatcaaggaa
gagagaagtggaatgactacagatgatgataccatgagtgagatgaagatgggacgctac
tggagtaaggaggaaagaaagcagcaccttatgagagcaaaagagcaaagacgaagaagg
gaattcatgatgcgtagcaggttggaatgccttaaggaaagtccacagagcggaagtgaa
agtagaaaagaagttagtataattgaactgagtcataaaaaaatgatgaaaaaacgtaac
aaaaagatactggataactggatgacaatccaagaactcatgacacatggagaaaagtct
cctgatggagccagagtacataatgcctttttatcagtcactactgtttga
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