Dendrobates tinctorius (dyeing poison frog): 141088049
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Entry
141088049 CDS
T11000
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1 isoform X1
KO
K10610
DNA damage-binding protein 1
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Pathway
dtc03420
Nucleotide excision repair
dtc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
141088049 (DDB1)
09124 Replication and repair
03420 Nucleotide excision repair
141088049 (DDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dtc04121
]
141088049 (DDB1)
03400 DNA repair and recombination proteins [BR:
dtc03400
]
141088049 (DDB1)
Ubiquitin system [BR:
dtc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
141088049 (DDB1)
DNA repair and recombination proteins [BR:
dtc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
141088049 (DDB1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
141088049 (DDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
141088049
NCBI-ProteinID:
XP_073430013
LinkDB
All DBs
Position
Unknown
AA seq
1142 aa
AA seq
DB search
MSYNYVVTAQKPTAVNACVTGHFTSEDDLNLLIAKNTRLEIYVVTPEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFVLTAKYNACILEYKQTGDSIDIITRAHGNVQVQDRIGRPSET
GIIGIIDPDCRMIGLRLYDGLFKVIPLERDNKELKAFNIRLEELHVIDVKFLYSCQAPTI
CFVYQDPQGRHVKTYEVSLREKEFSKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESIT
YHNGEKYLAIAPPIIKQSTIVCHNRVDVNGSRYLLGDMEGRLFMLLLEKEEQMDGSVTLK
DLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLTADSNEQGSYVVAMETFTNLGP
IVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRVAAS
RQTDDTLVLSFVGQTRVLTLSGEEVEETDLAGFVDDQQTFFCGNVAHQQLIQITSASVRL
VSQDPQSLVSEWKEPQGRKVSVCSCNSRQVLLAVGRVLYYLEIHPGELKQMSCTEMEHEV
ACLDITPLGGNDAMSTLCAIGLWTDISARILSLPGFQLLHKEMLGGEIIPRSILMTSFEN
SHYLLCALGDGALFYFSLNTETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTV
IYSSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLS
ESPRKICYQEVSQCFGVLSSRTEVQDASGGSSPLRPSASTQALSSSVSSSKLFSGSTSPH
ETSFGEEIEVHNLLIIDQHTFEVLHTHQFLQNEYTLSLVSCKLGKDPSTYFVVGTAMVYP
DEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKE
LRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVE
ILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLG
ETSPPTQGSVLFGTVNGMIGLVTSVSESWYNLLLDVQNRLNKVIKSVGKIEHSFWRSFHT
ERKTEAATGFIDGDLIESFLDISRSKMQEVVANLQIDDGSGMKRETTVDDLIKIVEELTR
IH
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacaactacgtggtaactgctcagaagcccacagcggtgaacgcctgtgtgaca
ggacacttcacatctgaagatgacttgaatcttctgatagccaagaacacacgtctggag
atttacgttgtgacaccagaggggctgcgtcctgtaaaggaggttgggatgtatggcaag
atcgcagtaatggagctcttcagacccaagggtgagagtaaagaccttctttttgtactg
actgctaaatacaatgcctgcatcttggagtataagcagactggagacagcattgacatc
atcacccgcgcacatggcaatgttcaggtacaggatcgcattggaagaccttctgaaact
ggaatcatcgggattattgatcctgactgccgcatgatcggattgcgtctttatgatggt
ttatttaaagtaatcccccttgaaagagacaataaggagttgaaagctttcaacatccga
ttggaagagctgcatgtcattgatgtcaagttcctgtatagctgtcaagcccccactatt
tgctttgtgtaccaagatcctcagggccgacatgtaaagacttatgaagtctccctcagg
gaaaaggagtttagcaaaggtccatggaagcaggaaaatgtggaggctgaggcatctatg
gtgatagcagttccagagccttttggaggagccattataatcggtcaggaatctataact
taccacaatggtgagaaatacttggctatagctcctccaattattaagcaaagtacaatt
gtgtgtcataatcgtgtagatgtcaatggctcacgctatcttctcggggacatggaaggt
cgcttgtttatgttactactagagaaggaagagcagatggatggaagtgtcactctcaag
gacctccgagtggaacttttgggggagacctccattgcggaatgtctcacttacttggat
aatggagtagtgtttgtaggctctcgacttggagattcccaactggtaaagcttactgca
gacagcaacgagcagggctcttacgttgtagccatggaaactttcactaacttgggcccc
atcgtggacatgtgtgttgtagaccttgagagacagggccagggccagcttgttacctgc
tctggagcttttaaggaaggttcactaaggattatcagaaatggcattggtatccatgaa
cacgccagcattgacctaccagggatcaaaggtttgtggccgctccgagttgccgccagt
cgtcagacagatgacacattggttttgtcttttgtgggacagaccagagttttgaccttg
tcgggggaagaagtggaggaaacggaccttgccggcttcgttgatgatcagcaaacgttt
ttctgtgggaatgtggcccatcagcagctcattcagatcacatcagcctccgtacgactg
gtgtcgcaggacccccaaagcctggttagcgaatggaaagagccccaaggtcgtaaagtt
agcgtgtgttcctgcaacagccgccaagtactgctggcagtgggcagagtcctctactac
ctggagatccatccaggggagctgaaacagatgagttgcactgaaatggagcatgaagtt
gcctgtctggacatcactcctttgggcggcaatgatgctatgtccacactttgtgcaatc
ggcctatggacagatatttcagcacgaatcctcagtttaccaggatttcagttattacat
aaggagatgttaggtggagagattatcccaaggtccatcctcatgacttcatttgagaac
agtcactacctgctgtgtgcgctgggggatggagcgctcttctatttcagcctcaacaca
gaaactggtcttttgagtgacagaaagaaggtgaccctggggacacagcccactgttttg
aggactttccgatctctgtccacaacaaacgtgtttgcctgttctgaccgtcctacagtc
atctacagtagcaaccacaagctggtcttctccaatgttaacctgaaagaggtcaactat
atgtgccccctgaactctgaaggatatcctgatagtttggccctagcgaataacagcacc
cttaccatcggaaccatcgatgaaatacaaaagcttcatatcagaaccgttccgctgtct
gagtctcccaggaagatttgctatcaggaagtttctcagtgttttggagtgctctccagc
cgaactgaggtgcaagatgctagtggaggcagctctcctcttcgaccaagcgccagtacc
caggccctttcctccagtgtgagcagcagtaagctgttttcaggaagcacatccccccat
gaaacttcctttggagaagaaattgaggtccacaaccttctcatcatcgatcagcacacg
tttgaagtcttgcacactcatcagttcttgcagaatgagtacaccctcagcttagtgtca
tgtaagctgggaaaggatccaagcacttacttcgttgtgggaactgccatggtgtaccca
gacgaggccgaaccaaagcaaggaaggattgtggttttccagtattctgatgggaagctg
cagacggtggccgagaaggaggtcaagggagcggtgtactccatggttgaatttaatgga
aagctcctggccagcatcaacagcaccgtccgactgtatgaatggacagcggagaaagag
ctgcgcacagaatgcaaccattacaacaatatcatggctttatatctgaaaaccaagggc
gattttatcttggtgggagacttgatgcgttcagtgctgttgctggcttataaacccatg
gagggaaactttgaagagattgcccgggattttaaccccaactggatgagcgcagtggag
atactagatgacgataacttcttgggagcagaaaatgcatttaacttatttgtatgccaa
aaagacagtgctgccacgacagatgaggaaagacaacacttacaagaagtcggacttttc
cacttaggggagtttgttaatgtattctgccatggctcgctggtgatgcagaatctcggg
gagacctctcctcctacacaaggctcagtgctgtttggcacagttaatggcatgattggt
ttggtgacgtccgtgtctgagagctggtataacctcctgctagacgttcagaacagactc
aacaaagtcataaagagcgtgggaaagattgagcactctttctggaggtcattccataca
gagagaaagactgaagccgcaaccgggttcatagatggagatcttattgagagctttttg
gatatcagtcggtcaaaaatgcaggaggtggtagcaaatctacagattgatgatggcagc
ggcatgaagagagagaccacagtggatgacctgataaagattgtggaagaactaaccagg
attcactga
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integrated database retrieval system
