Dendrobates tinctorius (dyeing poison frog): 141088718
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Entry
141088718 CDS
T11000
Symbol
CDH23
Name
(RefSeq) cadherin-23 isoform X1
KO
K06813
cadherin 23
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dtc03037
]
141088718 (CDH23)
04515 Cell adhesion molecules [BR:
dtc04515
]
141088718 (CDH23)
Cilium and associated proteins [BR:
dtc03037
]
Primary cilia and associated proteins
USH complex and associated proteins
141088718 (CDH23)
Cell adhesion molecules [BR:
dtc04515
]
Cadherins
Major cadherins
141088718 (CDH23)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
PCDH15_12th
Motif
Other DBs
NCBI-GeneID:
141088718
NCBI-ProteinID:
XP_073431003
LinkDB
All DBs
Position
Unknown
AA seq
3358 aa
AA seq
DB search
MKGHLIFRDPLFFIFLFQSFSVGLAYNRLPFFLNYFFDTYLLINEDTPVGSSITQLRAQD
YDGDKLVYGIVGDEASKFFAVESETGVVWLRQSLDRETKSEFTVEFSVSDSQGVIKGKVS
IQVGDVNDNAPTFHGQPYTVRIAENTPVGTPIYIVNATDPDEGTGGSVLYSIQPPSSEFA
IDRSRGIVTVISPLDYETTVAYQLQVNATDQDKTKPLSTLANLAITITDIQDMDPIFINL
PYSTNIYENSPPGTTIRMITAIDQDRGRPRGIGYTIVSGNTNSIFALDYISGALTLNGQL
DRENPLYTSGFILTVKGTELLDDRSPSDATVKTTFNILVIDINDNAPQFNSSEYTVSIPE
LAQLGFALPLYIQVQDKDEGVNSAFEVYLVGNNSNHFIISPTSVEGKADIRVRVAVPLDY
ETIPRYQFSLFANESVLDHVGFSQVKINLINENDNRPIFSQALYNISLYENVTVGTTILQ
VSATDNDVGTFGKVNYYFSDDPDRFSLDKETGIITLIARLDFETTQRYTITVIARDGGGE
ETTGRVRINVLDVNDNVPIFQKDSYLGAIRENEPSVITVIKLRATDEDSPPNNQITYSII
EASAFRTFFEITISEGYGVITVIRPLDYEQISNGVITLQVMAKDAGVPPLNSTVPVSIEV
FDENDNPPTFSQPSYVITVVENIMAGATVLFLNATDLDRSREFGQESIIYSLDGSPQFRI
NARSGEITTTTLLDRETKSEYILIIRAVDGGVGPNQKIGIATVNITLLDINDNAPQWKDE
PYLINLVEMTPPDSDVTTVVAIDPDLAENGTLVYSINPSNKFYAINSTTGKIRTTGVVLD
RENPNTQEAEMMRRIVISVTDRGRPPLRATSSATVFVNLLDLNDNDPTFQNLPFIAEILE
GTPAGASVFQVVAIDLDEGLNGQVTYRMQVGMPRMDFVINSTSGLVTSTAVLDREGIAEY
YLRVVASDGGSPSKSSTSTLTVRVLDINDETPTFYPALYNISLAENVPRDYIVARLNCSD
ADTGLNAELSYFITGGNQDGKFMVGFRDGILRTVVNLDRETTASYSLILEAIDNGPAGNR
KTGTATVLITVLDINDNKPIFLKSSYEATVPENIPASSSIIQLDATDADEGENGRVWYRI
ISGYTKNFQIDVSTGLLMRGPLALDRETNSSHVLMVEAYNSDQGPMRSSVRVIVYVDDVN
DEIPVFTKQQYSRLELRETVGIGTSVIVVRATDRDTGDGGIVVYNLLSGSDGKFEIDGST
GLLTTIDYLDYETKTSYIMNVSATDQAPPYNRGFCSIYVTLLNEPDEAVQFTSSRYEAVI
VENIATGTEVVRVQARSIDNLNQLTYRFDQNTNAQALALFKIDKITGTITVKGLVDREKG
DFYSLTVVADDGGPKLETTLVQITVLDENDNSPVFDPTSESVVSVAEDCPTGRRIALVLA
RDPDAGVNGQVTFSIVSGNVDRLFEIRITNDTYGEVFLVKPLDRELQEVHSLRIQASDKG
SPPRKTDFTLTVNVVDVNDNPPVIDSPSGYNVSVFENVGGGTSVIRVTATDRDKGLNSVL
SYYITQGNEDLIFRMDRLTGEIATRPSPPDREKQSFYRLMVVVEDEGNPALSATTVVYVT
ILDENDNAPLFERMLYEITLDEGPMTLNSVIITTTAVDHDEGLNGTVTYSIISGNLQNTF
TINNSTGLIRAVKELDYEVCLGRYTLIVTATDRCPILLRRLTSTTTVLVNVIDINDNWPQ
FPKPYEGPFEITEGQPGPRVSTFKAEDKDAGLNGQVEYSIVGGDILGEFVISSVEGDLRV
RKDYELDRENIASYNITIMARDRGTPSFSATTVVEVSVLDINDNDPVLLNLPLNITISEN
TVVSTPITRILASDADTGRNALLTFNITAGNGENAFFINENTGIVYVNRPLDREKVSEYR
LTVTVKDNPENIRNSRKDFDLLIVTISDENDNQPLFSRGSYQAEIMENSPAGTPITVLNG
PILALDNDLGPNAVVSYRLLGLQMDLFTMNSSTGIVAVRSGRIIDREAYSIPILNLTLVA
EDIGKLNSTAALILSILDANDNRPIFSTQTVNVHLRENSPPGFSVVQVTATDADSGPNQQ
LSYRIESGAQDRFLIDAITGVIRVANVTVDREEKDSYRLMVVAADHGTTPLSGSTTVIIL
IDDVNDCPPEFINPVQTVSVLESVAVGTIIAEVTAIDRDLNPRLQYYIIEILATDDTNAV
VPNQQSAFAINFNTGAVMVNSPLDRELVAAYDIAVSVYDNASEVVDRSVSVPNAKLTVNV
LDVNDNTPRFRPFGVTVFSQRIIEGATPGTTLLSVSAVDPDKGLNGLITYSLHNLVPAGY
VQLEDNMAGKIIANRTVDYEQVQWLNFTVRASDNGSPRRSAEIPVHLEIVDINDNNPIFS
QSSYQKQVFEDIQLGSTVLQIKATDADSGRFALIQYSLVDGEGKFGINPTTGDIYILSPL
DREKKDHYTLTAIARDNPGDIASNRRENSVQVLITVLDVNDCRPQFTKSQFSTSVYENEP
EGTSVITMSATDLDEGDNGVVTYNLEGPGSDAFLIDKDSGLITSRRLLQSFERFNLTVVA
TDKGRPPLWGTTMLRVEVIDVNDNRPVFIRPPNGTILHIKEEIPVKSTVYEVYATDNDEG
LNGAVRYSLLRTGAGNKDWEYFSIDSISGLIQTAQRLDRETQAMYNLIIVACDLGQPVSY
ETMLPLQVELDDIDDNEPIFVRPPRGALQYQILSVREHSKPGTLVGNVTGAVDADAGSNA
IVYYFIAAGNEESNFQLFPEGKLTVLKNLDREQNPYYTLIVKASSNRNWSARKAMRAAKI
QSFDPSTDSTLQEVRILLEDINDQPPKFTKSEYTTGVATDAKVGSDLIKVLALDADVGNN
SLVFYTILGIQYIKHNSNNSEAVKNIFVIGNVDGIIRTFDLFTAYSPGYFVVDIMASDLA
GHNDTAIVGIYILRDDQRLKIVINEIPDRVREFEEEFIRLLSNITGAIVNTDDVQFHVDK
KGRVNFAQTDMLIHVVNRDTNRILDVERVIQMIDENKEQLRNLFRNYNVMDVQPATAASA
PEDLSALQMAIIILAILLFLAAMLFIFMNWYYRTVHKRKLKAIVAGSTGNKGFMDILDMP
NTNKYSFEGANPVWLDPFCRNLELAAQAEHEDDLPENLSDITDLWNSPAITHGTFGREPT
ATKPEDDRYLRAAIQEYDNIAKLGQIMREGPIKGSVLKVVLDDYMRLKKLLAQRMVHKAT
TSTGDQSSVTELIQNDLDEDDDQSPRHGSLRFKHKHPVEIKGPDGIHVVHGSTGTLLTSD
INSLPEDDQKGIGRSLETLNTDNCVFIDKNARTESAKSTPMHKLRDTIMESPLEITEL
NT seq
10077 nt
NT seq
+upstream
nt +downstream
nt
atgaagggacacctgattttccgagatcctctcttctttatttttctctttcagtctttc
tctgtgggtttggcttacaacagacttccatttttcttaaactacttctttgatacatac
ttgctaattaatgaagacactcctgttggttcttcaataactcaactacgtgctcaagac
tatgatggtgacaaattggtgtacggaatagtaggtgatgaagccagtaaattttttgct
gtggaaagtgagaccggcgtggtatggctcaggcaatccttggatcgagagactaaatca
gaattcacagttgaattttctgtcagtgacagccagggggttatcaaaggcaaagtaagc
atccaggttggagatgtcaatgacaacgcgcctactttccatggccagccgtatacggtg
cgcattgcagagaacactccagtgggaactccaatttatattgtgaatgctacagatcct
gacgagggaacaggtggaagcgtgttatattccattcagcctccctccagtgaatttgct
atagacaggtcccggggcattgtgactgtcatcagtccgctggactatgaaaccactgtg
gcataccaacttcaggttaatgcaacggatcaagacaagacaaaacccctttcaacgcta
gccaacctcgccattacaatcactgatattcaagacatggacccaattttcattaatttg
ccgtatagcactaacatttatgaaaactctcctccggggacaacgatccgtatgataaca
gcaattgatcaagacagagggcgtcctaggggaattggttacaccatagtttcaggtaac
accaatagtatatttgccttggattatatcagtggcgctttaactctgaatgggcagcta
gaccgggaaaatcctttgtacacatcaggattcatcctaacggttaagggaactgaattg
ctggatgaccgaagcccttctgatgccactgtaaaaactacgttcaacatcctggtgatt
gacatcaatgacaacgctccgcagtttaatagctcagagtacaccgtcagtatcccagag
ttggcccagcttgggtttgcattgcctctgtatattcaggtacaagataaagatgagggt
gtcaacagtgcctttgaagtttaccttgttggaaacaattccaaccactttatcatttct
ccgacttctgtcgaaggaaaggcggatatccgtgtgagagttgctgtaccactggactac
gagacaattccacgctatcaattttcattgtttgcaaatgaaagtgtcttggaccatgtg
ggattttcccaggtgaaaattaacctgatcaacgaaaatgataaccgtcctatcttcagc
caagcgctctacaacatctctttgtatgagaatgttactgtgggaaccacgattctccaa
gtttccgctacagacaatgatgttgggacatttgggaaagtgaattactacttcagtgat
gacccagacaggttttcactcgataaggaaactgggataattacactaattgctcgacta
gattttgagactactcagcgctacaccataacagtgattgccagagatggtggaggtgaa
gaaacgacaggtcgtgtgcgcatcaatgttttggatgttaatgacaatgtacccatcttt
cagaaagattcctaccttggagcaataagagagaatgaaccatctgtgatcacagtgatc
aaacttagggcaaccgatgaggattcccctccaaataatcaaattacttacagcattatt
gaagcttcagcattccgaaccttttttgagatcacaatttctgaaggttatggagtaatc
actgtaattcgacctttggattatgaacaaatttccaatggcgttataacgttacaagtt
atggctaaagacgcaggggtaccgcctttaaacagtacagtacctgttagtattgaagtc
tttgatgaaaatgacaaccctcccacatttagccaaccatcttatgtcattacagtagtg
gaaaacattatggcaggtgctacagtgctgtttttgaatgctacagatttggatcgatcc
agagaatttgggcaggagtctatcatatactccttggatggttcacctcagtttcggatc
aatgcccgatcaggagaaatcactacaacaactctactagatcgggaaactaagtcagaa
tacatcttaattatacgagcagttgatggaggagtgggacccaatcaaaaaattggcatt
gctacagtaaatatcactttgttggacataaatgacaatgctcctcagtggaaagatgaa
ccctaccttataaatctggtagaaatgacaccaccggattcagatgttactacggtggta
gctattgatccagaccttgctgaaaatggcacactggtatacagcatcaacccttcaaac
aagttttatgcaataaatagtacgacaggaaaaatccgtaccactggtgtagtattagac
cgggagaacccaaatacacaagaagcagaaatgatgaggagaattgttatttctgtgact
gaccgtggaagacctccgctccgagccacaagcagtgcgacagtttttgtaaatttgctg
gatcttaatgataatgaccccacctttcagaatttgccattcatcgcagagatcctggag
ggaacgcctgccggagcatctgtattccaggtggtggctattgacctagatgaagggcta
aatggccaagtaacataccgaatgcaggttggaatgccgcgaatggacttcgttataaac
agtacaagtggactggtcacatctacagctgttctagacagagagggaattgcagaatat
tacctccgggtagtagccagtgatggaggatctccatctaaaagttctaccagtactctt
acagttcgtgttctggatatcaacgatgaaacccctactttttatccagctctgtacaac
atttcactggcggaaaatgtaccccgagactacattgtggcacgtctgaattgctcagat
gccgatacaggattaaatgctgaactgagttatttcataacaggtgggaaccaagatggg
aagttcatggttgggtttcgtgatggcattctgagaacagttgtgaatcttgatcgtgag
acaacggcttcttacagtctaatcctagaagctatagacaatggaccagcaggaaatcgg
aaaacaggaacagccactgtcctaatcacagtactggacatcaacgataacaaacccatc
tttttgaaaagtagttatgaagccacagttcctgaaaatatccctgcatccagcagtatc
attcagttggatgccacagatgcagatgagggagaaaacgggcgagtttggtatcgtatt
attagtggatataccaagaatttccaaattgatgtcagtactggactacttatgcgaggc
ccactggctctggacagagaaactaattcctctcatgttttaatggtggaggcatataat
agtgatcaagggccgatgagaagttctgtgagggtgattgtttatgtagatgatgttaat
gatgaaatccctgtattcactaaacagcaatacagtcgtttggaacttcgagaaacggtg
gggattggaacttccgttattgttgttagagctactgatcgggacacaggtgatggtgga
atagtggtgtacaacttgctttcaggttctgatggaaagtttgagattgatggaagcacc
ggtctgctgaccactatcgattaccttgactatgagactaagacaagctacattatgaat
gtgtcagccactgatcaagcgccgccatacaaccgtggtttctgctctatctatgttact
ttgctgaatgagcctgatgaagctgttcagttcactagcagcagatatgaggcagtgatc
gtagaaaacattgccaccggcactgaagtggttcgtgtacaggctcgatcgattgataac
ttaaatcagctcacttatcgatttgaccagaacacaaatgcacaagctttggctcttttc
aaaattgataaaatcacagggacaataactgtgaaaggtttagtggatcgagagaaggga
gacttttattccttaaccgtagtagcagatgatggaggacccaaactggagacaactctg
gttcaaattactgttttagatgagaatgacaatagtccagtatttgatccaacatcagag
tcagtagtgagtgtggccgaggactgtccaacaggcagaagaatagctctagtcttggcc
agagaccctgatgctggagttaatgggcaagtgactttttctatagtcagtggaaatgta
gacagactatttgagatccgtattacgaatgatacctatggagaagttttccttgtgaaa
ccactggacagagaactacaagaagtgcattcattaaggatccaggcgtctgacaaaggt
tctccacctcgaaaaactgattttacattaacagtgaatgttgtggatgtgaatgacaac
ccaccagttattgacagccctagtggttataatgtcagtgtgtttgagaatgttggaggg
ggaacatcagttattagagtgacagcaacagacagggacaaaggactgaacagcgtcctc
tcatattacattacacaaggcaatgaggacctaattttccgcatggacaggctcacaggt
gaaattgccactcgtccatcacctcctgaccgtgaaaaacagagtttctaccgcctcatg
gttgttgtcgaagatgaaggaaaccctgctttatcagcaacaacagtggtttatgtgacc
atcttagatgaaaatgacaatgctcccctgtttgaaagaatgctgtatgaaataaccttg
gatgaaggtccaatgactcttaactcggtcataatcacaactacggctgtggatcatgat
gaaggcctcaatggtactgttacctactcaataataagtggaaacctccagaacacattt
actataaataattctacgggtctgatccgagcagttaaggagctggattatgaagtgtgc
ctgggaagatatacattgattgtaactgccacagacagatgtccaattttgctacgtcgc
ctgacttcaaccactacagtattagtcaatgtaattgacataaatgacaattggccacaa
ttcccaaagccatacgaaggacctttcgagataacagagggacaaccaggtccaagagtt
tcaactttcaaagctgaagacaaagatgcaggtcttaatggtcaagtagaatacagcatt
gttggaggtgatattcttggagagtttgtaatctcatcagttgaaggggatttgagagta
agaaaagactatgaattggatcgagagaatattgcttcctacaacattactattatggca
agagacagaggcactccttctttcagtgctacgactgtggttgaagtaagtgtattagat
atcaatgacaatgatcctgttctcctcaaccttccactaaatataacaatcagtgagaac
actgtggtatcaacaccaatcactagaattcttgctagtgatgctgacactgggcgaaat
gcacttctaactttcaacataactgcagggaatggagagaatgcatttttcatcaatgag
aatactggaatagtttatgtaaatcgacctcttgatcgagagaaagtttcggaatataga
ctaactgtgactgtaaaagacaatccagaaaatatacgcaactcaagaaaggattttgac
ctgttgattgtgacaatatcagatgaaaatgataatcagccattgttttctcgaggatca
tatcaagccgaaattatggagaattcacctgcaggaacacccatcactgtcctcaatggg
cctattttagctttagataatgacttaggacctaatgctgtcgtgtcatatcgacttctg
gggcttcaaatggatttatttaccatgaacagcagcacaggtattgttgctgtgaggtcg
ggaagaattattgatcgagaagcgtactctatccccatcctaaatcttaccctggtggca
gaagatattggcaaattgaacagcacagccgctcttattttatcaatattagatgccaat
gacaacaggcctatctttagtacacaaactgttaatgtgcatctccgggaaaatagtcct
ccaggtttttctgttgtgcaggtgacagccacggatgcggacagtggaccaaaccagcag
ctaagctacagaattgaaagtggtgctcaagataggtttcttattgatgccatcaccggt
gtcatacgtgttgccaatgtgactgtggatagagaagaaaaagattcctataggctgatg
gttgtggccgcagaccacggtaccacgcctttgtctggaagcaccacagtaattatcctg
attgatgatgtgaatgactgcccgccagaattcattaatccggttcaaactgtgagtgtc
ttagagtctgttgccgtgggaacaatcatagccgaggttacagccatcgaccgagacctc
aaccctcgtctgcagtattacattattgaaattctggccacagatgacaccaacgcagtt
gtgccaaatcagcagtctgctttcgctattaacttcaatacaggagcagttatggtaaat
tctcctttagatagagaactagtggctgcatatgatattgctgtctctgtttatgataat
gcaagtgaagtggttgatcgatcagtcagtgtcccaaatgccaaactgacagtcaacgtt
ctggatgtcaatgacaacactcctagatttcgtcccttcggagttaccgttttttctcag
aggataattgaaggtgctaccccaggaaccacactactatcagtgtctgctgttgatcca
gataaaggactcaatggtctgattacttattcgcttcataaccttgtaccagcaggatac
gtccaactcgaagacaatatggcaggaaagattatcgcaaaccgtactgttgactatgag
caggtgcagtggttaaattttactgttcgggcctcagataatggttctcctcgtagatct
gctgagattccagttcaccttgagattgtggatatcaatgacaacaatcctatcttcagc
caatcgtcctatcagaaacaagtattcgaggacattcagcttggttcaacggttcttcag
attaaagcaacagatgcggactctgggcgctttgctctcattcagtacagccttgttgat
ggagagggaaagtttgggataaatcctacaacgggggatatatacatcttatctccactg
gacagagaaaagaaggatcattatactctcactgccattgccagagataatcctggggat
atcgcaagcaaccgccgcgagaactctgtgcaggttcttatcactgtgcttgatgttaat
gactgcagaccgcaattcaccaaaagtcagttcagcactagtgtgtatgagaatgaacca
gaaggcacatctgtgatcactatgtcagccacagacttggacgagggagacaatggtgtg
gtgacatataatttggaaggtcctggttctgatgccttccttattgataaagactctggt
ctgataacatcaagaagacttctgcagtcttttgaacgatttaacttgacagtcgtagca
actgataaaggtagacctcccttatgggggaccaccatgttacgagtggaagtgattgat
gtcaatgataatcgacctgtgttcatccgaccacccaatggcaccattcttcacataaaa
gaggaaattcctgtgaagtctactgtgtatgaagtatatgccactgataacgatgaaggt
ttgaatggggcagtgcgctacagtctactaagaactggagctggaaacaaggattgggaa
tattttagtattgattcaattagtgggcttatccaaacagcacaaagattggatcgggaa
acgcaagccatgtataatctcattatcgttgcctgtgaccttgggcagccggtgtcttat
gaaaccatgctacctcttcaggttgaactagatgatatagatgacaatgagcccatcttt
gtccggcctccgagaggcgctttgcagtatcagattctctcagtccgtgaacactccaaa
cccggaacattggtgggaaatgtcactggtgctgtggatgcagatgcaggatcaaatgct
atagtgtattacttcattgcagctggcaatgaggaaagcaatttccagctatttccagaa
ggaaagctaacggttctgaagaacttggatcgagagcagaacccatattatactctgata
gtgaaagcatcaagcaacaggaattggtcagcccgtaaagcaatgagggctgccaaaatt
caaagctttgatcccagcacagattctacattgcaagaagtgagaatattgcttgaagac
attaatgaccagcctccaaaatttacaaaatctgagtatactacaggtgttgccactgat
gctaaagtgggttctgacctgataaaagttttagcccttgatgccgatgtgggaaacaac
agtttagttttctataccattctcggaatccagtacatcaagcacaactcaaataattct
gaggcagtgaaaaatatttttgtgataggaaatgttgatggtattattcggacctttgac
ttatttactgcctacagtccgggctattttgtggtggacattatggcttctgatctggct
ggacacaatgacactgccattgttggtatttatattttacgagatgaccaacgcttaaag
atagtaattaatgagattccagatcgtgtacgtgagtttgaggaggaatttatacgacta
ctgtccaacatcacaggagccattgtcaatacagatgatgtacagttccatgtagataaa
aaaggcagagtgaattttgcacagaccgacatgctgatacatgtggtaaatcgtgacacc
aacagaattcttgatgttgagcgggttatacagatgattgatgaaaataaagaacaattg
cgtaacctgtttcgcaactacaatgtcatggatgtccaaccagccactgctgccagtgct
ccagaggacctgtctgctttacagatggcaatcattatattggctatcctcctgttcttg
gctgccatgttgtttatctttatgaactggtattatcgaactgtacacaaaaggaagctg
aaagcaatagtggctggctcaacgggaaataaaggttttatggatatcctggatatgccc
aataccaataaatactcttttgaaggtgcaaatcccgtatggttggatccgttctgcaga
aatttggagttggctgcacaagcagaacatgaagatgatttaccagagaacttgagtgac
attacagatctttggaacagcccagccataacacatggaacttttggccgtgaaccaaca
gctacaaaaccagaagatgaccgttaccttcgtgcagcaattcaagagtatgataacatt
gcaaaactggggcagattatgcgtgaaggacctataaagggatcggtactgaaagtagtg
ctggatgattatatgagactgaaaaaattattagcacagagaatggttcataaagccacc
accagcactggcgaccagtcctcggtcacagagttgatccagaatgatttggatgaagat
gatgatcaaagcccaagacatggctcgttgcgtttcaagcacaaacatccagtggaaata
aagggaccagatggaattcatgtggtgcacgggagtactggaacccttttgacttccgac
atcaatagcttaccagaggatgaccaaaagggcatcggacgatcactagagacactaaac
acagacaactgtgttttcattgataaaaatgctcgcacagaatctgcaaaatccacccca
atgcacaagctgagagacaccataatggaaagccctttggaaataacagaattatga
DBGET
integrated database retrieval system
