Dendrobates tinctorius (dyeing poison frog): 141092132
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Entry
141092132 CDS
T11000
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dtc03036
]
141092132 (DICER1)
Chromosome and associated proteins [BR:
dtc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
141092132 (DICER1)
microRNA pathway
RISC loading complex
141092132 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Dicer_PBD
Ribonuclease_3
Dicer_dimer
Ribonucleas_3_3
PAZ
ResIII
Helicase_C
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
141092132
NCBI-ProteinID:
XP_073434169
LinkDB
All DBs
Position
Unknown
AA seq
1847 aa
AA seq
DB search
MAGLQLLTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNTIVCLNSGSGK
TFIAVLLTKELSYQIRGNFHNGAKRTVFLVNSDKQVAQQVSAVRTHSDLKVGEYSSLEIV
EHWSKEKWNEEFVAHQILVMTCHIFLHVLRSESLSLAKINLLVFDECHLAIQDHPYREIM
EIFEGCQTSPRILGLTASILNGKCDPHDLKEKIQKLEEILKSNAETATDLVVLDRYALQP
CEIVLDCGPYHDKSGLYQRLLSELEDALHFLNDCNIPIVSKERDSTSISKQILSDCQAVL
LVLGPWCADKVAGIMVRELQKYIKHEQEDLHRKFLLFTDTILRKIHALCEEHFSPASLDM
RFVTPKVVKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEDEEIEEKE
KTETNFPSPFTNILCGIIFVERRYTAVILNRLIKEAGKQDPELAYISSNFITGHGIGKNQ
PRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQ
SKGRARAPISNYIMLADTNRIKGFEEDLKTYKAIEKILRNKCSKSVDCGDTESDAIVDDD
VLRHNGDSPRATLNDAIGHINRYCARLPSDPFTHLAPKCKTREVSAGLYQSTLYLPINSP
LRAPIVGPTMNCIRLAERAVALICCEMLHQIGELDDHLMPVGKETVKYEEELDLHDEEET
NVPGRPGSTKRRQCYTKAIPECLRNSYPKPGQPCYLYVIGMVLTTPLPDELNFRRRKLYP
PEDSTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKLGFTITLQQLELITRLHQYIF
SHILRLEKPALEFKPMASDSAYCVLPLNVVNDCGTLDIDFKFVEDIEKSEARTGIPTSQY
SAEKPFIFRLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYYKT
KYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV
PELCAIHPIPASLWRKAVCLPSILYRMHCLLTAEELRAQTAIDAGVGVQSLPEDFRYPNL
DFGWKRSIDSKTFISNLNPSTSDALAANHELGAKLEASAENRDQMSVKCPAPCAPSNHQG
PTDPGAINGVSCNGLTNGDGCPEKRLTCCKQLPVQSSTSLTLETLPSKKQTAANSECTVS
DHTKPTSGGSPGPSASTEAAKCEHGTSKGHSSKTLGPNPGLILQALTLSNASDGFNLERL
EMLGDSFLKHGITTYLYCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKCSPSRMVVSIFD
PPVNWLPPGYVVNQDKSSSEKWGSNETASDSVTANGKMDDFDDDEDEDLMWRNPKEEVDF
DDDFLEYDQEHIKFIDSMLMGSGAFVKKIPLTTFSTPDPGFEWKTPKKSSLENSQFSPDL
DDFDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGLESGKQSISYDLHTEQCIADKS
IADCVEALLGCYLTSCGERAAQLFLCSLGLRVLPEIRKRENGSDFSKHSNKASSELSTCK
GVDYGYLKIPPRCMFDHPDAEKTLDHLISGFHNFEKRINYQFKNKAYLLQAFTHASYHYN
TITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYH
KYFKAVSPELFNVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESL
AGAIYMDSGMSLERVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYD
GKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVVSS
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcctgcagctcctgaccccggcctcctcgcccatgggccccttttttggactg
ccctggcagcaggaggcgatccatgataatatatacacccctaggaaatatcaggtggag
ttgttggaggcagcgttggatcacaacacgatagtgtgtctgaactccggctcagggaag
actttcattgccgtactactcactaaggagctgtcctatcagatccggggaaacttccat
aatggtgccaagagaacagtgttcctggtcaattctgataaacaagttgctcagcaagtg
tccgccgttcgcacgcactccgatctgaaggtcggggaatattccagtttagaaattgtg
gaacattggtcgaaggaaaaatggaacgaagaatttgtggctcatcagatcctggttatg
acttgtcacatcttcctccatgtcctgaggagcgagagcctgtccttagccaagatcaac
ctcctggtgttcgatgagtgccacctcgccattcaggatcacccctatcgtgagatcatg
gagatctttgaaggttgtcagacaagtccacgaatcctgggactgactgcttccatactg
aacgggaagtgtgacccccatgacctaaaagagaagatccagaaactggaagagattctg
aagagcaacgccgagactgcgaccgatctggtggtcctagacaggtacgccctgcaacct
tgtgagatcgtactggactgcggcccctatcacgacaaaagcggactctatcagaggctc
ctgtctgagctggaggacgcgcttcacttcctgaatgactgcaatattcccattgtgtct
aaagagcgggattccacatccatctccaaacagattctctcagattgccaggccgtcctg
cttgtcctgggcccgtggtgtgctgataaagttgccgggataatggtgcgagagctgcag
aagtatataaaacacgagcaggaggatctgcaccggaaattcctgctgtttaccgacacc
atcctccggaagatccacgctctgtgcgaggagcacttctcccccgcttccctcgatatg
aggttcgtcaccccgaaagtggtgaagctcctggagatcctgcgaaagtacaagccctac
gagcggcaacagttcgagagcgtggagtggtacaacaaccgcaatcaggacaactacgtg
tcatggagtgactccgaggacgacgatgaagatgaggacgaggagatagaggagaaagag
aagactgagaccaatttcccctccccgttcaccaacatcctgtgtgggatcatcttcgtg
gagcgcagatacaccgccgtcatcctcaatcggttgattaaggaggctgggaagcaggac
cctgagctggcttacattagcagcaactttataactggccacggcattggaaagaaccag
ccccgaaacaagcagatggaagttgagttcagaaagcaggaggaggttctgcgaaagttt
cgagctcacgaaaccaacttgctgatcgccaccagcatcgtggaggaaggcgtggacatc
ccaaagtgcaacttggtggtccgcttcgacctgccaacagagtacaggtcctacgttcag
tctaagggtcgagcccgagcccccatctcaaactacatcatgttagcggacactaatcgg
ataaaggggttcgaagaggatctgaagacctacaaagccatcgaaaagatcctgcggaat
aaatgctccaagtctgtggattgtggagacacggagtctgacgccattgttgacgacgac
gtgttacgtcataatggcgacagcccaagggcgacactgaatgacgccattggccacata
aaccggtattgtgcccggctgcccagtgatccgttcactcacctcgcgcctaagtgtaag
acccgggaggtgtccgctggcctttaccagtccaccctttatctgccgatcaactctccg
ctcagagcccccattgttggcccaaccatgaactgcatcaggctcgctgaacgggcggtg
gccctgatatgctgcgagatgctgcaccagattggtgaactggacgaccatttaatgcca
gtcggcaaagaaactgttaaatacgaggaggagctggatctacacgacgaggaggaaacc
aatgtccctggccgccccggctccaccaagagaaggcagtgctacaccaaggcgatcccc
gagtgtctgcggaatagttatccgaagccgggacagccatgttacctctacgtgataggg
atggtattgacaacccctctcccggacgaactgaacttccggaggaggaagctctaccct
cccgaagactcgactagatgcttcggtatcctgactgccaaacccatacctcagatccca
cacttccccgtctacacccgatctggagaagtgaccatatcgattgagctgaagaagtta
gggtttacaataacgctgcagcagctggagctgatcacccggctacaccagtacatcttc
tctcacatccttcgtcttgagaaacctgcactagagttcaagcccatggcatccgactct
gcctattgcgttctacctctcaatgttgttaatgactgcggcactttggatatagatttt
aagtttgtggaagatatcgagaagtcggaggctcgtaccggcattcccacctctcagtac
tcggccgagaagcctttcatcttcagactagaagattaccaggatgcagtgatcattcca
agatatcgcaattttgaccagcctcatcggttctatgtggctgacgtctacactgacctg
actccactcagtaaattcccttctcccgaatacgaaacgttcgctgaatattataaaaca
aagtacaacctcgacctgacgaacctcaaccaaccgctcctggacgtggaccacacctcg
tcgcgcctgaacctgctgactccgcggcacctgaaccagaaggggaaggctcttccttta
agcagcgcagaaaagcgtaaagcaaagtgggaaagtttacagaacaagcagatcctggtt
ccagaactttgtgccattcatccgatccctgcatcgttgtggaggaaggcggtgtgcctg
ccgagcatcctgtaccgcatgcactgtctgctgaccgccgaggagctgagagcccagacg
gccatcgatgctggcgtcggagtccagtcccttcccgaggacttccgatatcctaatttg
gattttgggtggaaaaggtccatcgatagcaaaacattcatctcgaacctcaacccttcg
acgtccgacgctttggctgcaaaccatgagcttggtgccaaactagaggcttctgcagaa
aaccgtgaccaaatgtctgtgaagtgtccagcaccctgtgcccccagcaaccaccagggg
ccgactgatccaggggccatcaatggcgtctcctgtaacggtctcactaatggtgacggt
tgcccagagaagcgattgacttgctgcaaacaactacctgttcaatcctctacctcatta
acccttgagactttacctagcaagaaacaaaccgcggccaacagcgaatgtactgtgagc
gaccataccaaacctacctcaggtgggagccccggcccctcggccagcacagaagctgca
aagtgcgaacacgggacttccaaagggcactcgtccaagactctggggccaaaccctggt
ctcattctgcaggccctgaccttgtccaacgccagcgacggcttcaacctggagcgtctg
gagatgttgggcgactccttcctgaaacacggcatcaccacctacctgtactgcacctac
cccgacgctcacgagggccgactgtcctatatgaggagcaaaaaggtcagtaactgtaac
ctttaccgactcgggaagaagaaatgctcgccgagccgcatggtggtctccatatttgat
ccacccgtgaactggcttcctcccggatacgttgtgaaccaggataaaagctcctccgag
aagtggggaagtaatgaaactgccagcgatagcgtgaccgccaacggcaagatggatgac
ttcgatgacgatgaggatgaagacctgatgtggaggaaccccaaggaggaggtggacttt
gatgatgactttctggagtacgaccaagagcacataaagttcatcgacagcatgctgatg
ggttccggcgcatttgttaagaagattcctcttacaaccttctccactcctgacccagga
tttgaatggaaaaccccaaaaaaaagctccttggaaaattcccagttctcccctgatctc
gacgactttgattacagttcttgggatgccatgtgctacctagatcccagcaaggctgtg
gaggaggatgactttgtggtggggttttggaatccatctgaagaaaactgtggtttggag
tccgggaagcagtcaatctcttacgacctccacacggagcagtgcattgcggacaagagc
atcgccgactgtgtggaggccttgttgggctgctacctgaccagctgcggagaacgggct
gcccagctcttcctctgttctctcggcctcagagttctccctgagatcaggaaacgggag
aacggcagtgactttagtaagcacagcaacaaggcaagttctgagctttcaacctgcaaa
ggggtggattacggttatctgaaaatacctcccaggtgcatgtttgaccacccagatgct
gagaaaactttggaccacctgatatctgggtttcataattttgagaagagaattaactat
cagtttaaaaataaagcttacctcctccaggccttcacccacgcctcctaccactacaac
accatcactgattgctaccagcgcttagaattcctcggagatgcaattttggactacctc
attactaagcacctttatgaagacccccgccagcactccccgggggtcctcactgacctg
cgctcagctttggtcaataacaccatatttgcttcgctggcggtgaagtacgactaccac
aaatacttcaaggccgtctccccggaactctttaatgtcatagatgactttgtgcagttt
caactggagaagaacgaaatgcaggggatggactcagagctgagacgatcggaggaggat
gaggagaaagaagaagacattgaagtcccaaaggccatgggggacatatttgagtctcta
gcgggagccatatacatggacagcgggatgtcgctggagcgcgtatggcaggtgtattac
cccatgatgagaccattaatagaaaagttttcagcaaatgttccccgatccccggtgcga
gaactgttagaaatggagccagagacggccaaattcagcccggcagagaggacatacgat
ggcaaagttcgcgtcaccgtggaagtcgtcggaaaaggcaaattcaaaggtgtcggcagg
agttacagaattgccaaatctgccgcggctagacgagccctcaggagcctgaaagcaaat
caacctcaagttgtgagcagctga
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integrated database retrieval system
