Dendrobates tinctorius (dyeing poison frog): 141096031
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Entry
141096031 CDS
T11000
Symbol
DDX42
Name
(RefSeq) ATP-dependent RNA helicase DDX42 isoform X1
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
dtc
Dendrobates tinctorius (dyeing poison frog)
Pathway
dtc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141096031 (DDX42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dtc03041
]
141096031 (DDX42)
Enzymes [BR:
dtc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
141096031 (DDX42)
Spliceosome [BR:
dtc03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
141096031 (DDX42)
Complex B
141096031 (DDX42)
Complex C
U2 SnRNP specific factors
141096031 (DDX42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
DUF4238
Motif
Other DBs
NCBI-GeneID:
141096031
NCBI-ProteinID:
XP_073438492
LinkDB
All DBs
Position
Unknown
AA seq
962 aa
AA seq
DB search
MACASIAERSSVMNWNKGGPSSKRGFGFGGFAISTGKKEEPKIPQTSLSAFRGPAPGYGS
ANSSQLPSFYKIGSKRANFDEENAYFDDEEEDSSNVDLPYIPAENSPTRQQLWSKKTDSD
SEEDPLEAFMAEVEDQAARDMRKLEEKEKEKKNARGIRDDIEEEDDQEAYFRYMAENPKA
GLLPEEEEDNLEYDSDGNPIASSTKRIIDPLPPIDHTEIEYAPFEKNFYEEHEEITSLTP
QQIVELRHKLNLRVSGAAPPRPASSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALS
GRDMIGIAKTGSGKTAAFIWPILVHIMDQKELQPGDGPIAVIVCPTRELCQQIHNECKRF
GKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEA
DRMFDMGFEYQVRSIANHVRPDRQTLLFSATFRKKIERLARDILIDPIRVVQGDIGEANE
DITQMVEILSSGPDKWSWLTRRLVEFTSAGSVLLFVTKKANAEELANNLRVEDHPLGLLH
GDMDQSERNKVITDFKKKTIPILVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRT
GRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQYVSKDLLDLAMQNSWFRKSRFKAGKGK
KLNVGGGGLGYRERPGLGAETSERAVSGSVMSNYEAFKPTGGAMGDRLSAMKAAFQSQYK
NHFVAASLSTQKTGTSTINSGAWTSAGSLSSVPSSSPQTHSAPSELMLPMSKGLPGFTSS
GTLSSIPAAYTPMDNPSYPAASQQSNKEGSSSSSSSSSSRESGGSRDKYGESRGRHGDSQ
RHGDGHRHSERDGHRHGDGHRHSSSSRHSESRNGGDGRRDSDGRRESSRDSEGRRESSRD
REESRRDSFGDGRRESSRDGGESRRESSRDGDSRKEGSRDDGKGDTFVVPDPPKRKKSRW
DS
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggcctgtgcttctatcgcagaacgcagctcagtcatgaactggaataaaggcggaccg
agtagcaagcgcggctttggatttgggggatttgccatctctacaggaaagaaggaagaa
ccaaagatcccgcagacatcacttagtgctttccggggtccagctcctggctatggctct
gccaacagctcccagctaccatcgttttacaagattggatctaagagggccaactttgat
gaggagaatgcatactttgatgatgaggaagaagactccagtaatgtagacctgccatac
atcccagcagagaattctccaaccaggcagcaactttggtccaaaaaaacagactcggac
agtgaagaagatcccctagaggcctttatggcagaagtagaggatcaggctgctcgggac
atgagaaaactcgaggaaaaagagaaggagaagaagaatgcaaggggtatcagggatgac
attgaggaagaagatgaccaggaagcctattttcggtacatggcagagaacccaaaggct
gggctcctaccagaagaggaagaagacaaccttgagtatgacagtgatggcaaccctatt
gcctcatccaccaaacgcattattgatcctctgcctcctatagaccatacagagatcgaa
tatgctccttttgagaagaacttctatgaagaacatgaggaaatcacatctctgactcct
cagcagattgtggagctgaggcataagctgaacctgcgggtctccggcgcagccccacca
cgtcctgccagcagctttgctcactttgggtttgatgaacagcttatgcaccagattagg
aagtctgaatacacccagcccacacctatccagtgccagggtgtgccagtggcgcttagt
ggacgagacatgattggcattgccaaaactggaagtggtaagacggcagcgtttatctgg
cctatactagtacatattatggatcagaaggagctacagccaggagacgggcccattgct
gtcatagtatgtcccacacgcgagttgtgccagcagattcacaatgagtgtaaacgattt
ggcaaagcctacaatctacgttctgtggcagtgtacggaggaggcagtatgtgggagcag
gcaaaagctctgcaagaaggagcagaaattgtggtttgtacaccgggacgtcttatagac
catgtgaagaagaaggcaactaacctacagagagtctcctatcttgtgtttgatgaagct
gaccgcatgtttgacatgggttttgaataccaagtacgatccatcgctaatcatgtgaga
ccagaccgacagactttgctcttcagtgccacattccggaagaagattgaaaggctggcc
agggatattctgattgatcccatccgtgttgttcagggtgatattggagaggctaatgag
gacatcactcagatggtggaaattctctcgtctggtccagataagtggagctggctaacc
cgcagactcgtggaattcacatccgcggggagcgtcctcctgtttgtcaccaaaaaagct
aatgctgaagaacttgccaacaacttgcgcgtagaggatcatccattaggtctccttcat
ggagacatggaccagagtgaaaggaacaaggttatcacagacttcaaaaagaagactatt
cccatcctagttgctacagatgttgctgcccgaggtctggatattccatcaatcaaaacc
gtaatcaactacgacgtggcacgagatatcgacactcacactcaccgcattggtcgtacg
ggcagagcgggagaaaagggtgtggcgtatacgttgttaacaccaaaagacagtaacttt
gctggggatctagtgaggaatttggaaggtgccaatcaatatgtttccaaagatttgctg
gatctggcaatgcagaattcttggtttcggaagtcccgatttaaggctgggaaaggcaaa
aaactgaatgtaggtggtggaggactgggctacagagaacgccctggacttggagcagaa
acctctgaacgtgcggtcagcggcagtgtgatgagcaattatgaggccttcaaacctaca
ggaggagcaatgggagatcgactatctgccatgaaggctgcatttcagtcacagtataaa
aatcattttgtggctgccagcttgagcacacagaagacaggaacgtcgaccatcaactct
ggagcttggacaagtgcgggcagcttaagttcggttcccagttcttcaccacagactcat
tcagctccttcggaactgatgcttcccatgtccaaagggttgcctggctttaccagcagt
ggaacccttagtagtatcccagcagcttatacacccatggataatcctagctaccctgca
gccagccagcaaagtaataaggaggggtctagtagcagcagtagtagtagcagcagcagg
gaaagtggtggaagcagagataaatatggtgaaagtaggggaagacatggggatagccag
cggcatggcgatggacaccgccatagtgaacgagatggacaccgccatggagatggacat
cggcattccagcagtagccgacacagtgaaagccgtaatgggggcgatggaagacgagat
agtgacggccgaagggagagttctcgggacagcgaaggaagaagagaaagctcacgagac
agggaagaaagccgaagagacagctttggagatggtcgaagagagagctcccgggatgga
ggagaaagcagaagagagagctcacgagatggagacagtcgtaaagaaggatctcgagat
gatggaaaaggtgacacatttgttgtaccggatcctcccaagcgcaagaagagcagatgg
gacagttga
DBGET
integrated database retrieval system
